TRAF7 (TNF receptor associated factor 7) - Rat Genome Database

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Gene: TRAF7 (TNF receptor associated factor 7) Canis lupus familiaris
Analyze
Symbol: TRAF7
Name: TNF receptor associated factor 7
RGD ID: 12329189
Description: ENCODES a protein that exhibits metal ion binding (inferred); U3 snoRNA binding (inferred); ubiquitin protein ligase activity (inferred); INVOLVED IN apoptotic process (ortholog); cellular response to interleukin-6 (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH adenomatoid tumor (ortholog); autosomal dominant polycystic kidney disease (ortholog); Cardiac, Facial, and Digital Anomalies with Developmental Delay (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: E3 ubiquitin-protein ligase TRAF7
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1638,788,451 - 38,805,666 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl638,788,454 - 38,962,167 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha640,027,602 - 40,044,841 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0639,096,963 - 39,114,204 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl639,096,963 - 39,114,105 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1638,781,803 - 38,799,041 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0638,754,119 - 38,771,345 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0639,232,866 - 39,250,103 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
TRAF7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1638,788,451 - 38,805,666 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl638,788,454 - 38,962,167 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha640,027,602 - 40,044,841 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0639,096,963 - 39,114,204 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl639,096,963 - 39,114,105 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1638,781,803 - 38,799,041 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0638,754,119 - 38,771,345 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0639,232,866 - 39,250,103 (-)NCBIUU_Cfam_GSD_1.0
TRAF7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38162,155,782 - 2,178,129 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl162,155,698 - 2,178,129 (+)EnsemblGRCh38hg38GRCh38
GRCh37162,205,783 - 2,228,130 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36162,145,800 - 2,168,131 (+)NCBINCBI36Build 36hg18NCBI36
Celera162,420,218 - 2,442,550 (+)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef162,132,066 - 2,154,384 (+)NCBIHuRef
CHM1_1162,205,774 - 2,228,103 (+)NCBICHM1_1
T2T-CHM13v2.0162,178,244 - 2,200,598 (+)NCBIT2T-CHM13v2.0
Traf7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391724,727,824 - 24,746,912 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1724,727,536 - 24,746,912 (-)EnsemblGRCm39 Ensembl
GRCm381724,508,850 - 24,527,938 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1724,508,562 - 24,527,938 (-)EnsemblGRCm38mm10GRCm38
MGSCv371724,645,795 - 24,664,883 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361724,236,450 - 24,255,430 (-)NCBIMGSCv36mm8
Celera1725,024,825 - 25,044,110 (-)NCBICelera
Cytogenetic Map17A3.3NCBI
cM Map1712.4NCBI
Traf7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81014,038,117 - 14,056,832 (-)NCBIGRCr8
mRatBN7.21013,533,570 - 13,552,290 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1013,533,570 - 13,552,203 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1018,280,130 - 18,298,622 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01017,768,975 - 17,787,467 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01013,268,162 - 13,286,654 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01013,874,444 - 13,893,090 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1013,874,456 - 13,892,997 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01013,691,429 - 13,710,062 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41013,760,687 - 13,779,228 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1013,213,849 - 13,232,354 (-)NCBICelera
Cytogenetic Map10q12NCBI
Traf7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544215,092,955 - 15,112,840 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544215,092,955 - 15,112,842 (-)NCBIChiLan1.0ChiLan1.0
TRAF7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2182,658,025 - 2,679,959 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1166,439,363 - 6,460,772 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0161,013,831 - 1,036,486 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1162,266,213 - 2,279,031 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl162,266,194 - 2,279,031 (+)Ensemblpanpan1.1panPan2
