NOP58 (NOP58 ribonucleoprotein) - Rat Genome Database

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Gene: NOP58 (NOP58 ribonucleoprotein) Canis lupus familiaris
Analyze
Symbol: NOP58
Name: NOP58 ribonucleoprotein
RGD ID: 12321035
Description: ENCODES a protein that exhibits ATPase binding (inferred); snoRNA binding (inferred); TFIID-class transcription factor complex binding (inferred); INVOLVED IN ribosomal small subunit biogenesis (inferred); ribosome biogenesis (inferred); snoRNA localization (inferred); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Animal Disease Models (ortholog); autoimmune lymphoproliferative syndrome type 2B (ortholog); Autoimmune Lymphoproliferative Syndrome, Type V (ortholog); FOUND IN box C/D methylation guide snoRNP complex (inferred); Cajal body (inferred); cytosol (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: NOP58 ribonucleoprotein homolog; nucleolar protein 58
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13711,255,562 - 11,287,325 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3711,255,589 - 11,287,279 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3712,138,970 - 12,170,731 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03711,191,615 - 11,223,536 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3711,191,646 - 11,223,757 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13711,142,546 - 11,173,876 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03711,121,045 - 11,152,921 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03711,114,468 - 11,146,228 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
NOP58
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13711,255,562 - 11,287,325 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3711,255,589 - 11,287,279 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3712,138,970 - 12,170,731 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03711,191,615 - 11,223,536 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3711,191,646 - 11,223,757 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13711,142,546 - 11,173,876 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03711,121,045 - 11,152,921 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03711,114,468 - 11,146,228 (+)NCBIUU_Cfam_GSD_1.0
NOP58
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382202,265,763 - 202,303,661 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2202,265,736 - 202,303,661 (+)EnsemblGRCh38hg38GRCh38
GRCh372203,130,486 - 203,168,384 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362202,838,760 - 202,876,629 (+)NCBINCBI36Build 36hg18NCBI36
Build 342202,956,020 - 202,993,888NCBI
Celera2196,882,417 - 196,920,291 (+)NCBICelera
Cytogenetic Map2q33.1NCBI
HuRef2194,979,023 - 195,015,805 (+)NCBIHuRef
CHM1_12203,136,987 - 203,174,808 (+)NCBICHM1_1
T2T-CHM13v2.02202,746,796 - 202,784,682 (+)NCBIT2T-CHM13v2.0
Nop58
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39159,724,165 - 59,751,352 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl159,724,130 - 59,758,203 (+)EnsemblGRCm39 Ensembl
GRCm38159,684,961 - 59,711,510 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl159,684,971 - 59,719,044 (+)EnsemblGRCm38mm10GRCm38
MGSCv37159,741,850 - 59,768,354 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36159,629,645 - 59,656,054 (+)NCBIMGSCv36mm8
Celera160,199,706 - 60,226,206 (+)NCBICelera
Cytogenetic Map1C2NCBI
cM Map130.38NCBI
Nop58
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8968,614,992 - 68,638,911 (+)NCBIGRCr8
mRatBN7.2961,120,939 - 61,144,810 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl961,120,929 - 61,144,810 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx969,615,623 - 69,639,722 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0974,731,599 - 74,755,698 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0973,049,892 - 73,073,989 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0966,495,881 - 66,520,521 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl966,495,832 - 66,519,788 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0966,300,036 - 66,323,766 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4958,255,685 - 58,279,522 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1958,402,666 - 58,426,502 (+)NCBI
Celera958,555,582 - 58,579,638 (+)NCBICelera
Cytogenetic Map9q31NCBI
Nop58
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545712,479,965 - 12,511,678 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545712,481,467 - 12,511,678 (-)NCBIChiLan1.0ChiLan1.0
NOP58
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213104,890,221 - 104,928,093 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B104,905,239 - 104,943,091 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B89,520,961 - 89,558,794 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B207,674,433 - 207,707,763 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B207,674,654 - 207,707,763 (+)Ensemblpanpan1.1panPan2
Nop58
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303159,486,721 - 159,517,681 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367261,457,002 - 1,486,530 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367261,457,038 - 1,487,374 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NOP58
