RUNX2 (RUNX family transcription factor 2) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: RUNX2 (RUNX family transcription factor 2) Canis lupus familiaris
Analyze
Symbol: RUNX2
Name: RUNX family transcription factor 2
RGD ID: 12320140
Description: ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); general transcription initiation factor binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN bone mineralization (ortholog); cell maturation (ortholog); cell population proliferation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Bone Fractures (ortholog); Breast Neoplasms (ortholog); cleidocranial dysplasia (ortholog); FOUND IN chromatin (inferred); cytoplasm (inferred); membrane (inferred); INTERACTS WITH nicotinamide; resveratrol
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC102156311; LOC449531; runt related transcription factor 2; runt-related transcription factor 2; runt-related transcription factor 2-like; uncharacterized LOC102156311; uncharacterized LOC449531
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11213,723,535 - 13,842,565 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1213,628,539 - 13,840,785 (+)NCBICanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1213,628,539 - 13,840,785 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1213,657,403 - 13,875,716 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01214,116,775 - 14,343,464 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1214,117,254 - 14,450,732 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11213,641,535 - 13,967,483 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01213,729,537 - 14,055,648 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01213,825,170 - 14,151,515 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
BMP signaling pathway  (IEA)
bone mineralization  (IEA,ISO)
cell maturation  (IEA,ISO)
cell population proliferation  (IEA,ISO)
cellular response to fibroblast growth factor stimulus  (ISO)
cellular response to zinc ion starvation  (ISO)
chondrocyte development  (IEA,ISO)
chondrocyte differentiation  (IEA,ISO)
embryonic cranial skeleton morphogenesis  (IEA,ISO)
embryonic forelimb morphogenesis  (IEA,ISO)
endochondral ossification  (IEA,ISO)
epithelial cell proliferation  (IEA,ISO)
gene expression  (IEA,ISO)
hemopoiesis  (IEA)
ligamentous ossification  (IEA)
negative regulation of DNA-templated transcription  (IEA)
negative regulation of smoothened signaling pathway  (IEA,ISO)
neuron differentiation  (IEA)
odontogenesis of dentin-containing tooth  (IEA,ISO)
ossification  (IEA)
osteoblast development  (IEA,ISO)
osteoblast differentiation  (IEA,ISO)
osteoblast fate commitment  (IEA,ISO)
positive regulation of cell population proliferation  (IEA,ISO)
positive regulation of chondrocyte differentiation  (IEA,ISO)
positive regulation of developmental process  (IEA)
positive regulation of DNA-templated transcription  (IEA,ISO)
positive regulation of epithelial cell proliferation  (IEA,ISO)
positive regulation of gene expression  (IEA,ISO)
positive regulation of ossification  (ISO)
positive regulation of osteoblast differentiation  (IEA,ISO)
positive regulation of stem cell proliferation  (IEA,ISO)
positive regulation of transcription by RNA polymerase II  (IEA,ISO)
regulation of cell differentiation  (IEA)
regulation of DNA-templated transcription  (IEA)
regulation of fibroblast growth factor receptor signaling pathway  (IEA,ISO)
regulation of gene expression  (IEA,ISO)
regulation of odontogenesis of dentin-containing tooth  (IEA,ISO)
regulation of ossification  (IEA,ISO)
regulation of osteoblast differentiation  (IEA,ISO)
response to insulin  (ISO)
response to organic cyclic compound  (ISO)
response to sodium phosphate  (IEA)
skeletal system development  (IEA,ISO)
skeletal system morphogenesis  (IEA,ISO)
SMAD protein signal transduction  (IEA)
smoothened signaling pathway  (IEA,ISO)
stem cell differentiation  (IEA,ISO)
stem cell proliferation  (IEA,ISO)
T cell differentiation  (IEA,ISO)

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:15596718   PMID:22301074   PMID:23013180   PMID:24916026   PMID:27916785   PMID:30032202  


Genomics

Comparative Map Data
RUNX2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11213,723,535 - 13,842,565 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1213,628,539 - 13,840,785 (+)NCBICanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1213,628,539 - 13,840,785 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1213,657,403 - 13,875,716 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01214,116,775 - 14,343,464 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1214,117,254 - 14,450,732 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11213,641,535 - 13,967,483 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01213,729,537 - 14,055,648 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01213,825,170 - 14,151,515 (+)NCBIUU_Cfam_GSD_1.0
RUNX2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38645,328,330 - 45,551,082 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl645,328,157 - 45,664,349 (+)EnsemblGRCh38hg38GRCh38
GRCh37645,296,067 - 45,518,819 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36645,404,032 - 45,626,797 (+)NCBINCBI36Build 36hg18NCBI36
Build 34645,498,291 - 45,623,020NCBI
Celera646,849,063 - 47,071,816 (+)NCBICelera
Cytogenetic Map6p21.1NCBI
HuRef645,018,738 - 45,241,794 (+)NCBIHuRef
CHM1_1645,298,649 - 45,521,390 (+)NCBICHM1_1
T2T-CHM13v2.0645,163,134 - 45,385,899 (+)NCBIT2T-CHM13v2.0
Runx2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391744,806,873 - 45,125,518 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1744,806,874 - 45,125,684 (-)EnsemblGRCm39 Ensembl
GRCm381744,495,987 - 44,814,797 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1744,495,987 - 44,814,797 (-)EnsemblGRCm38mm10GRCm38
MGSCv371744,740,950 - 44,951,746 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361744,067,056 - 44,277,682 (-)NCBIMGSCv36mm8
Celera1748,040,272 - 48,252,046 (-)NCBICelera
Cytogenetic Map17B3NCBI
cM Map1721.33NCBI
Runx2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8923,661,278 - 23,990,248 (+)NCBIGRCr8
mRatBN7.2916,167,504 - 16,492,826 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl916,167,482 - 16,492,167 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx924,761,163 - 24,969,039 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0929,823,843 - 30,032,066 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0928,124,579 - 28,332,468 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0918,564,743 - 18,773,092 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl918,564,927 - 18,773,092 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0917,448,142 - 17,658,373 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4911,869,234 - 12,025,219 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1911,867,896 - 11,943,304 (+)NCBI
Celera913,904,221 - 14,111,920 (+)NCBICelera
Cytogenetic Map9q13NCBI
Runx2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543710,598,145 - 10,800,560 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543710,598,145 - 10,885,858 (+)NCBIChiLan1.0ChiLan1.0
RUNX2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2559,818,489 - 60,045,725 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1655,684,505 - 55,911,773 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0645,003,962 - 45,133,148 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1646,189,426 - 46,411,889 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl646,189,432 - 46,524,389 (+)Ensemblpanpan1.1panPan2
Runx2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494649,141,956 - 49,373,718 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647614,695,965 - 14,905,157 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647614,695,965 - 14,818,246 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RUNX2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl740,106,532 - 40,460,687 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1740,106,581 - 40,353,304 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2746,278,416 - 46,417,291 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RUNX2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11726,679,386 - 26,807,812 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1726,683,175 - 26,807,319 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604445,423,449 - 45,552,140 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Runx2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475414,679,974 - 14,867,729 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475414,601,574 - 14,868,469 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in RUNX2
1464 total Variants

Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_038491951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038491952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038491954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038491955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038491956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038491957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038491958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038491959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038491960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038491961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038554213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038554214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038554215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038554216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038554218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038554219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038554220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038554221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038554222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038554223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673582 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038683677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038683678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038683679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005334033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005334034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005367770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005367771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005402142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005402143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB674578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY308819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY738265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000003180   ⟹   ENSCAFP00000002954
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1213,723,607 - 13,840,785 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000050131   ⟹   ENSCAFP00000042290
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1213,628,539 - 13,840,785 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845022161   ⟹   ENSCAFP00845017425
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1214,117,254 - 14,343,174 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845022178   ⟹   ENSCAFP00845017437
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1214,117,254 - 14,343,174 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845022244   ⟹   ENSCAFP00845017494
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1214,220,230 - 14,450,732 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845022268   ⟹   ENSCAFP00845017513
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1214,220,230 - 14,449,074 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845022293   ⟹   ENSCAFP00845017531
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1214,220,230 - 14,449,074 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845022314   ⟹   ENSCAFP00845017548
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1214,220,230 - 14,368,986 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845022331   ⟹   ENSCAFP00845017559
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1214,220,230 - 14,311,959 (+)Ensembl
RefSeq Acc Id: XM_038491951   ⟹   XP_038347879
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11213,641,544 - 13,860,345 (+)NCBI
RefSeq Acc Id: XM_038491952   ⟹   XP_038347880
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11213,641,551 - 13,860,345 (+)NCBI
RefSeq Acc Id: XM_038491954   ⟹   XP_038347882
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11213,641,543 - 13,860,345 (+)NCBI
RefSeq Acc Id: XM_038491955   ⟹   XP_038347883
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11213,641,542 - 13,860,345 (+)NCBI
RefSeq Acc Id: XM_038491956   ⟹   XP_038347884
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11213,641,539 - 13,861,073 (+)NCBI
RefSeq Acc Id: XM_038491957   ⟹   XP_038347885
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11213,641,535 - 13,967,483 (+)NCBI
RefSeq Acc Id: XM_038491958   ⟹   XP_038347886
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11213,641,536 - 13,856,894 (+)NCBI
RefSeq Acc Id: XM_038491959   ⟹   XP_038347887
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11213,641,537 - 13,827,829 (+)NCBI
RefSeq Acc Id: XM_038491960   ⟹   XP_038347888
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11213,641,537 - 13,964,612 (+)NCBI
RefSeq Acc Id: XM_038491961   ⟹   XP_038347889
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11213,641,536 - 13,885,703 (+)NCBI
RefSeq Acc Id: XM_038554213   ⟹   XP_038410141
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01213,825,179 - 14,044,120 (+)NCBI
RefSeq Acc Id: XM_038554214   ⟹   XP_038410142
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01213,825,186 - 14,044,120 (+)NCBI
RefSeq Acc Id: XM_038554215   ⟹   XP_038410143
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01213,825,178 - 14,044,120 (+)NCBI
RefSeq Acc Id: XM_038554216   ⟹   XP_038410144
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01213,825,177 - 14,044,120 (+)NCBI
RefSeq Acc Id: XM_038554218   ⟹   XP_038410146
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01213,825,174 - 14,045,190 (+)NCBI
RefSeq Acc Id: XM_038554219   ⟹   XP_038410147
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01213,825,170 - 14,151,515 (+)NCBI
RefSeq Acc Id: XM_038554220   ⟹   XP_038410148
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01213,825,171 - 14,041,003 (+)NCBI
RefSeq Acc Id: XM_038554221   ⟹   XP_038410149
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01213,825,172 - 14,011,668 (+)NCBI
RefSeq Acc Id: XM_038554222   ⟹   XP_038410150
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01213,825,172 - 14,148,634 (+)NCBI
RefSeq Acc Id: XM_038554223   ⟹   XP_038410151
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01213,825,171 - 14,069,630 (+)NCBI
RefSeq Acc Id: XM_038618080   ⟹   XP_038474008
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01213,729,546 - 13,948,290 (+)NCBI
RefSeq Acc Id: XM_038618081   ⟹   XP_038474009
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01213,729,553 - 13,948,290 (+)NCBI
RefSeq Acc Id: XM_038618082   ⟹   XP_038474010
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01213,729,545 - 13,948,290 (+)NCBI
RefSeq Acc Id: XM_038618083   ⟹   XP_038474011
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01213,729,544 - 13,948,290 (+)NCBI
RefSeq Acc Id: XM_038618084   ⟹   XP_038474012
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01213,729,541 - 13,949,360 (+)NCBI
RefSeq Acc Id: XM_038618085   ⟹   XP_038474013
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01213,729,537 - 14,055,648 (+)NCBI
RefSeq Acc Id: XM_038618086   ⟹   XP_038474014
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01213,729,538 - 13,945,178 (+)NCBI
RefSeq Acc Id: XM_038618088   ⟹   XP_038474016
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01213,729,539 - 13,915,737 (+)NCBI
RefSeq Acc Id: XM_038618089   ⟹   XP_038474017
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01213,729,539 - 14,052,765 (+)NCBI
RefSeq Acc Id: XM_038618090   ⟹   XP_038474018
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01213,729,538 - 13,973,796 (+)NCBI
RefSeq Acc Id: XM_038673582   ⟹   XP_038529510
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1213,657,405 - 13,875,716 (+)NCBI
RefSeq Acc Id: XM_038673587   ⟹   XP_038529515
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1213,657,412 - 13,875,716 (+)NCBI
RefSeq Acc Id: XM_038673596   ⟹   XP_038529524
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1213,657,403 - 13,875,716 (+)NCBI
RefSeq Acc Id: XM_038683677   ⟹   XP_038539605
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01214,116,777 - 14,343,464 (+)NCBI
RefSeq Acc Id: XM_038683678   ⟹   XP_038539606
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01214,116,784 - 14,343,464 (+)NCBI
RefSeq Acc Id: XM_038683679   ⟹   XP_038539607
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01214,116,775 - 14,343,464 (+)NCBI
RefSeq Acc Id: XR_005334033
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11213,641,536 - 13,856,807 (+)NCBI
RefSeq Acc Id: XR_005334034
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11213,641,537 - 13,856,815 (+)NCBI
RefSeq Acc Id: XR_005367770
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01213,825,171 - 14,040,916 (+)NCBI
RefSeq Acc Id: XR_005367771
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01213,825,172 - 14,040,924 (+)NCBI
RefSeq Acc Id: XR_005402142
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01213,729,538 - 13,945,091 (+)NCBI
RefSeq Acc Id: XR_005402143
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01213,729,539 - 13,945,099 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038347879 (Get FASTA)   NCBI Sequence Viewer  
  XP_038347880 (Get FASTA)   NCBI Sequence Viewer  
  XP_038347882 (Get FASTA)   NCBI Sequence Viewer  
  XP_038347883 (Get FASTA)   NCBI Sequence Viewer  
  XP_038347884 (Get FASTA)   NCBI Sequence Viewer  
  XP_038347885 (Get FASTA)   NCBI Sequence Viewer  
  XP_038347886 (Get FASTA)   NCBI Sequence Viewer  
  XP_038347887 (Get FASTA)   NCBI Sequence Viewer  
  XP_038347888 (Get FASTA)   NCBI Sequence Viewer  
  XP_038347889 (Get FASTA)   NCBI Sequence Viewer  
  XP_038410141 (Get FASTA)   NCBI Sequence Viewer  
  XP_038410142 (Get FASTA)   NCBI Sequence Viewer  
  XP_038410143 (Get FASTA)   NCBI Sequence Viewer  
  XP_038410144 (Get FASTA)   NCBI Sequence Viewer  
  XP_038410146 (Get FASTA)   NCBI Sequence Viewer  
  XP_038410147 (Get FASTA)   NCBI Sequence Viewer  
  XP_038410148 (Get FASTA)   NCBI Sequence Viewer  
  XP_038410149 (Get FASTA)   NCBI Sequence Viewer  
  XP_038410150 (Get FASTA)   NCBI Sequence Viewer  
  XP_038410151 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474008 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474009 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474010 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474011 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474012 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474013 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474014 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474016 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474017 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474018 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529510 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529515 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529524 (Get FASTA)   NCBI Sequence Viewer  
  XP_038539605 (Get FASTA)   NCBI Sequence Viewer  
  XP_038539606 (Get FASTA)   NCBI Sequence Viewer  
  XP_038539607 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAU87902 (Get FASTA)   NCBI Sequence Viewer  
  BAL04118 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000002954.5
  ENSCAFP00000042290.3
  ENSCAFP00000067402.1
  ENSCAFP00000069994.1
  ENSCAFP00000072398.1
  ENSCAFP00000074631.1
  ENSCAFP00000075095.1
  ENSCAFP00030012007.1
  ENSCAFP00040019545.1
  ENSCAFP00040019651.1
  ENSCAFP00845017425
  ENSCAFP00845017425.1
  ENSCAFP00845017437
  ENSCAFP00845017437.1
  ENSCAFP00845017494.1
  ENSCAFP00845017513.1
  ENSCAFP00845017531.1
  ENSCAFP00845017548.1
  ENSCAFP00845017559.1
RefSeq Acc Id: XP_038347885   ⟸   XM_038491957
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038347889   ⟸   XM_038491961
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038347886   ⟸   XM_038491958
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038347888   ⟸   XM_038491960
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038347887   ⟸   XM_038491959
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038347884   ⟸   XM_038491956
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038347883   ⟸   XM_038491955
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038347882   ⟸   XM_038491954
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038347879   ⟸   XM_038491951
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038347880   ⟸   XM_038491952
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038474013   ⟸   XM_038618085
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038474018   ⟸   XM_038618090
- Peptide Label: isoform X15
RefSeq Acc Id: XP_038474014   ⟸   XM_038618086
- Peptide Label: isoform X13
RefSeq Acc Id: XP_038474017   ⟸   XM_038618089
- Peptide Label: isoform X14
RefSeq Acc Id: XP_038474016   ⟸   XM_038618088
- Peptide Label: isoform X14
RefSeq Acc Id: XP_038474012   ⟸   XM_038618084
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038474011   ⟸   XM_038618083
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038474010   ⟸   XM_038618082
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038474008   ⟸   XM_038618080
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038474009   ⟸   XM_038618081
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038539607   ⟸   XM_038683679
- Peptide Label: isoform X3
- UniProtKB: A0A8C0ML87 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038539605   ⟸   XM_038683677
- Peptide Label: isoform X1
- UniProtKB: A0A8C0ML87 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038539606   ⟸   XM_038683678
- Peptide Label: isoform X2
- UniProtKB: A0A8I3NCM7 (UniProtKB/TrEMBL),   A0A8P0NSZ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038529524   ⟸   XM_038673596
- Peptide Label: isoform X3
- UniProtKB: A0A8C0ML87 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038529510   ⟸   XM_038673582
- Peptide Label: isoform X1
- UniProtKB: A0A8C0ML87 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038529515   ⟸   XM_038673587
- Peptide Label: isoform X2
- UniProtKB: A0A8I3NCM7 (UniProtKB/TrEMBL),   A0A8P0NSZ1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038410147   ⟸   XM_038554219
- Peptide Label: isoform X18
- UniProtKB: A0A8I3NIZ2 (UniProtKB/TrEMBL),   A0A8P0PGC0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038410151   ⟸   XM_038554223
- Peptide Label: isoform X21
RefSeq Acc Id: XP_038410148   ⟸   XM_038554220
- Peptide Label: isoform X19
RefSeq Acc Id: XP_038410150   ⟸   XM_038554222
- Peptide Label: isoform X20
RefSeq Acc Id: XP_038410149   ⟸   XM_038554221
- Peptide Label: isoform X20
RefSeq Acc Id: XP_038410146   ⟸   XM_038554218
- Peptide Label: isoform X17
- UniProtKB: A0A8C0ML87 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038410144   ⟸   XM_038554216
- Peptide Label: isoform X16
- UniProtKB: A0A8C0ML87 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038410143   ⟸   XM_038554215
- Peptide Label: isoform X3
- UniProtKB: A0A8C0ML87 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038410141   ⟸   XM_038554213
- Peptide Label: isoform X1
- UniProtKB: A0A8C0ML87 (UniProtKB/TrEMBL),   A0A8C0SD20 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038410142   ⟸   XM_038554214
- Peptide Label: isoform X2
- UniProtKB: A0A8C0SD73 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00000002954   ⟸   ENSCAFT00000003180
RefSeq Acc Id: ENSCAFP00000042290   ⟸   ENSCAFT00000050131
RefSeq Acc Id: ENSCAFP00845017548   ⟸   ENSCAFT00845022314
RefSeq Acc Id: ENSCAFP00845017437   ⟸   ENSCAFT00845022178
RefSeq Acc Id: ENSCAFP00845017494   ⟸   ENSCAFT00845022244
RefSeq Acc Id: ENSCAFP00845017513   ⟸   ENSCAFT00845022268
RefSeq Acc Id: ENSCAFP00845017425   ⟸   ENSCAFT00845022161
RefSeq Acc Id: ENSCAFP00845017531   ⟸   ENSCAFT00845022293
RefSeq Acc Id: ENSCAFP00845017559   ⟸   ENSCAFT00845022331
Protein Domains
Runt   Runx C-terminal


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000002008 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030007140 UniProtKB/TrEMBL
  ENSCAFG00040012246 UniProtKB/TrEMBL
  ENSCAFG00845012369 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000003180.5 UniProtKB/TrEMBL
  ENSCAFT00000050131.4 UniProtKB/TrEMBL
  ENSCAFT00000099180.1 UniProtKB/TrEMBL
  ENSCAFT00000101668.1 UniProtKB/TrEMBL
  ENSCAFT00000104993.1 UniProtKB/TrEMBL
  ENSCAFT00000108939.1 UniProtKB/TrEMBL
  ENSCAFT00000109594.1 UniProtKB/TrEMBL
  ENSCAFT00030013756.1 UniProtKB/TrEMBL
  ENSCAFT00040022561.1 UniProtKB/TrEMBL
  ENSCAFT00040022679.1 UniProtKB/TrEMBL
  ENSCAFT00845022161 ENTREZGENE
  ENSCAFT00845022161.1 UniProtKB/TrEMBL
  ENSCAFT00845022178 ENTREZGENE
  ENSCAFT00845022178.1 UniProtKB/TrEMBL
  ENSCAFT00845022244.1 UniProtKB/TrEMBL
  ENSCAFT00845022268.1 UniProtKB/TrEMBL
  ENSCAFT00845022293.1 UniProtKB/TrEMBL
  ENSCAFT00845022314.1 UniProtKB/TrEMBL
  ENSCAFT00845022331.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.720 UniProtKB/TrEMBL
InterPro AML1_Runt UniProtKB/TrEMBL
  p53-like_TF_DNA-bd UniProtKB/TrEMBL
  p53/RUNT-type_TF_DNA-bd_sf UniProtKB/TrEMBL
  Runt_dom UniProtKB/TrEMBL
  Runx_central_dom_sf UniProtKB/TrEMBL
  RunxI_C_dom UniProtKB/TrEMBL
  TF_Runt-rel_RUNX UniProtKB/TrEMBL
NCBI Gene LOC449531 ENTREZGENE
PANTHER PTHR11950 UniProtKB/TrEMBL
  RUNT-RELATED TRANSCRIPTION FACTOR 2 UniProtKB/TrEMBL
Pfam Runt UniProtKB/TrEMBL
  RunxI UniProtKB/TrEMBL
PIRSF TF_Runt-rel_RUNX UniProtKB/TrEMBL
PRINTS ONCOGENEAML1 UniProtKB/TrEMBL
PROSITE RUNT UniProtKB/TrEMBL
Superfamily-SCOP beta-sandwich domain of Sec23/24 UniProtKB/TrEMBL
  SSF49417 UniProtKB/TrEMBL
UniProt A0A8C0ML87 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SD20 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SD73 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NCM7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NCN6_CANLF UniProtKB/TrEMBL
  A0A8I3NH29_CANLF UniProtKB/TrEMBL
  A0A8I3NIZ2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NMA8_CANLF UniProtKB/TrEMBL
  A0A8I3NXS1_CANLF UniProtKB/TrEMBL
  A0A8I3RZG3_CANLF UniProtKB/TrEMBL
  A0A8P0N553_CANLF UniProtKB/TrEMBL
  A0A8P0NSZ1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PGC0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PJJ5_CANLF UniProtKB/TrEMBL
  A0A8P0PRW2_CANLF UniProtKB/TrEMBL
  A0A8P0PRZ3_CANLF UniProtKB/TrEMBL
  A0A8P0TSC1_CANLF UniProtKB/TrEMBL
  G3XKX1_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:111707 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-14 RUNX2  RUNX family transcription factor 2  LOC102156311  runt-related transcription factor 2-like  Data merged from RGD:12353944 737654 PROVISIONAL
2021-01-14 RUNX2  RUNX family transcription factor 2  RUNX2  RUNX family transcription factor 2  Data merged from RGD:12384713 737654 PROVISIONAL
2021-01-12 RUNX2  RUNX family transcription factor 2  LOC449531  uncharacterized LOC449531  Symbol and/or name change 5135510 APPROVED
2019-04-09 RUNX2  RUNX family transcription factor 2    runt related transcription factor 2  Symbol and/or name change 5135510 APPROVED
2017-09-12 LOC102156311  runt-related transcription factor 2-like    uncharacterized LOC102156311  Symbol and/or name change 5135510 APPROVED