PRPSAP2 (phosphoribosyl pyrophosphate synthetase associated protein 2) - Rat Genome Database

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Gene: PRPSAP2 (phosphoribosyl pyrophosphate synthetase associated protein 2) Canis lupus familiaris
Analyze
Symbol: PRPSAP2
Name: phosphoribosyl pyrophosphate synthetase associated protein 2
RGD ID: 12326803
Description: ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN bone development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Common Variable Immunodeficiency 2 (ortholog); Joubert syndrome (ortholog); FOUND IN protein-containing complex (ortholog); ribose phosphate diphosphokinase complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: phosphoribosyl pyrophosphate synthase-associated protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1541,118,591 - 41,167,647 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl541,039,015 - 41,167,568 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha541,259,690 - 41,308,531 (-)NCBI
ROS_Cfam_1.0541,226,139 - 41,275,052 (-)NCBI
ROS_Cfam_1.0 Ensembl541,222,994 - 41,275,060 (-)Ensembl
UMICH_Zoey_3.1541,193,893 - 41,242,719 (-)NCBI
UNSW_CanFamBas_1.0541,141,286 - 41,190,416 (-)NCBI
UU_Cfam_GSD_1.0541,333,180 - 41,382,030 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
PRPSAP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1541,118,591 - 41,167,647 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl541,039,015 - 41,167,568 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha541,259,690 - 41,308,531 (-)NCBI
ROS_Cfam_1.0541,226,139 - 41,275,052 (-)NCBI
ROS_Cfam_1.0 Ensembl541,222,994 - 41,275,060 (-)Ensembl
UMICH_Zoey_3.1541,193,893 - 41,242,719 (-)NCBI
UNSW_CanFamBas_1.0541,141,286 - 41,190,416 (-)NCBI
UU_Cfam_GSD_1.0541,333,180 - 41,382,030 (-)NCBI
PRPSAP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381718,856,299 - 18,931,287 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1718,840,085 - 18,931,287 (+)EnsemblGRCh38hg38GRCh38
GRCh371718,759,612 - 18,834,600 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361718,702,217 - 18,775,305 (+)NCBINCBI36hg18NCBI36
Build 341718,702,216 - 18,775,305NCBI
Celera1720,676,623 - 20,748,896 (+)NCBI
Cytogenetic Map17p11.2NCBI
HuRef1718,325,616 - 18,400,327 (+)NCBIHuRef
CHM1_11718,768,404 - 18,843,360 (+)NCBICHM1_1
T2T-CHM13v2.01718,802,453 - 18,877,802 (+)NCBI
Prpsap2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391161,620,476 - 61,652,924 (-)NCBIGRCm39mm39
GRCm39 Ensembl1161,620,476 - 61,652,914 (-)Ensembl
GRCm381161,729,650 - 61,762,098 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1161,729,650 - 61,762,088 (-)EnsemblGRCm38mm10GRCm38
MGSCv371161,543,152 - 61,575,590 (-)NCBIGRCm37mm9NCBIm37
MGSCv361161,545,849 - 61,578,257 (-)NCBImm8
MGSCv361162,158,719 - 62,191,127 (-)NCBImm8
Cytogenetic Map11B2NCBI
Prpsap2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21046,410,817 - 46,445,929 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1046,410,835 - 46,445,849 (-)Ensembl
Rnor_6.01048,008,799 - 48,044,435 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1048,008,802 - 48,044,344 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01047,801,645 - 47,837,244 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41047,890,667 - 47,925,430 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11047,904,289 - 47,939,053 (-)NCBI
Celera1045,658,797 - 45,693,561 (-)NCBICelera
Cytogenetic Map10q22NCBI
Prpsap2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955467676,195 - 722,233 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955467676,845 - 722,175 (-)NCBIChiLan1.0ChiLan1.0
PRPSAP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11737,247,504 - 37,321,897 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1737,247,504 - 37,320,704 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01732,316,289 - 32,392,531 (-)NCBIMhudiblu_PPA_v0panPan3
Prpsap2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560259,871,181 - 59,905,264 (+)NCBI
SpeTri2.0NW_004936881682,011 - 716,082 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PRPSAP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1260,281,878 - 60,396,630 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11260,340,879 - 60,387,856 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21262,850,813 - 62,869,074 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PRPSAP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11617,573,627 - 17,634,290 (+)NCBIChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660593,238,732 - 3,312,942 (-)NCBIVero_WHO_p1.0
