RCAN2 (regulator of calcineurin 2)

Gene: RCAN2 (regulator of calcineurin 2) Canis lupus familiaris

Analyze

Symbol:

RCAN2

Name:

regulator of calcineurin 2

RGD ID:

12324978

Description:

ENCODES a protein that exhibits calcium-dependent protein serine/threonine phosphatase regulator activity (inferred); nucleic acid binding (inferred); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); locomotion involved in locomotory behavior (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

calcipressin-2

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	RCAN2 (regulator of calcineurin 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Rcan2 (regulator of calcineurin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Rcan2 (regulator of calcineurin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Rcan2 (regulator of calcineurin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	RCAN2 (regulator of calcineurin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Rcan2 (regulator of calcineurin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	RCAN2 (regulator of calcineurin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	RCAN2 (regulator of calcineurin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Rcan2 (regulator of calcineurin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	14,427,095 - 14,647,327 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	14,428,406 - 14,687,241 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	14,458,631 - 14,718,983 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	14,927,188 - 15,187,200 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	14,927,180 - 15,187,355 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	14,442,961 - 14,703,496 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	14,531,756 - 14,791,823 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	14,628,322 - 14,888,571 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

calcineurin-NFAT signaling cascade (ISO)

calcium-mediated signaling (IEA)

locomotion involved in locomotory behavior (ISO)

Notch signaling pathway (ISO)

response to oxidative stress (ISO)

response to stress (ISO)

short-term memory (ISO)

Cellular Component

cytoplasm (IEA)

nucleus (IEA)

Molecular Function

calcium-dependent protein serine/threonine phosphatase regulator activity (IEA)

nucleic acid binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

RCAN2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	14,427,095 - 14,647,327 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	14,428,406 - 14,687,241 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	14,458,631 - 14,718,983 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	14,927,188 - 15,187,200 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	14,927,180 - 15,187,355 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	14,442,961 - 14,703,496 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	14,531,756 - 14,791,823 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	14,628,322 - 14,888,571 (-)	NCBI		UU_Cfam_GSD_1.0

RCAN2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	46,220,736 - 46,491,970 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	46,220,736 - 46,491,972 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	46,188,473 - 46,459,707 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	46,296,428 - 46,401,490 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	46,296,433 - 46,401,364	NCBI
Celera	6	47,741,020 - 47,846,061 (-)	NCBI		Celera
Cytogenetic Map	6	p12.3	NCBI
HuRef	6	45,911,564 - 46,182,793 (-)	NCBI		HuRef
CHM1_1	6	46,191,709 - 46,463,038 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	46,055,860 - 46,329,613 (-)	NCBI		T2T-CHM13v2.0

Rcan2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	44,112,243 - 44,350,407 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	44,112,242 - 44,350,407 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	43,801,352 - 44,039,516 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	43,801,351 - 44,039,516 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	43,938,800 - 44,176,465 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	43,264,906 - 43,502,571 (+)	NCBI		MGSCv36	mm8
Celera	17	47,226,766 - 47,458,244 (+)	NCBI		Celera
Cytogenetic Map	17	B3	NCBI
cM Map	17	19.77	NCBI

Rcan2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	24,456,861 - 24,674,234 (-)	NCBI		GRCr8
mRatBN7.2	9	16,959,478 - 17,174,823 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	16,959,480 - 17,174,856 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	25,543,367 - 25,758,360 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	30,617,888 - 30,832,887 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	28,907,100 - 29,122,117 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	19,518,568 - 19,749,145 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	19,518,558 - 19,749,145 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	18,397,065 - 18,626,606 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	12,623,121 - 12,853,302 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	12,620,444 - 12,850,624 (-)	NCBI
Celera	9	14,685,543 - 14,899,643 (-)	NCBI		Celera
Cytogenetic Map	9	q13	NCBI

Rcan2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	11,243,143 - 11,405,795 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955437	11,243,195 - 11,406,488 (-)	NCBI	ChiLan1.0	ChiLan1.0