Traf7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344104,822,976 - 104,841,154 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366941,868,309 - 1,886,772 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TRAF7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl339,810,606 - 39,828,395 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1339,811,803 - 39,828,450 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2342,353,140 - 42,369,754 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TRAF7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.152,051,247 - 2,072,763 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl52,059,349 - 2,071,297 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606828,989,286 - 29,010,804 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Traf7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462491379,423 - 100,279 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462491379,423 - 100,301 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in TRAF7
123 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 22 6 6 6 6 2 12 10 6
Low 4 8
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005621726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005621727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005621728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022420243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022420244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038549753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038549764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_846922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00845008398   ⟹   ENSCAFP00845006610
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl639,096,963 - 39,108,997 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845008416   ⟹   ENSCAFP00845006626
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl639,096,971 - 39,114,105 (-)Ensembl
RefSeq Acc Id: XM_005621726   ⟹   XP_005621783
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1638,788,451 - 38,800,348 (-)NCBI
Dog10K_Boxer_Tasha640,027,602 - 40,039,504 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005621728   ⟹   XP_005621785
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1638,788,451 - 38,805,660 (-)NCBI
Dog10K_Boxer_Tasha640,027,602 - 40,044,790 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022420244   ⟹   XP_022275952
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1638,788,451 - 38,800,348 (-)NCBI
Dog10K_Boxer_Tasha640,027,602 - 40,039,504 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038479474   ⟹   XP_038335402
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1638,781,803 - 38,791,413 (-)NCBI
RefSeq Acc Id: XM_038479475   ⟹   XP_038335403
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1638,781,803 - 38,791,413 (-)NCBI
RefSeq Acc Id: XM_038479476   ⟹   XP_038335404
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1638,781,803 - 38,799,041 (-)NCBI
RefSeq Acc Id: XM_038479477   ⟹   XP_038335405
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1638,781,803 - 38,793,705 (-)NCBI
RefSeq Acc Id: XM_038479478   ⟹   XP_038335406
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1638,781,803 - 38,793,705 (-)NCBI
RefSeq Acc Id: XM_038479479   ⟹   XP_038335407
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1638,781,803 - 38,798,990 (-)NCBI
RefSeq Acc Id: XM_038540732   ⟹   XP_038396660
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0639,232,866 - 39,242,477 (-)NCBI
RefSeq Acc Id: XM_038540733   ⟹   XP_038396661
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0639,232,866 - 39,242,477 (-)NCBI
RefSeq Acc Id: XM_038540734   ⟹   XP_038396662
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0639,232,866 - 39,250,103 (-)NCBI
RefSeq Acc Id: XM_038540735   ⟹   XP_038396663
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0639,232,866 - 39,244,771 (-)NCBI
RefSeq Acc Id: XM_038540736   ⟹   XP_038396664
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0639,232,866 - 39,244,771 (-)NCBI
RefSeq Acc Id: XM_038540737   ⟹   XP_038396665
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0639,232,866 - 39,250,052 (-)NCBI
RefSeq Acc Id: XM_038549753   ⟹   XP_038405681
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha640,027,602 - 40,037,212 (-)NCBI
RefSeq Acc Id: XM_038549764   ⟹   XP_038405692
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha640,027,602 - 40,037,212 (-)NCBI
RefSeq Acc Id: XM_038604853   ⟹   XP_038460781
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0638,754,119 - 38,771,345 (-)NCBI
RefSeq Acc Id: XM_038604854   ⟹   XP_038460782
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0638,754,119 - 38,766,016 (-)NCBI
RefSeq Acc Id: XM_038604855   ⟹   XP_038460783
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0638,754,119 - 38,771,345 (-)NCBI
RefSeq Acc Id: XM_038604856   ⟹   XP_038460784
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0638,754,119 - 38,766,016 (-)NCBI
RefSeq Acc Id: XM_038604857   ⟹   XP_038460785
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0638,754,119 - 38,771,294 (-)NCBI
RefSeq Acc Id: XM_038669537   ⟹   XP_038525465
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0639,096,963 - 39,106,578 (-)NCBI
