POLD2 (DNA polymerase delta 2, accessory subunit)

Gene: POLD2 (DNA polymerase delta 2, accessory subunit) Canis lupus familiaris

Analyze

Symbol:

POLD2

Name:

DNA polymerase delta 2, accessory subunit

RGD ID:

12327248

Description:

ENCODES a protein that exhibits DNA binding (inferred); INVOLVED IN DNA replication (ortholog); DNA-templated DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH genetic disease (ortholog); pleomorphic xanthoastrocytoma (ortholog); FOUND IN delta DNA polymerase complex (ortholog); zeta DNA polymerase complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

DAN polymerase delta 2, accessory subunit; DNA polymerase delta subunit 2; polymerase (DNA directed), delta 2, accessory subunit; polymerase (DNA directed), delta 2, regulatory subunit 50kDa

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Dog10K_Boxer_Tasha	16	2,054,909 - 2,062,351 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	14,799,626 - 14,807,063 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	14,799,229 - 14,807,248 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UNSW_CanFamBas_1.0	16	14,430,844 - 14,438,274 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	14,411,321 - 14,418,752 (+)	NCBI		UU_Cfam_GSD_1.0

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

pleomorphic xanthoastrocytoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA biosynthetic process (IEA)

DNA metabolic process (IEA)

DNA replication (IEA,ISO)

DNA strand elongation involved in DNA replication (IEA)

DNA-templated DNA replication (IEA,ISO)

error-prone translesion synthesis (IEA)

Cellular Component

delta DNA polymerase complex (IEA,ISO)

nucleoplasm (IEA)

nucleus (IEA)

zeta DNA polymerase complex (IEA,ISO)

Molecular Function

DNA binding (IEA)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

mismatch repair pathway (ISO)

nucleotide excision repair pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

POLD2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Dog10K_Boxer_Tasha	16	2,054,909 - 2,062,351 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	14,799,626 - 14,807,063 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	14,799,229 - 14,807,248 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UNSW_CanFamBas_1.0	16	14,430,844 - 14,438,274 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	14,411,321 - 14,418,752 (+)	NCBI		UU_Cfam_GSD_1.0

POLD2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	44,114,680 - 44,124,325 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	44,114,631 - 44,124,358 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	44,154,279 - 44,163,147 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	44,120,812 - 44,129,655 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	43,927,526 - 43,936,370	NCBI
Celera	7	44,252,240 - 44,261,103 (-)	NCBI		Celera
Cytogenetic Map	7	p13	NCBI
HuRef	7	44,039,545 - 44,048,437 (-)	NCBI		HuRef
CHM1_1	7	44,158,128 - 44,167,020 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	7	44,273,211 - 44,282,858 (-)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	44,193,774 - 44,202,666 (-)	NCBI

Pold2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	5,822,180 - 5,828,256 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	5,822,180 - 5,828,292 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	5,872,180 - 5,878,256 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	5,872,180 - 5,878,292 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	5,772,183 - 5,778,259 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	5,772,191 - 5,778,220 (-)	NCBI		MGSCv36	mm8
Celera	11	6,363,816 - 6,369,891 (-)	NCBI		Celera
Cytogenetic Map	11	A1	NCBI
cM Map	11	3.88	NCBI

Pold2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	84,962,933 - 84,969,148 (-)	NCBI		GRCr8
mRatBN7.2	14	80,748,971 - 80,755,188 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	80,748,974 - 80,755,160 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	85,151,054 - 85,157,217 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	86,391,142 - 86,397,305 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	82,840,464 - 82,846,627 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	86,111,416 - 86,117,578 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	86,111,294 - 86,117,578 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	86,802,860 - 86,809,022 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	86,535,757 - 86,541,920 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	86,554,903 - 86,561,065 (-)	NCBI
Celera	14	79,633,799 - 79,639,962 (-)	NCBI		Celera
Cytogenetic Map	14	q21	NCBI

Pold2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955456	7,853,476 - 7,860,108 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955456	7,853,476 - 7,860,108 (+)	NCBI	ChiLan1.0	ChiLan1.0

POLD2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	49,026,199 - 49,035,160 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	97,350,939 - 97,359,900 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	44,829,040 - 44,837,928 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	44,896,320 - 44,906,084 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	44,896,320 - 44,905,393 (-)	Ensembl	panpan1.1		panPan2