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15105,893,637 - 105,930,459 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115105,893,589 - 105,930,458 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215117,351,116 - 117,380,896 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NOP58
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11087,989,687 - 88,026,774 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1087,989,699 - 88,026,904 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040111,362,208 - 111,399,710 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nop58
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476514,139,815 - 14,172,413 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NOP58
330 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005640546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005640548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022415084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022415085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038447634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038463804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038463805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649798 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005351272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005351273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005351274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005351275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005351276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000019778   ⟹   ENSCAFP00000018346
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3711,255,589 - 11,287,279 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000064164   ⟹   ENSCAFP00000062785
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3711,270,174 - 11,287,279 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000066553   ⟹   ENSCAFP00000064874
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3711,255,589 - 11,286,673 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845027343   ⟹   ENSCAFP00845021521
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3711,191,646 - 11,223,757 (+)Ensembl
RefSeq Acc Id: XM_005640546   ⟹   XP_005640603
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13711,255,562 - 11,287,325 (+)NCBI
Dog10K_Boxer_Tasha3712,138,970 - 12,170,731 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005640548   ⟹   XP_005640605
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13711,264,147 - 11,287,325 (+)NCBI
Dog10K_Boxer_Tasha3712,147,546 - 12,170,731 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022415084   ⟹   XP_022270792
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13711,255,562 - 11,287,325 (+)NCBI
Dog10K_Boxer_Tasha3712,138,970 - 12,170,731 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022415085   ⟹   XP_022270793
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13711,264,147 - 11,287,325 (+)NCBI
Dog10K_Boxer_Tasha3712,147,546 - 12,170,731 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038447634   ⟹   XP_038303562
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03711,191,615 - 11,223,536 (+)NCBI
RefSeq Acc Id: XM_038463804   ⟹   XP_038319732
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3712,139,194 - 12,170,049 (+)NCBI
RefSeq Acc Id: XM_038463805   ⟹   XP_038319733
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3712,149,339 - 12,170,731 (+)NCBI
RefSeq Acc Id: XM_038521688   ⟹   XP_038377616
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13711,142,546 - 11,173,876 (+)NCBI
RefSeq Acc Id: XM_038585391   ⟹   XP_038441319
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03711,114,468 - 11,146,228 (+)NCBI
RefSeq Acc Id: XM_038585392   ⟹   XP_038441320
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03711,114,692 - 11,145,546 (+)NCBI
RefSeq Acc Id: XM_038585393   ⟹   XP_038441321
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03711,114,468 - 11,146,228 (+)NCBI
RefSeq Acc Id: XM_038585394   ⟹   XP_038441322
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03711,123,044 - 11,146,228 (+)NCBI
RefSeq Acc Id: XM_038585395   ⟹   XP_038441323
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03711,124,837 - 11,146,228 (+)NCBI
RefSeq Acc Id: XM_038585396   ⟹   XP_038441324
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03711,123,044 - 11,146,228 (+)NCBI
RefSeq Acc Id: XM_038649796   ⟹   XP_038505724
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03711,121,047 - 11,152,921 (+)NCBI
RefSeq Acc Id: XM_038649797   ⟹   XP_038505725
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03711,121,045 - 11,152,239 (+)NCBI
RefSeq Acc Id: XM_038649798   ⟹   XP_038505726
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03711,121,047 - 11,152,921 (+)NCBI
RefSeq Acc Id: XM_038649799   ⟹   XP_038505727
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03711,129,792 - 11,152,921 (+)NCBI
RefSeq Acc Id: XM_038649800   ⟹   XP_038505728
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03711,129,792 - 11,152,921 (+)NCBI
RefSeq Acc Id: XR_005351272
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13711,142,548 - 11,173,876 (+)NCBI
RefSeq Acc Id: XR_005351273
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13711,142,549 - 11,173,876 (+)NCBI
RefSeq Acc Id: XR_005351274
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13711,142,548 - 11,173,876 (+)NCBI
RefSeq Acc Id: XR_005351275
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13711,150,922 - 11,173,876 (+)NCBI
RefSeq Acc Id: XR_005351276
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13711,152,702 - 11,173,876 (+)NCBI
RefSeq Acc Id: XP_005640603   ⟸   XM_005640546
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JLT8 (UniProtKB/TrEMBL),   A0A8C0RNY9 (UniProtKB/TrEMBL),   A0A8P0SH28 (UniProtKB/TrEMBL),   A0A8C0TUN6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005640605   ⟸   XM_005640548
- Peptide Label: isoform X14
- UniProtKB: A0A8C0TUN6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022270792   ⟸   XM_022415084
- Peptide Label: isoform X12
- UniProtKB: A0A8C0P0G0 (UniProtKB/TrEMBL),   A0A8C0TUN6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022270793   ⟸   XM_022415085
- Peptide Label: isoform X13
- UniProtKB: A0A8C0P0N8 (UniProtKB/TrEMBL),   A0A8P0PBM4 (UniProtKB/TrEMBL),   A0A8C0TUN6 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000062785   ⟸   ENSCAFT00000064164
Ensembl Acc Id: ENSCAFP00000018346   ⟸   ENSCAFT00000019778
Ensembl Acc Id: ENSCAFP00000064874   ⟸   ENSCAFT00000066553
RefSeq Acc Id: XP_038377616   ⟸   XM_038521688
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038505725   ⟸   XM_038649797
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038505724   ⟸   XM_038649796
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038505726   ⟸   XM_038649798
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038505727   ⟸   XM_038649799
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038505728   ⟸   XM_038649800
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038303562   ⟸   XM_038447634
- Peptide Label: isoform X1
- UniProtKB: A0A8C0TUN6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038319732   ⟸   XM_038463804
- Peptide Label: isoform X11
- UniProtKB: A0A8C0NUV0 (UniProtKB/TrEMBL),   A0A8P0PDI3 (UniProtKB/TrEMBL),   A0A8C0TUN6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038319733   ⟸   XM_038463805
- Peptide Label: isoform X13
- UniProtKB: A0A8C0P0N8 (UniProtKB/TrEMBL),   A0A8P0PBM4 (UniProtKB/TrEMBL),   A0A8C0TUN6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038441319   ⟸   XM_038585391
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JLT8 (UniProtKB/TrEMBL),   A0A8C0RNY9 (UniProtKB/TrEMBL),   A0A8C0TUN6 (UniProtKB/TrEMBL),   A0A8P0SH28 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038441321   ⟸   XM_038585393
- Peptide Label: isoform X8
- UniProtKB: A0A8C0P0G0 (UniProtKB/TrEMBL),   A0A8C0TUN6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038441320   ⟸   XM_038585392
- Peptide Label: isoform X7
- UniProtKB: A0A8C0NUV0 (UniProtKB/TrEMBL),   A0A8C0TUN6 (UniProtKB/TrEMBL),   A0A8P0PDI3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038441322   ⟸   XM_038585394
- Peptide Label: isoform X9
- UniProtKB: A0A8C0P0N8 (UniProtKB/TrEMBL),   A0A8C0TUN6 (UniProtKB/TrEMBL),   A0A8P0PBM4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038441324   ⟸   XM_038585396
- Peptide Label: isoform X10
- UniProtKB: A0A8C0TUN6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038441323   ⟸   XM_038585395
- Peptide Label: isoform X9
- UniProtKB: A0A8C0P0N8 (UniProtKB/TrEMBL),   A0A8C0TUN6 (UniProtKB/TrEMBL),   A0A8P0PBM4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845021521   ⟸   ENSCAFT00845027343
Protein Domains
Nop

Promoters
RGD ID:13689122
Promoter ID:EPDNEW_C7189
Type:initiation region
Name:NOP58_1
Description:NOP58 ribonucleoprotein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13711,255,588 - 11,255,648EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000012448 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030019493 UniProtKB/TrEMBL
  ENSCAFG00040024581 UniProtKB/TrEMBL
  ENSCAFG00845015320 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000019778.5 UniProtKB/TrEMBL
  ENSCAFT00000064164.2 UniProtKB/TrEMBL
  ENSCAFT00000066553.2 UniProtKB/TrEMBL
  ENSCAFT00030035808.1 UniProtKB/TrEMBL
  ENSCAFT00030035891.1 UniProtKB/TrEMBL
  ENSCAFT00030035991.1 UniProtKB/TrEMBL
  ENSCAFT00030036098.1 UniProtKB/TrEMBL
  ENSCAFT00040045792.1 UniProtKB/TrEMBL
  ENSCAFT00845027343 ENTREZGENE
  ENSCAFT00845027343.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.246.90 UniProtKB/TrEMBL
  1.10.287.4070 UniProtKB/TrEMBL
InterPro Nop56/Nop58 UniProtKB/TrEMBL
  NOP5_N UniProtKB/TrEMBL
  Nop_C UniProtKB/TrEMBL
  Nop_dom UniProtKB/TrEMBL
  Nop_dom_sf UniProtKB/TrEMBL
  NOSIC UniProtKB/TrEMBL
KEGG Report cfa:100856234 UniProtKB/TrEMBL
NCBI Gene NOP58 ENTREZGENE
PANTHER NUCLEOLAR PROTEIN 58 UniProtKB/TrEMBL
  PTHR10894 UniProtKB/TrEMBL
Pfam Nop UniProtKB/TrEMBL
  NOP5NT UniProtKB/TrEMBL
PROSITE NOP UniProtKB/TrEMBL
SMART NOSIC UniProtKB/TrEMBL
Superfamily-SCOP SSF89124 UniProtKB/TrEMBL
UniProt A0A8C0JLT8 ENTREZGENE
  A0A8C0NUV0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0P0G0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0P0N8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RNY9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TUN6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NWE1_CANLF UniProtKB/TrEMBL
  A0A8P0PBM4 ENTREZGENE
  A0A8P0PDI3 ENTREZGENE
  A0A8P0SH28 ENTREZGENE
UniProt Secondary A0A8P0PBM4 UniProtKB/TrEMBL
  A0A8P0PDI3 UniProtKB/TrEMBL
  A0A8P0SH28 UniProtKB/TrEMBL
VGNC ID VGNC:43892 ENTREZGENE