RCAN2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	60,713,940 - 60,987,123 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	56,580,011 - 56,853,215 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	45,801,389 - 46,074,620 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	47,074,850 - 47,347,556 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	47,074,850 - 47,312,149 (-)	Ensembl	panpan1.1		panPan2

Rcan2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	49,849,314 - 50,090,256 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936476	13,915,701 - 14,110,891 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936476	13,869,797 - 14,110,892 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RCAN2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	40,980,527 - 41,282,835 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	40,979,814 - 41,282,869 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	47,364,244 - 47,451,587 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RCAN2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	25,775,137 - 26,034,443 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	25,939,629 - 26,034,448 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	46,223,466 - 46,511,471 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rcan2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	14,086,096 - 14,250,567 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624754	14,086,947 - 14,250,473 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in RCAN2
2912 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	4	5	11		4			6	12	2		4
Low	1		10	5	2	5	6			6	10	2
Below cutoff			1	1		1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014118488	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014118489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038491977	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038491979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038491980	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038554239	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038554240	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038554241	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038618107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038618108	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038618109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038672391	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038672401	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038683695	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038683696	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038683697	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000123	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000003202 ⟹ ENSCAFP00000002976

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	12	14,428,406 - 14,524,296 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000047949 ⟹ ENSCAFP00000039252

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	12	14,428,406 - 14,687,241 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845022817 ⟹ ENSCAFP00845017884

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	12	14,927,180 - 15,187,355 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845022842 ⟹ ENSCAFP00845017905

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	12	14,927,917 - 15,024,313 (-)	Ensembl

RefSeq Acc Id:

XM_014118489 ⟹ XP_013973964

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	12	14,427,095 - 14,524,327 (-)	NCBI
Dog10K_Boxer_Tasha	12	14,458,631 - 14,555,814 (-)	NCBI

Sequence:

show sequence

CGTTCATTACTCTACTGTGCAGCCTCAGACGCGGGCTGCGTGCGTGCAGAGGGAGTGGGGCTCC
AGGTGCCGAGCGCCGGCGATCCCCAGGGCAAGGCGACACCCGGGCCCGCCACGGCCACATCCAC
CTGGAGACTCTTCCCGTCACGCACAGCTCTGAGGTCGCCGAGCTCTTGATTGAAAATTCGGGAG
GGGGAATGCCAGCCCCTAGCATGGACTGTGATGTTTCCACTCTGGTTGCCTGTGTGGTGGATGT
CGAGGTCTTTACCAATCAGGAGGTTAAGGAAAAATTTGAGGGTCTGTTTCGGACTTACGATGAC
TGTGTGACGTTCCAGCTGTTTAAGAGTTTCAGACGTGTCCGAATAAACTTCAGCAATCCCAAGT
CTGCAGCCCGAGCCAGGATAGAGCTTCATGAAACCCAGTTCAGAGGGAAAAAATTAAAACTCTA
CTTTGCACAGGTTCAGACTCCAGAGACAGACGGTGACAAGCTACATTTGGCTCCACCACAGCCC
GCCAAACAATTCCTCATCTCACCCCCGGCATCTCCTCCCGTCGGCTGGCAGCCCATCAGTGATG
CCACCCCAGTGCTCAACTATGACCTCCTCTATGCCGTGGCCAAACTAGGACCAGGAGAGAAGTA
TGAGCTCCATGCAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCACGTGTGTGACAGTGACATA
GAGGAAGAGGAGGATCCAAAGACTTCCCCAAAGCCAAAAATCATCCAAACCCGGCGTCCTGGCC
TGCCACCCTCCGTGTCCAACTGAGCTCACCGCTCCGCCTCAACAATAATATCTGTCTCCTCTTT
ATCATGCTTTTTTTCCCTCTGTTGTTTGTTTGTCGAAAAAAAAAAATAATTGCCTTTCAATCCC
TGGGTGTTTGGTTGTTTGAGACTCCTTCCTTGTAATCAAGCCTCTCGGACAAAAGGGCTAGGAA
AAGGTGATATGTTTCCTGATCATATCATACCCATCGAGTGTAATCCATTATTTAGAAGGTTCTA
GGAAAAAAAGGTAGTATTTTCTTATTAAAGAATCAGCACAGCCTGTATCTTTATTCTCTCATGC
TGATCCAAGCCAGAGACACCAGTAACAAATAGCACCCGTGTTGTTTGTGATCTGTTTCAGTCCC
AGTCCTGACGTGTGTGCGTTGTTTCTTCCTGGCCACGTAAGTAGGACCATAAGTAAACTTGACT
TTGACTGCATGAGATATCCCTATCTGGTCTCACTCAGTCCTCTGCATCCCGACATTCCCAGGAC
ATGCATGATCACCAGCATTTATTTTCATGATTCGAGGATATACTATAATTCACAGATTGTCAGC
ATCCAGCCATGTCCTATCTAGACTAGAAAAATTATCAGCACCATCCAGCTCAACACGTCTGGGT
ATATCCACCATTTTGAGTCAGTACTTCATAGCTCTGTTAAAATTCCTGGAGGTGACACTGAGCT
TGGCCCCAAAGATATTCCTCAGTAGATTTTGAACACCACTTCCGTATAGTACTTTCCCAGCCTC
ACTGGGGAGGCTTGTCCAGGGTGATATAGACCGATTTCAGACAAACCTATTTATTACAAAAGTT
TCATGGTGTCTGAATGATTGTTTTTTTCTCTTTGTATATTTGTACAAATGTTTCAGCTGTGCTT
TTAAAATCTGGATGTTTTTTATTTAGTGATTGTTCAGCCATTAGCTGCTTAAAAACATAATATG
TGCATTGCTTATGAATGCATTCATATACTAATGCAGATAATCTGATAATATTACACTCTATTAT
GGATAATGCTGAATTTTGAAAGGGCACAAACTTCTCATGCCAATATATAAATGATTAGCCAACA
TCTTTGCTATCAAGAATACTTGTTTTTAAATAAAGTGAAGATGCAAATGTCCATCATAGACAAC
TTGGATGAAGCTAAATCTCCAGAACATAGCGGCCACTGAGGATTTGAAAAAGGAAAGGATGGTA
GATAAACAAACATATACCAATCCTACTCATGCAATGGCCATGTTGCTCAAAAATATTTGTTTTC
GTCACATGTGATATTTCTATTTCTGTAGCCCGAAGTGCATTACAGAAAATACACCTATAAGACC
ATTACCTTCTGCTATATGTGCAAGGCCTCATCTACTCCTGTACATTAATGAATTACTTTAAATG
CAAATGCCAGTTACAAGGGAGTGGGGAAATACTTTCATTACCCAAGCCTCAGAAAAACACACGA
GAACAATAACACAGCCAACTTATGGAAGGATTGTTGTGGTTTTTGACTAAGGTGTATGCTAGTT
TCATGAGAAACTTAAAACAGACTGATCACTCAGAAATTAAAGTCCGTTCTACTGTGAATATAGC
AATATAGTACTGGACACAGTACAGGTGAAACTGAGGACAGCATTGCTTGTAAAACCCTGAGTTT
CCATAAGAAAAATGAAGGCTCCTTTTAAAAATAAAATCTGAGGAGTGTATAATAAGCAAATGCT
TTGACTTTCCTTTGCTGTGGAAGTTTTTGGTTTTTCAGTCACAAATGAAAGCTAGTCTAGTGGA
GAAATGCTTCCCTCTAGTGGAAGAAATATTTTCTGGGCTCTTGAGACTAAGAAAGAACAGCAGC
CATCAGCCATTTTGTGCTGAGTCTCTTCTCAGCCTTCTGAGGGTCATTTGACTTTTCAAGCTAC
TCAGAATTTTCAGAATGCAGATTCTAAAGACAGCTGGATGAGAAACAAATATTTGGAAATAATT
TTTTAAGTGTTTTGAAGCTGATACCATCAGTCATTTCCAGCCAAGTTAAGCAAAAGTTAAAATG
ACCATGCTGTCATCACAAAATAAAACCACAGTGGAGTGTATGACCTAAGTGGTTAGTCTTGGTG
AAATTTATTGTGAAGTTGCCATGTGACTCTGTCTCAGATCAAGTAATTCTTTCATTAGGTTGGG
TCTGGGGAGGGGGGAAAGAGGAACTTTTCCGAGGAGAGCGGACAGACATGGGAAAGACTCCTCG
AAGGGTGTCAGCGGAGCCTCCTGCACTGCGAAAAGAAGTCAGAATTGCCTCAGCATTTCCATGA
CGCACATTATGCAAACCTCTTTAGCACGATTTTCAGTTTGAAAGTTGAAATATGGAGGGGAAAG
GGGAGGTTTCCACCAATTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGGCTTCAAAT
ATACCTGGTGAATGACTCTT