Prpsap2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248495,298,410 - 5,334,161 (+)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_0046248495,298,389 - 5,334,161 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005620140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005620141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022418648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038518090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038537078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038537079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038537080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038537081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038601209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038601210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038601211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038601212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665780 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_546654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00845034989   ⟹   ENSCAFP00845027399
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl541,222,994 - 41,275,053 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845035145   ⟹   ENSCAFP00845027510
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl541,226,491 - 41,275,060 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845035253   ⟹   ENSCAFP00845027597
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl541,226,491 - 41,275,053 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845035319   ⟹   ENSCAFP00845027643
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl541,226,491 - 41,269,449 (-)Ensembl
RefSeq Acc Id: XM_005620140   ⟹   XP_005620197
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1541,118,591 - 41,167,557 (-)NCBI
Dog10K_Boxer_Tasha541,260,045 - 41,308,378 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005620141   ⟹   XP_005620198
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1541,118,591 - 41,167,647 (-)NCBI
Dog10K_Boxer_Tasha541,260,045 - 41,308,531 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038475887   ⟹   XP_038331815
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1541,194,248 - 41,242,566 (-)NCBI
RefSeq Acc Id: XM_038475888   ⟹   XP_038331816
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1541,193,893 - 41,242,713 (-)NCBI
RefSeq Acc Id: XM_038475889   ⟹   XP_038331817
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1541,193,893 - 41,237,099 (-)NCBI
RefSeq Acc Id: XM_038475890   ⟹   XP_038331818
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1541,194,248 - 41,242,719 (-)NCBI
RefSeq Acc Id: XM_038518090   ⟹   XP_038374018
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha541,259,690 - 41,302,916 (-)NCBI
RefSeq Acc Id: XM_038537078   ⟹   XP_038393006
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0541,333,535 - 41,381,877 (-)NCBI
RefSeq Acc Id: XM_038537079   ⟹   XP_038393007
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0541,333,180 - 41,382,024 (-)NCBI
RefSeq Acc Id: XM_038537080   ⟹   XP_038393008
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0541,333,180 - 41,376,408 (-)NCBI
RefSeq Acc Id: XM_038537081   ⟹   XP_038393009
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0541,333,535 - 41,382,030 (-)NCBI
RefSeq Acc Id: XM_038601209   ⟹   XP_038457137
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0541,141,639 - 41,190,392 (-)NCBI
RefSeq Acc Id: XM_038601210   ⟹   XP_038457138
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0541,141,639 - 41,190,416 (-)NCBI
RefSeq Acc Id: XM_038601211   ⟹   XP_038457139
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0541,141,286 - 41,190,414 (-)NCBI
RefSeq Acc Id: XM_038601212   ⟹   XP_038457140
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0541,141,286 - 41,184,542 (-)NCBI
RefSeq Acc Id: XM_038665779   ⟹   XP_038521707
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0541,226,494 - 41,275,052 (-)NCBI
RefSeq Acc Id: XM_038665780   ⟹   XP_038521708
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0541,226,494 - 41,274,871 (-)NCBI
