UGP2 (UDP-glucose pyrophosphorylase 2) - Rat Genome Database
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Gene: UGP2 (UDP-glucose pyrophosphorylase 2) Canis lupus familiaris
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Symbol: UGP2
Name: UDP-glucose pyrophosphorylase 2
RGD ID: 12324659
Description: ENCODES a protein that exhibits glucose binding (ortholog); identical protein binding (ortholog); pyrimidine ribonucleotide binding (ortholog); INVOLVED IN brain development (ortholog); glucose 1-phosphate metabolic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; galactokinase deficiency pathway; galactose metabolic pathway; ASSOCIATED WITH Early Infantile Epileptic Encephalopathy, 83 (ortholog); INTERACTS WITH clofibrate
Type: protein-coding
RefSeq Status: MODEL
Also known as: UTP--glucose-1-phosphate uridylyltransferase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1063,533,171 - 63,597,452 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11063,532,366 - 63,598,362 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
clofibrate  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA)

Molecular Function

References

Genomics

Comparative Map Data
UGP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1063,533,171 - 63,597,452 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11063,532,366 - 63,598,362 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
UGP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl263,840,940 - 63,891,562 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl263,840,952 - 63,891,562 (+)EnsemblGRCh38hg38GRCh38
GRCh38263,840,969 - 63,891,562 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37264,068,084 - 64,118,696 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36263,921,602 - 63,972,200 (+)NCBINCBI36hg18NCBI36
Build 34263,980,664 - 64,030,346NCBI
Celera263,913,075 - 63,963,963 (+)NCBI
Cytogenetic Map2p15NCBI
HuRef263,807,585 - 63,858,409 (+)NCBIHuRef
CHM1_1263,998,438 - 64,048,971 (+)NCBICHM1_1
Ugp2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391121,271,126 - 21,321,267 (-)NCBIGRCm39mm39
GRCm381121,321,126 - 21,371,267 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1121,321,138 - 21,371,201 (-)EnsemblGRCm38mm10GRCm38
MGSCv371121,221,141 - 21,270,882 (-)NCBIGRCm37mm9NCBIm37
MGSCv361121,221,147 - 21,270,478 (-)NCBImm8
Celera1123,469,505 - 23,519,228 (-)NCBICelera
Cytogenetic Map11A3.1NCBI
cM Map1113.89NCBI
Ugp2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.014106,208,174 - 106,249,322 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl14106,208,176 - 106,248,539 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.014106,274,948 - 106,316,095 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.414102,072,724 - 102,113,561 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.114102,091,934 - 102,132,772 (-)NCBI
Celera1494,469,316 - 94,509,727 (-)NCBICelera
Cytogenetic Map14q22NCBI
Ugp2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542420,444,405 - 20,490,379 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542420,444,974 - 20,490,016 (-)NCBIChiLan1.0ChiLan1.0
UGP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A65,032,218 - 65,084,510 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A65,043,871 - 65,084,175 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A63,906,778 - 63,959,346 (+)NCBIMhudiblu_PPA_v0panPan3
Ugp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049364918,773,910 - 8,834,984 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UGP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl377,975,440 - 78,031,731 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1377,975,450 - 78,032,471 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2381,978,534 - 82,014,755 (-)NCBISscrofa10.2Sscrofa10.2susScr3
UGP2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11443,127,718 - 43,181,348 (-)NCBI
ChlSab1.1 Ensembl1443,128,055 - 43,180,569 (-)Ensembl
Ugp2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247629,564,500 - 9,619,899 (-)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 22 6 6 6 6 6 12 10 6
Low 8
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005626151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005626154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038489442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038489443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038489444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038551426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038551427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038551428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038615362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038615363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038615364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038680748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038680749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038680750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_860850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000005044   ⟹   ENSCAFP00000004677
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1063,533,171 - 63,597,452 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000036034   ⟹   ENSCAFP00000031364
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1063,533,171 - 63,597,452 (+)Ensembl
RefSeq Acc Id: XM_005626151   ⟹   XP_005626208
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11063,533,133 - 63,598,362 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005626153   ⟹   XP_005626210
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11063,533,626 - 63,597,452 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005626154   ⟹   XP_005626211
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11063,533,742 - 63,597,452 (+)NCBI
Sequence:
RefSeq Acc Id: XM_860850   ⟹   XP_865943
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11063,532,366 - 63,597,452 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_865943   ⟸   XM_860850
- Peptide Label: isoform X2
- UniProtKB: F1Q1Q8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005626208   ⟸   XM_005626151
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005626210   ⟸   XM_005626153
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005626211   ⟸   XM_005626154
- Peptide Label: isoform X2
- UniProtKB: F1Q1Q8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000004677   ⟸   ENSCAFT00000005044
RefSeq Acc Id: ENSCAFP00000031364   ⟸   ENSCAFT00000036034


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000003137 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCAFP00000004677 ENTREZGENE, UniProtKB/TrEMBL
  ENSCAFP00000031364 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000005044 UniProtKB/TrEMBL
  ENSCAFT00000036034 UniProtKB/TrEMBL
Gene3D-CATH 3.90.550.10 UniProtKB/TrEMBL
InterPro Nucleotide-diphossugar_trans UniProtKB/TrEMBL
  UDPGP_fam UniProtKB/TrEMBL
  UDPGP_trans UniProtKB/TrEMBL
KEGG Report cfa:474615 UniProtKB/TrEMBL
NCBI Gene UGP2 ENTREZGENE
Pfam UDPGP UniProtKB/TrEMBL
PIRSF UDPGP UniProtKB/TrEMBL
Superfamily-SCOP SSF53448 UniProtKB/TrEMBL
UniProt E2R5R9_CANLF UniProtKB/TrEMBL
  F1Q1Q8 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:48120 ENTREZGENE