Pold2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	99,863,137 - 99,872,322 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936478	19,072,810 - 19,083,669 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936478	19,074,871 - 19,083,624 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

POLD2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	51,038,358 - 51,046,779 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	18	51,038,272 - 51,046,782 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	55,932,004 - 55,940,477 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

POLD2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	14,544,083 - 14,553,315 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	14,545,986 - 14,553,217 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666062	7,961,746 - 7,970,661 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pold2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624740	7,901,075 - 7,908,014 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624740	7,901,029 - 7,907,746 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	5	5	22	6	6	6	6	6	12	8	10	6
Low
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022416523	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038452575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038452576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038452577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038452578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038525247	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038525248	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038525249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038525250	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038525251	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038559576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038559577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038559578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038559579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038559580	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038623576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038623577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038623578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038623579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038623580	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038689309	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038689310	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038689311	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038689312	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038689313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000104	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000041	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00845010350 ⟹ ENSCAFP00845008046

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	16	14,799,229 - 14,807,060 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845010393 ⟹ ENSCAFP00845008076

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	16	14,799,750 - 14,807,209 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845010404 ⟹ ENSCAFP00845008084

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	16	14,800,080 - 14,807,248 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845010433 ⟹ ENSCAFP00845008109

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	16	14,800,080 - 14,807,248 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845010471 ⟹ ENSCAFP00845008139

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	16	14,800,460 - 14,807,248 (+)	Ensembl

RefSeq Acc Id:

XM_022416523 ⟹ XP_022272231

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	16	2,054,909 - 2,060,697 (-)	NCBI

Sequence:

show sequence

TGAGCTTTCCCTAGAAGCCTTGGGAGAGTCAGCCTCTTCGAGCCTTCACTTCTTGTTCGTAACA
AATCCTTGTTACGAGGATTAAATGAAGGAATTGGTGGTTTTCAAGGGAGGCTAGGTGAGCTGAG
GCTTAGTTCTGGCAGGAACAGTGATCGTGTCATTGCTGTAGGGATGTCCTGTGTGCTGGCGATG
TGCTTGTGTGCGCACACGTGGCCAGCCAGTATGTCAGCATGCAGACCAGGAACCGGGCCCTGGG
GGCCAAGGTCCACAAACACCTGTGTCCCCCCGGGGGGGCTCCCTGAGTGCTCACTATGTCTTCT
GCTGCCCCTCCGGGCCCTCCGTCCTGGTCGGCACGAATCTCCCCTCCCTTGGGCTCCTCTGTCT
TTCCTAACCCAGGGGCCTGGGCAGGGTGACGTCTTCTTTCTCCACCTCCTTCGTCCTCCACCTC
TCCTCTCACATGATTCCCCCCGGGGGAACAGGACGCGTGCCTTCACCTTTCTGGGGCCGCGTTC
CCCGTCTCACTGTGGATCCAAGTGGCTCTCCGTGCCAAGTTCAGTTCATCTGAAATGTTTATGG
GGAGAACCGTGTTACCCCTCCACATCTGTTGGTCCCAGCCTTGGCCTCCCCGGCTCCAGGTCCG
GTCGCGACTGTGGGGAGCAGTGGTGCTCAGGCCCATCCCACACCAGCGACAGACTCGACCCTGG
TTTATTACAGGCCGTGAAGACAGCCAGACCTCAGGTGATGGAATCCAAATAAAGAAGCTATGTG
AGCTGCAGCCTGGGGAGAAATGCTGTGTGGTGGGGACCCTCTTCAAGGCCATGCCACTTCAGCC
ATCCATCCTCCGGGAGATCAGCGAAGAGCACAACCTGCTGCCGCAGCCTCCTCGGAGCAAGTAC
ATCCATCCCGACGACCAGCTGGTCTTGGAAGATGAACTACAGCGCATTAAGCTGGAAGGCAGCA
TTGACGCGTCAAAGCTGGTCACAGGGACAGTGCTGGCTGTGCTTGGCTCTGTGAGAGACAGCGG
GAAGTTCCTGGTGGAGGACCATTGCTTTGCAGAGCTTGCTCCTCAGAAGCCCGCACCCACCCTG
GACACAGACAGGTTTGTGCTGCTGGTGTCTGGCCTGGGCCTGGGCGGAGGCGGGGGTGAGAGCC
TGCTGGGCACCCAGCTGCTGGTGGACGTGGTGACAGGGCAGCTGGGGGACGAGGGAGAGCAGTG
TAGCGCCGCCCATGTGTCCCGGGTCATCCTCGCCGGGAACCTCCTGAGCCACAATACCCAGAGC
AGAGATTCCATCAACAAGGCCAAGTACTTAACCAAGAAAACCCAGGCAGCCAGCGTGGAGGCGG
TCAAAATGTTGGATGAGATCCTCCTGCAACTGAGTGCATCGGTACCCGTGGACGTGATGCCAGG
CGAATTTGACCCAACCAACTACACACTCCCTCAGCAGCCCCTGCACCCCTGCATGTTCCCACTG
GCCACTGCCTATTCCACCCTCCAGCTGGTCACCAATCCCTACCAAGCCACCATCGATGGAGTCA
GATTCCTAGGGACATCGGGACAAAACGTGAGTGACATTTTCCGGTACAGTAGCATGGAGGATCA
CTTGGAGATCCTGGAGTGGACCCTGCGCATCCGTCACATCAGCCCCACAGCCCCTGATACGCTA
GGTTGCTACCCCTTCTATAAGAACGACCCGTTCATCTTTCCGGACTGCCCTCACGTCTACTTTT
GTGGGAACACCCCCCAGTTTGGCTCTAAAATTTTCCGAGGCCCAGAGGACCAGAGGGTGCTGTT
GGTGGCTGTCCCAGACTTCAGCACCACACAGACTGCCTGCCTTGTGAATCTGCGCAGCTTGGCC
TGCCAGCCCATCAGTTTCTCAGGCTTTGGGGCAGAGGACGAGGACCTGGGGGGCTTGGGTCTGA
GCCCCTGACTCACTGAGACCCGTGCAACGTTGACACTGAGGTGGCATTTGCTTTATAACAAAAG
CCTGAAGAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_038452575 ⟹ XP_038308503