hide sequence

RefSeq Acc Id:

XM_038491977 ⟹ XP_038347905

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	12	14,442,961 - 14,703,496 (-)	NCBI

RefSeq Acc Id:

XM_038491979 ⟹ XP_038347907

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	12	14,442,961 - 14,667,209 (-)	NCBI

RefSeq Acc Id:

XM_038491980 ⟹ XP_038347908

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	12	14,442,961 - 14,540,415 (-)	NCBI

RefSeq Acc Id:

XM_038554239 ⟹ XP_038410167

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	12	14,628,322 - 14,888,571 (-)	NCBI

RefSeq Acc Id:

XM_038554240 ⟹ XP_038410168

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	12	14,628,322 - 14,852,327 (-)	NCBI

RefSeq Acc Id:

XM_038554241 ⟹ XP_038410169

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	12	14,628,322 - 14,725,527 (-)	NCBI

RefSeq Acc Id:

XM_038618107 ⟹ XP_038474035

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	12	14,531,756 - 14,791,823 (-)	NCBI

RefSeq Acc Id:

XM_038618108 ⟹ XP_038474036

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	12	14,531,756 - 14,755,470 (-)	NCBI

RefSeq Acc Id:

XM_038618109 ⟹ XP_038474037

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	12	14,531,756 - 14,628,943 (-)	NCBI

RefSeq Acc Id:

XM_038672391 ⟹ XP_038528319

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	12	14,458,631 - 14,718,983 (-)	NCBI

RefSeq Acc Id:

XM_038672401 ⟹ XP_038528329

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	12	14,458,631 - 14,682,800 (-)	NCBI

RefSeq Acc Id:

XM_038683695 ⟹ XP_038539623

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	12	14,927,188 - 15,187,200 (-)	NCBI

RefSeq Acc Id:

XM_038683696 ⟹ XP_038539624

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	12	14,927,188 - 15,151,018 (-)	NCBI

RefSeq Acc Id:

XM_038683697 ⟹ XP_038539625

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	12	14,927,188 - 15,024,360 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_013973964	(Get FASTA)	NCBI Sequence Viewer
	XP_038347905	(Get FASTA)	NCBI Sequence Viewer
	XP_038347907	(Get FASTA)	NCBI Sequence Viewer
	XP_038347908	(Get FASTA)	NCBI Sequence Viewer
	XP_038410167	(Get FASTA)	NCBI Sequence Viewer
	XP_038410168	(Get FASTA)	NCBI Sequence Viewer
	XP_038410169	(Get FASTA)	NCBI Sequence Viewer
	XP_038474035	(Get FASTA)	NCBI Sequence Viewer
	XP_038474036	(Get FASTA)	NCBI Sequence Viewer
	XP_038474037	(Get FASTA)	NCBI Sequence Viewer
	XP_038528319	(Get FASTA)	NCBI Sequence Viewer
	XP_038528329	(Get FASTA)	NCBI Sequence Viewer
	XP_038539623	(Get FASTA)	NCBI Sequence Viewer
	XP_038539624	(Get FASTA)	NCBI Sequence Viewer
	XP_038539625	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000002976.2
	ENSCAFP00000039252.3
	ENSCAFP00030010925.1
	ENSCAFP00030010961.1
	ENSCAFP00040020427.1
	ENSCAFP00040020468.1
	ENSCAFP00845017884.1
	ENSCAFP00845017905
	ENSCAFP00845017905.1