RefSeq Acc Id: XM_038665781   ⟹   XP_038521709
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0541,226,139 - 41,274,980 (-)NCBI
RefSeq Acc Id: XM_038665782   ⟹   XP_038521710
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0541,226,139 - 41,269,408 (-)NCBI
RefSeq Acc Id: XM_546654   ⟹   XP_546654
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1541,118,591 - 41,167,632 (-)NCBI
Dog10K_Boxer_Tasha541,259,690 - 41,308,525 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_005620198   ⟸   XM_005620141
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_546654   ⟸   XM_546654
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005620197   ⟸   XM_005620140
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_038331816   ⟸   XM_038475888
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038331817   ⟸   XM_038475889
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038331818   ⟸   XM_038475890
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038331815   ⟸   XM_038475887
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038457139   ⟸   XM_038601211
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038457140   ⟸   XM_038601212
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038457138   ⟸   XM_038601210
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038457137   ⟸   XM_038601209
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038521709   ⟸   XM_038665781
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038521710   ⟸   XM_038665782
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038521707   ⟸   XM_038665779
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038521708   ⟸   XM_038665780
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038374018   ⟸   XM_038518090
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038393007   ⟸   XM_038537079
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038393008   ⟸   XM_038537080
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038393009   ⟸   XM_038537081
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038393006   ⟸   XM_038537078
- Peptide Label: isoform X1
RefSeq Acc Id: ENSCAFP00845027399   ⟸   ENSCAFT00845034989
RefSeq Acc Id: ENSCAFP00845027510   ⟸   ENSCAFT00845035145
RefSeq Acc Id: ENSCAFP00845027597   ⟸   ENSCAFT00845035253
RefSeq Acc Id: ENSCAFP00845027643   ⟸   ENSCAFT00845035319
Protein Domains
Pribosyltran_N

Promoters
RGD ID:13683278
Promoter ID:EPDNEW_C1345
Type:initiation region
Name:PRPSAP2_1
Description:phosphoribosyl pyrophosphate synthetase associated protein 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1541,167,627 - 41,167,687EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000018248 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00845019813 Ensembl, ENTREZGENE
Ensembl Protein ENSCAFP00000026958 UniProtKB/TrEMBL
  ENSCAFP00000048303 UniProtKB/TrEMBL
  ENSCAFP00000050005 UniProtKB/TrEMBL
  ENSCAFP00000050431 UniProtKB/TrEMBL
  ENSCAFP00000058808 UniProtKB/TrEMBL
  ENSCAFP00000060390 UniProtKB/TrEMBL
  ENSCAFP00845027510 ENTREZGENE
  ENSCAFP00845027597 ENTREZGENE
  ENSCAFP00845027643 ENTREZGENE
Ensembl Transcript ENSCAFT00000028988 UniProtKB/TrEMBL
  ENSCAFT00000059989 UniProtKB/TrEMBL
  ENSCAFT00000070300 UniProtKB/TrEMBL
  ENSCAFT00000071883 UniProtKB/TrEMBL
  ENSCAFT00000074866 UniProtKB/TrEMBL
  ENSCAFT00000084645 UniProtKB/TrEMBL
  ENSCAFT00845035145 ENTREZGENE
  ENSCAFT00845035253 ENTREZGENE
  ENSCAFT00845035319 ENTREZGENE
Gene3D-CATH 1.20.1730.10 UniProtKB/TrEMBL
  3.40.50.2020 UniProtKB/TrEMBL
InterPro Na/Glc_symporter_sf UniProtKB/TrEMBL
  Na/solute_symporter UniProtKB/TrEMBL
  Na/solute_symporter_CS UniProtKB/TrEMBL
  Pribosyltran_N UniProtKB/TrEMBL
  PRibTrfase_dom UniProtKB/TrEMBL
  PRTase-like UniProtKB/TrEMBL
  Rib-P_diPkinase UniProtKB/TrEMBL
NCBI Gene PRPSAP2 ENTREZGENE
PANTHER PTHR10210 UniProtKB/TrEMBL
Pfam Pribosyl_synth UniProtKB/TrEMBL
  Pribosyltran_N UniProtKB/TrEMBL
  SSF UniProtKB/TrEMBL
PROSITE NA_SOLUT_SYMP_2 UniProtKB/TrEMBL
  NA_SOLUT_SYMP_3 UniProtKB/TrEMBL
Superfamily-SCOP SSF53271 UniProtKB/TrEMBL
TIGRFAMs ribP_PPkin UniProtKB/TrEMBL
UniProt A0A5F4C2B5_CANLF UniProtKB/TrEMBL
  A0A5F4C817_CANLF UniProtKB/TrEMBL
  A0A5F4C985_CANLF UniProtKB/TrEMBL
  A0A5F4D1R3_CANLF UniProtKB/TrEMBL
  A0A5F4D6F7_CANLF UniProtKB/TrEMBL
  E2RIW6_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:45035 ENTREZGENE