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	16	2,054,909 - 2,062,351 (-)	NCBI

RefSeq Acc Id:

XM_038452576 ⟹ XP_038308504

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	16	2,054,909 - 2,062,227 (-)	NCBI

RefSeq Acc Id:

XM_038452577 ⟹ XP_038308505

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	16	2,054,909 - 2,061,712 (-)	NCBI

RefSeq Acc Id:

XM_038452578 ⟹ XP_038308506

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	16	2,054,909 - 2,061,612 (-)	NCBI

RefSeq Acc Id:

XM_038559576 ⟹ XP_038415504

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	16	14,411,321 - 14,418,752 (+)	NCBI

RefSeq Acc Id:

XM_038559577 ⟹ XP_038415505

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	16	14,411,445 - 14,418,752 (+)	NCBI

RefSeq Acc Id:

XM_038559578 ⟹ XP_038415506

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	16	14,411,948 - 14,418,752 (+)	NCBI

RefSeq Acc Id:

XM_038559579 ⟹ XP_038415507

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	16	14,412,048 - 14,418,752 (+)	NCBI

RefSeq Acc Id:

XM_038559580 ⟹ XP_038415508

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	16	14,412,963 - 14,418,752 (+)	NCBI

RefSeq Acc Id:

XM_038623576 ⟹ XP_038479504

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	16	14,430,844 - 14,438,274 (+)	NCBI

RefSeq Acc Id:

XM_038623577 ⟹ XP_038479505

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	16	14,430,968 - 14,438,274 (+)	NCBI

RefSeq Acc Id:

XM_038623578 ⟹ XP_038479506

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	16	14,431,472 - 14,438,274 (+)	NCBI

RefSeq Acc Id:

XM_038623579 ⟹ XP_038479507

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	16	14,431,572 - 14,438,274 (+)	NCBI

RefSeq Acc Id:

XM_038623580 ⟹ XP_038479508

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	16	14,432,487 - 14,438,274 (+)	NCBI

RefSeq Acc Id:

XM_038689309 ⟹ XP_038545237

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	16	14,799,626 - 14,807,063 (+)	NCBI

RefSeq Acc Id:

XM_038689310 ⟹ XP_038545238

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	16	14,799,750 - 14,807,063 (+)	NCBI

RefSeq Acc Id:

XM_038689311 ⟹ XP_038545239

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	16	14,800,253 - 14,807,063 (+)	NCBI

RefSeq Acc Id:

XM_038689312 ⟹ XP_038545240

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	16	14,800,353 - 14,807,063 (+)	NCBI

RefSeq Acc Id:

XM_038689313 ⟹ XP_038545241

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	16	14,801,268 - 14,807,063 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_022272231	(Get FASTA)	NCBI Sequence Viewer
	XP_038308503	(Get FASTA)	NCBI Sequence Viewer
	XP_038308504	(Get FASTA)	NCBI Sequence Viewer
	XP_038308505	(Get FASTA)	NCBI Sequence Viewer
	XP_038308506	(Get FASTA)	NCBI Sequence Viewer
	XP_038381175	(Get FASTA)	NCBI Sequence Viewer
	XP_038381176	(Get FASTA)	NCBI Sequence Viewer
	XP_038381177	(Get FASTA)	NCBI Sequence Viewer
	XP_038381178	(Get FASTA)	NCBI Sequence Viewer
	XP_038381179	(Get FASTA)	NCBI Sequence Viewer
	XP_038415504	(Get FASTA)	NCBI Sequence Viewer
	XP_038415505	(Get FASTA)	NCBI Sequence Viewer
	XP_038415506	(Get FASTA)	NCBI Sequence Viewer
	XP_038415507	(Get FASTA)	NCBI Sequence Viewer
	XP_038415508	(Get FASTA)	NCBI Sequence Viewer
	XP_038479504	(Get FASTA)	NCBI Sequence Viewer
	XP_038479505	(Get FASTA)	NCBI Sequence Viewer
	XP_038479506	(Get FASTA)	NCBI Sequence Viewer
	XP_038479507	(Get FASTA)	NCBI Sequence Viewer
	XP_038479508	(Get FASTA)	NCBI Sequence Viewer
	XP_038545237	(Get FASTA)	NCBI Sequence Viewer
	XP_038545238	(Get FASTA)	NCBI Sequence Viewer
	XP_038545239	(Get FASTA)	NCBI Sequence Viewer
	XP_038545240	(Get FASTA)	NCBI Sequence Viewer
	XP_038545241	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000004344.5
	ENSCAFP00000067254.1
	ENSCAFP00845008046.1
	ENSCAFP00845008076
	ENSCAFP00845008076.1
	ENSCAFP00845008084
	ENSCAFP00845008084.1
	ENSCAFP00845008109.1
	ENSCAFP00845008139.1

RefSeq Acc Id:	XP_038479504 ⟸ XM_038623576
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038479505 ⟸ XM_038623577
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038479506 ⟸ XM_038623578
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038479507 ⟸ XM_038623579
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038479508 ⟸ XM_038623580
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038545237 ⟸ XM_038689309
- Peptide Label:	isoform X1
- UniProtKB:	A0A8P0TIQ7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038545238 ⟸ XM_038689310
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0R2H2 (UniProtKB/TrEMBL), A0A8I3MQF6 (UniProtKB/TrEMBL), A0A8P0N5X4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038545239 ⟸ XM_038689311
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0R2H2 (UniProtKB/TrEMBL), A0A8I3MQF6 (UniProtKB/TrEMBL), A0A8P0N5X4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038545240 ⟸ XM_038689312
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0R2H2 (UniProtKB/TrEMBL), A0A8I3MQF6 (UniProtKB/TrEMBL), A0A8P0N5X4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038545241 ⟸ XM_038689313
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3RUD9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038308503 ⟸ XM_038452575
- Peptide Label:	isoform X1
- UniProtKB:	A0A8P0TIQ7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038308504 ⟸ XM_038452576
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0R2H2 (UniProtKB/TrEMBL), A0A8I3MQF6 (UniProtKB/TrEMBL), A0A8P0N5X4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038308505 ⟸ XM_038452577
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0R2H2 (UniProtKB/TrEMBL), A0A8I3MQF6 (UniProtKB/TrEMBL), A0A8P0N5X4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038308506 ⟸ XM_038452578
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0R2H2 (UniProtKB/TrEMBL), A0A8I3MQF6 (UniProtKB/TrEMBL), A0A8P0N5X4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_022272231 ⟸ XM_022416523
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3RUD9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFMGRTVLPLHICWSQPWPPRLQVRSRLWGAVVLRPIPHQRQTRPWFITGREDSQTSGDGIQIK KLCELQPGEKCCVVGTLFKAMPLQPSILREISEEHNLLPQPPRSKYIHPDDQLVLEDELQRIKL EGSIDASKLVTGTVLAVLGSVRDSGKFLVEDHCFAELAPQKPAPTLDTDRFVLLVSGLGLGGGG GESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHNTQSRDSINKAKYLTKKTQAAS VEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATI DGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRIRHISPTAPDTLGCYPFYKNDPFIFPDCPH VYFCGNTPQFGSKIFRGPEDQRVLLVAVPDFSTTQTACLVNLRSLACQPISFSGFGAEDEDLGG LGLSP hide sequence

