LINGO3 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 20 | 56,755,986 - 56,757,919 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 56,551,520 - 56,555,841 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 57,489,312 - 57,493,633 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 57,479,171 - 57,493,653 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 20 | 56,541,372 - 56,545,693 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 57,026,564 - 57,030,880 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 57,226,955 - 57,231,276 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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LINGO3 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 19 | 2,287,164 - 2,308,154 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 19 | 2,287,164 - 2,308,154 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 19 | 2,287,163 - 2,308,153 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 19 | 2,240,774 - 2,259,156 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 19 | 2,240,998 - 2,243,023 | NCBI | | | | | Celera | 19 | 2,223,699 - 2,242,250 (-) | NCBI | | Celera | | | Cytogenetic Map | 19 | p13.3 | NCBI | | | | | HuRef | 19 | 2,061,655 - 2,063,324 (-) | NCBI | | HuRef | | | CHM1_1 | 19 | 2,289,362 - 2,307,712 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 19 | 2,260,807 - 2,281,793 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Lingo3 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 10 | 80,668,635 - 80,679,873 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 80,668,635 - 80,679,873 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 10 | 80,832,801 - 80,844,039 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 80,832,801 - 80,844,039 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 10 | 80,295,546 - 80,306,784 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 80,235,930 - 80,247,159 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 81,851,599 - 81,862,837 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | C1 | NCBI | | | | | cM Map | 10 | 39.72 | NCBI | | | | |
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Lingo3 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 7 | 9,519,252 - 9,530,675 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 8,869,025 - 8,878,431 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 8,869,025 - 8,878,431 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 11,753,044 - 11,762,461 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 13,628,548 - 13,637,965 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 11,495,081 - 11,504,496 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 11,737,293 - 11,746,703 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 11,737,293 - 11,746,703 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 11,905,008 - 11,914,418 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 10,379,660 - 10,389,070 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 7 | 7,053,134 - 7,062,544 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | q11 | NCBI | | | | |
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Lingo3 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955495 | 5,860,126 - 5,861,939 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955495 | 5,850,956 - 5,862,249 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LINGO3 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 20 | 6,672,881 - 6,691,244 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 19 | 5,902,227 - 5,920,590 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 19 | 1,299,345 - 1,317,706 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | |
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Lingo3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405118 | 216,461,823 - 216,466,729 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936588 | 1,369,707 - 1,371,485 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936588 | 1,368,048 - 1,372,364 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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LINGO3 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 2 | 76,264,071 - 76,280,623 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 76,264,077 - 76,280,627 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 76,825,890 - 76,843,050 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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LINGO3 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 6 | 2,081,234 - 2,103,094 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 6 | 2,082,224 - 2,084,002 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666081 | 6,609,756 - 6,628,671 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Lingo3 (Heterocephalus glaber - naked mole-rat) |
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