RefSeq Acc Id: XM_038669538   ⟹   XP_038525466
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0639,096,963 - 39,106,578 (-)NCBI
RefSeq Acc Id: XM_038669539   ⟹   XP_038525467
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0639,096,963 - 39,114,204 (-)NCBI
RefSeq Acc Id: XM_038669540   ⟹   XP_038525468
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0639,096,963 - 39,108,871 (-)NCBI
RefSeq Acc Id: XM_038669541   ⟹   XP_038525469
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0639,096,963 - 39,108,871 (-)NCBI
RefSeq Acc Id: XM_038669542   ⟹   XP_038525470
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0639,096,963 - 39,114,153 (-)NCBI
RefSeq Acc Id: XM_846922   ⟹   XP_852015
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1638,788,451 - 38,805,666 (-)NCBI
Dog10K_Boxer_Tasha640,027,602 - 40,044,841 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005621783 (Get FASTA)   NCBI Sequence Viewer  
  XP_005621785 (Get FASTA)   NCBI Sequence Viewer  
  XP_022275952 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335402 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335403 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335404 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335405 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335406 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335407 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396660 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396661 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396662 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396663 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396664 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396665 (Get FASTA)   NCBI Sequence Viewer  
  XP_038405681 (Get FASTA)   NCBI Sequence Viewer  
  XP_038405692 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460781 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460782 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460783 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460784 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460785 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525465 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525466 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525467 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525468 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525469 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525470 (Get FASTA)   NCBI Sequence Viewer  
  XP_852015 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000028710.4
  ENSCAFP00000061276.2
  ENSCAFP00030000722.1
  ENSCAFP00030000731.1
  ENSCAFP00040000335.1
  ENSCAFP00040000371.1
  ENSCAFP00040000426.1
  ENSCAFP00040000434.1
  ENSCAFP00040000485.1
  ENSCAFP00040000496.1
  ENSCAFP00845006610
  ENSCAFP00845006610.1
  ENSCAFP00845006626
  ENSCAFP00845006626.1
RefSeq Acc Id: XP_005621785   ⟸   XM_005621728
- Peptide Label: isoform X5
- UniProtKB: A0A8I3MXE0 (UniProtKB/TrEMBL),   A0A8P0SNT7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_852015   ⟸   XM_846922
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LX00 (UniProtKB/TrEMBL),   A0A8C0LQV6 (UniProtKB/TrEMBL),   A0A8I3MVB6 (UniProtKB/TrEMBL),   A0A8I3MXE0 (UniProtKB/TrEMBL),   A0A8P0SNT7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005621783   ⟸   XM_005621726
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LX00 (UniProtKB/TrEMBL),   A0A8C0LQV6 (UniProtKB/TrEMBL),   A0A8I3MVB6 (UniProtKB/TrEMBL),   A0A8I3MXE0 (UniProtKB/TrEMBL),   A0A8P0SNT7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022275952   ⟸   XM_022420244
- Peptide Label: isoform X4
- UniProtKB: A0A8I3MXE0 (UniProtKB/TrEMBL),   A0A8P0SNT7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038335404   ⟸   XM_038479476
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038335407   ⟸   XM_038479479
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038335406   ⟸   XM_038479478
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038335405   ⟸   XM_038479477
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038335403   ⟸   XM_038479475
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038335402   ⟸   XM_038479474
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038460783   ⟸   XM_038604855
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038460781   ⟸   XM_038604853
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038460785   ⟸   XM_038604857
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038460784   ⟸   XM_038604856
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038460782   ⟸   XM_038604854
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038525467   ⟸   XM_038669539
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LX00 (UniProtKB/TrEMBL),   A0A8C0LQV6 (UniProtKB/TrEMBL),   A0A8I3MVB6 (UniProtKB/TrEMBL),   A0A8I3MXE0 (UniProtKB/TrEMBL),   A0A8P0SNT7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525470   ⟸   XM_038669542
- Peptide Label: isoform X5
- UniProtKB: A0A8I3MXE0 (UniProtKB/TrEMBL),   A0A8P0SNT7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525469   ⟸   XM_038669541
- Peptide Label: isoform X4
- UniProtKB: A0A8I3MXE0 (UniProtKB/TrEMBL),   A0A8P0SNT7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525468   ⟸   XM_038669540
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LX00 (UniProtKB/TrEMBL),   A0A8C0LQV6 (UniProtKB/TrEMBL),   A0A8I3MVB6 (UniProtKB/TrEMBL),   A0A8I3MXE0 (UniProtKB/TrEMBL),   A0A8P0SNT7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525466   ⟸   XM_038669538
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PM28 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525465   ⟸   XM_038669537
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PM28 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038405692   ⟸   XM_038549764
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PM28 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038405681   ⟸   XM_038549753
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PM28 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396662   ⟸   XM_038540734
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LQV6 (UniProtKB/TrEMBL),   A0A8C0LX00 (UniProtKB/TrEMBL),   A0A8I3MVB6 (UniProtKB/TrEMBL),   A0A8I3MXE0 (UniProtKB/TrEMBL),   A0A8P0SNT7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396665   ⟸   XM_038540737
- Peptide Label: isoform X5
- UniProtKB: A0A8I3MXE0 (UniProtKB/TrEMBL),   A0A8P0SNT7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396664   ⟸   XM_038540736
- Peptide Label: isoform X4
- UniProtKB: A0A8I3MXE0 (UniProtKB/TrEMBL),   A0A8P0SNT7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396663   ⟸   XM_038540735
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LQV6 (UniProtKB/TrEMBL),   A0A8C0LX00 (UniProtKB/TrEMBL),   A0A8I3MVB6 (UniProtKB/TrEMBL),   A0A8I3MXE0 (UniProtKB/TrEMBL),   A0A8P0SNT7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396661   ⟸   XM_038540733
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PM28 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396660   ⟸   XM_038540732
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PM28 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845006610   ⟸   ENSCAFT00845008398
RefSeq Acc Id: ENSCAFP00845006626   ⟸   ENSCAFT00845008416

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000019418 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030000507 UniProtKB/TrEMBL
  ENSCAFG00040000248 UniProtKB/TrEMBL
  ENSCAFG00845004697 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000030876.5 UniProtKB/TrEMBL
  ENSCAFT00000066928.2 UniProtKB/TrEMBL
  ENSCAFT00030000839.1 UniProtKB/TrEMBL
  ENSCAFT00030000849.1 UniProtKB/TrEMBL
  ENSCAFT00040000416.1 UniProtKB/TrEMBL
  ENSCAFT00040000454.1 UniProtKB/TrEMBL
  ENSCAFT00040000518.1 UniProtKB/TrEMBL
  ENSCAFT00040000528.1 UniProtKB/TrEMBL
  ENSCAFT00040000587.1 UniProtKB/TrEMBL
  ENSCAFT00040000599.1 UniProtKB/TrEMBL
  ENSCAFT00845008398 ENTREZGENE
  ENSCAFT00845008398.1 UniProtKB/TrEMBL
  ENSCAFT00845008416 ENTREZGENE
  ENSCAFT00845008416.1 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/TrEMBL
  3.30.40.10 UniProtKB/TrEMBL
InterPro G-protein_beta_WD-40_rep UniProtKB/TrEMBL
  Haem_d1_sf UniProtKB/TrEMBL
  Quinoprotein_ADH-like_supfam UniProtKB/TrEMBL
  SSU_processome_Utp13 UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/TrEMBL
  WD40_repeat UniProtKB/TrEMBL
  WD40_repeat_CS UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/TrEMBL
  Znf-RING_euk UniProtKB/TrEMBL
  Znf_C3HC4_RING-type UniProtKB/TrEMBL
  Znf_RING UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
  Znf_RING_CS UniProtKB/TrEMBL
  Znf_TRAF UniProtKB/TrEMBL
KEGG Report cfa:609824 UniProtKB/TrEMBL
NCBI Gene TRAF7 ENTREZGENE
PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRAF7 UniProtKB/TrEMBL
  TRANSDUCIN BETA-LIKE 3 UniProtKB/TrEMBL
  TRANSDUCIN BETA-LIKE PROTEIN 3 UniProtKB/TrEMBL
  WD40 REPEAT PROTEIN UniProtKB/TrEMBL
Pfam Utp13 UniProtKB/TrEMBL
  WD40 UniProtKB/TrEMBL
  zf-C3HC4 UniProtKB/TrEMBL
  zf-RING_UBOX UniProtKB/TrEMBL
PRINTS GPROTEINBRPT UniProtKB/TrEMBL
PROSITE WD_REPEATS_1 UniProtKB/TrEMBL
  WD_REPEATS_2 UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/TrEMBL
  ZF_RING_1 UniProtKB/TrEMBL
  ZF_RING_2 UniProtKB/TrEMBL
  ZF_TRAF UniProtKB/TrEMBL
SMART RING UniProtKB/TrEMBL
  WD40 UniProtKB/TrEMBL
Superfamily-SCOP RING/U-box UniProtKB/TrEMBL
  SSF50978 UniProtKB/TrEMBL
  SSF50998 UniProtKB/TrEMBL
  SSF51004 UniProtKB/TrEMBL
  TRAF domain-like UniProtKB/TrEMBL
UniProt A0A8C0LQV6 ENTREZGENE
  A0A8C0LX00 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PM28 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PP79_CANLF UniProtKB/TrEMBL
  A0A8C0PPX5_CANLF UniProtKB/TrEMBL
  A0A8C0PTS4_CANLF UniProtKB/TrEMBL
  A0A8C0RUM8_CANLF UniProtKB/TrEMBL
  A0A8I3MVB6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MXE0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SNT7 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:47770 ENTREZGENE