RefSeq Acc Id:	XP_038415504 ⟸ XM_038559576
- Peptide Label:	isoform X1
- UniProtKB:	A0A8P0TIQ7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038415505 ⟸ XM_038559577
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0R2H2 (UniProtKB/TrEMBL), A0A8I3MQF6 (UniProtKB/TrEMBL), A0A8P0N5X4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038415506 ⟸ XM_038559578
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0R2H2 (UniProtKB/TrEMBL), A0A8I3MQF6 (UniProtKB/TrEMBL), A0A8P0N5X4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038415507 ⟸ XM_038559579
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0R2H2 (UniProtKB/TrEMBL), A0A8I3MQF6 (UniProtKB/TrEMBL), A0A8P0N5X4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038415508 ⟸ XM_038559580
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3RUD9 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845008084 ⟸ ENSCAFT00845010404

RefSeq Acc Id:

ENSCAFP00845008139 ⟸ ENSCAFT00845010471

RefSeq Acc Id:

ENSCAFP00845008046 ⟸ ENSCAFT00845010350

RefSeq Acc Id:

ENSCAFP00845008109 ⟸ ENSCAFT00845010433

RefSeq Acc Id:

ENSCAFP00845008076 ⟸ ENSCAFT00845010393

Protein Domains

DNA polymerase alpha/delta/epsilon subunit B DNA polymerase delta subunit OB-fold

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000002933	UniProtKB/TrEMBL
	ENSCAFG00845005836	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000004694.5	UniProtKB/TrEMBL
	ENSCAFT00000101422.1	UniProtKB/TrEMBL
	ENSCAFT00845010350.1	UniProtKB/TrEMBL
	ENSCAFT00845010393	ENTREZGENE
	ENSCAFT00845010393.1	UniProtKB/TrEMBL
	ENSCAFT00845010404	ENTREZGENE
	ENSCAFT00845010404.1	UniProtKB/TrEMBL
	ENSCAFT00845010433.1	UniProtKB/TrEMBL
	ENSCAFT00845010471.1	UniProtKB/TrEMBL
Gene3D-CATH	2.40.50.430	UniProtKB/TrEMBL
	3.60.21.50	UniProtKB/TrEMBL
InterPro	DNA_pol_a/d/e_bsu	UniProtKB/TrEMBL
	DNA_pol_D_N	UniProtKB/TrEMBL
	DNA_pol_delta/II_ssu	UniProtKB/TrEMBL
	PolD2_C	UniProtKB/TrEMBL
NCBI Gene	POLD2	ENTREZGENE
PANTHER	DNA POLYMERASE DELTA SUBUNIT 2	UniProtKB/TrEMBL
	PTHR10416	UniProtKB/TrEMBL
Pfam	DNA_pol_D_N	UniProtKB/TrEMBL
	DNA_pol_E_B	UniProtKB/TrEMBL
UniProt	A0A8C0R2H2	ENTREZGENE
	A0A8I3MQF6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MX29_CANLF	UniProtKB/TrEMBL
	A0A8I3N0Y1_CANLF	UniProtKB/TrEMBL
	A0A8I3N1Z1_CANLF	UniProtKB/TrEMBL
	A0A8I3RUD9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0N5X4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0TIQ7	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:44775	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

RGD Manual Annotations

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Imported Disease Annotations - ClinVar

RGD Manual Annotations