RefSeq Acc Id:	XP_013973964 ⟸ XM_014118489
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0MK86 (UniProtKB/TrEMBL), A0A8C0KFL3 (UniProtKB/TrEMBL), A0A8I3NHX7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPAPSMDCDVSTLVACVVDVEVFTNQEVKEKFEGLFRTYDDCVTFQLFKSFRRVRINFSNPKSA ARARIELHETQFRGKKLKLYFAQVQTPETDGDKLHLAPPQPAKQFLISPPASPPVGWQPISDAT PVLNYDLLYAVAKLGPGEKYELHAGTESTPSVVVHVCDSDIEEEEDPKTSPKPKIIQTRRPGLP PSVSN hide sequence

RefSeq Acc Id:

ENSCAFP00000002976 ⟸ ENSCAFT00000003202

RefSeq Acc Id:

ENSCAFP00000039252 ⟸ ENSCAFT00000047949

RefSeq Acc Id:	XP_038347905 ⟸ XM_038491977
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038347907 ⟸ XM_038491979
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038347908 ⟸ XM_038491980
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038474035 ⟸ XM_038618107
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038474036 ⟸ XM_038618108
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038474037 ⟸ XM_038618109
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038539623 ⟸ XM_038683695
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KF11 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038539624 ⟸ XM_038683696
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KF11 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038539625 ⟸ XM_038683697
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0MK86 (UniProtKB/TrEMBL), A0A8C0KFL3 (UniProtKB/TrEMBL), A0A8I3NHX7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038528319 ⟸ XM_038672391
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KF11 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038528329 ⟸ XM_038672401
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KF11 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038410167 ⟸ XM_038554239
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KF11 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038410168 ⟸ XM_038554240
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KF11 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038410169 ⟸ XM_038554241
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0KFL3 (UniProtKB/TrEMBL), A0A8C0MK86 (UniProtKB/TrEMBL), A0A8I3NHX7 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845017884 ⟸ ENSCAFT00845022817

RefSeq Acc Id:

ENSCAFP00845017905 ⟸ ENSCAFT00845022842

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000002023	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030006782	UniProtKB/TrEMBL
	ENSCAFG00040012761	UniProtKB/TrEMBL
	ENSCAFG00845012828	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000003202.4	UniProtKB/TrEMBL
	ENSCAFT00000047949.4	UniProtKB/TrEMBL
	ENSCAFT00030012484.1	UniProtKB/TrEMBL
	ENSCAFT00030012524.1	UniProtKB/TrEMBL
	ENSCAFT00040023536.1	UniProtKB/TrEMBL
	ENSCAFT00040023580.1	UniProtKB/TrEMBL
	ENSCAFT00845022817.1	UniProtKB/TrEMBL
	ENSCAFT00845022842	ENTREZGENE
	ENSCAFT00845022842.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.70.330	UniProtKB/TrEMBL
InterPro	Calcipressin	UniProtKB/TrEMBL
	Nucleotide-bd_a/b_plait_sf	UniProtKB/TrEMBL
	RBD_domain_sf	UniProtKB/TrEMBL
	RCAN2_RRM	UniProtKB/TrEMBL
KEGG Report	cfa:609864	UniProtKB/TrEMBL
NCBI Gene	RCAN2	ENTREZGENE
PANTHER	PTHR10300	UniProtKB/TrEMBL
	PTHR10300:SF5	UniProtKB/TrEMBL
Pfam	Calcipressin	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54928	UniProtKB/TrEMBL
UniProt	A0A8C0KF11	ENTREZGENE
	A0A8C0KFL3	ENTREZGENE
	A0A8C0MK63_CANLF	UniProtKB/TrEMBL
	A0A8C0MK86	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0SF70_CANLF	UniProtKB/TrEMBL
	A0A8I3NHX7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NQG5_CANLF	UniProtKB/TrEMBL
	A0A8P0STJ3_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:45437	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar