STX7 (syntaxin 7) - Rat Genome Database

Name: STX7
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: STX7 (syntaxin 7) Canis lupus familiaris

Analyze

Symbol:

STX7

Name:

syntaxin 7

RGD ID:

12317199

Description:

ENCODES a protein that exhibits protein-containing complex binding (ortholog); SNARE binding (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); synaptic vesicle to endosome fusion (ortholog); vesicle fusion (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN endosome (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

LOC106559538; syntaxin-7; syntaxin-7-like; uncharacterized LOC106559538

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	STX7 (syntaxin 7)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Stx7 (syntaxin 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Stx7 (syntaxin 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Stx7 (syntaxin 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	STX7 (syntaxin 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Stx7 (syntaxin 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	STX7 (syntaxin 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	STX7 (syntaxin 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Stx7 (syntaxin 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	25,544,283 - 25,607,179 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	25,546,596 - 25,607,231 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	26,531,632 - 26,594,249 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	25,455,483 - 25,518,496 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	25,458,138 - 25,518,571 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	25,501,729 - 25,564,656 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	25,400,189 - 25,462,818 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	25,663,904 - 25,726,563 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

endosome to lysosome transport (ISO)

intracellular protein transport (IEA)

membrane fusion (IEA)

organelle assembly (IEA)

organelle localization (IEA)

positive regulation of receptor localization to synapse (IEA)

positive regulation of T cell mediated cytotoxicity (IEA)

regulation of protein localization to plasma membrane (IEA)

synaptic vesicle to endosome fusion (ISO)

vesicle docking (IEA)

vesicle fusion (IEA,ISO)

vesicle-mediated transport (IEA,ISO)

Cellular Component

azurophil granule (IEA)

early endosome (IEA)

early endosome membrane (IEA)

endocytic vesicle (IEA)

endomembrane system (IEA)

endosome (IEA,ISO)

immunological synapse (IEA)

late endosome (IEA)

late endosome membrane (ISO)

lysosomal membrane (ISO)

lysosome (IEA)

membrane (IEA)

perinuclear region of cytoplasm (IEA)

plasma membrane (IEA)

recycling endosome (IEA)

SNARE complex (IEA,ISO)

synaptic vesicle (IEA)

synaptic vesicle membrane (ISO)

tertiary granule (IEA)

vesicle (IEA)

Molecular Function

chloride channel inhibitor activity (IEA)

protein binding (ISO)

protein-containing complex binding (ISO)

SNAP receptor activity (IEA)

SNARE binding (IEA,ISO)

syntaxin binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

STX7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	25,544,283 - 25,607,179 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	25,546,596 - 25,607,231 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	26,531,632 - 26,594,249 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	25,455,483 - 25,518,496 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	25,458,138 - 25,518,571 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	25,501,729 - 25,564,656 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	25,400,189 - 25,462,818 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	25,663,904 - 25,726,563 (-)	NCBI		UU_Cfam_GSD_1.0

STX7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	132,445,867 - 132,513,472 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	132,445,867 - 132,513,198 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	132,767,006 - 132,834,611 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	132,822,848 - 132,875,859 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	132,822,847 - 132,875,859	NCBI
Celera	6	133,525,518 - 133,581,174 (-)	NCBI		Celera
Cytogenetic Map	6	q23.2	NCBI
HuRef	6	130,353,519 - 130,409,169 (-)	NCBI		HuRef
CHM1_1	6	133,042,339 - 133,098,018 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	133,640,859 - 133,708,445 (-)	NCBI		T2T-CHM13v2.0

Stx7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	24,025,182 - 24,064,859 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	24,025,200 - 24,066,120 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	24,149,289 - 24,188,961 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	24,149,302 - 24,190,222 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	23,869,123 - 23,908,765 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	23,838,776 - 23,878,375 (+)	NCBI		MGSCv36	mm8
Celera	10	25,082,517 - 25,122,173 (+)	NCBI		Celera
Cytogenetic Map	10	A4	NCBI
cM Map	10	11.45	NCBI

Stx7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	23,016,330 - 23,056,579 (-)	NCBI		GRCr8
mRatBN7.2	1	21,197,075 - 21,237,320 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	21,197,075 - 21,237,279 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	20,973,496 - 21,014,331 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	26,973,523 - 27,014,359 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	21,173,353 - 21,214,086 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	22,241,655 - 22,281,850 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	22,241,661 - 22,281,788 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	23,721,812 - 23,762,002 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	21,721,897 - 21,762,024 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	21,724,841 - 21,764,969 (-)	NCBI
Celera	1	19,947,867 - 19,987,994 (-)	NCBI		Celera
Cytogenetic Map	1	p12	NCBI

Stx7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955436	12,928,274 - 12,975,745 (-)	NCBI	ChiLan1.0	ChiLan1.0

STX7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	152,440,392 - 152,495,586 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	150,345,389 - 150,402,661 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	130,232,041 - 130,289,326 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	134,342,305 - 134,397,533 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	134,342,304 - 134,398,215 (-)	Ensembl	panpan1.1		panPan2

Stx7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	120,685,451 - 120,733,071 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936560	464,617 - 513,009 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936560	464,667 - 512,322 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STX7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	31,184,947 - 31,235,865 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	31,184,905 - 31,237,052 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	34,705,635 - 34,757,859 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

STX7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	41,029,992 - 41,086,589 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	41,030,073 - 41,088,308 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	13,220,150 - 13,275,468 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Stx7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624753	6,514,056 - 6,547,480 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624753	6,511,516 - 6,554,406 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in STX7
896 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	5	5	22	6	6	6	6	5	12		10	6
Low								1		8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022417138	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022417144	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022417146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022417149	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022417151	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038465417	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038465418	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038465419	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038465420	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038465421	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038465423	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038465424	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038491163	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038526032	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038526033	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038590333	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038590334	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038654151	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038654152	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038654153	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038654154	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038654155	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038654156	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038654157	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_854089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005353502	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005353503	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005388084	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005388085	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000000293 ⟹ ENSCAFP00000000264

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	25,562,050 - 25,603,666 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000073235 ⟹ ENSCAFP00000049771

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	25,563,593 - 25,607,231 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000075508 ⟹ ENSCAFP00000064384

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	25,563,593 - 25,603,666 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000080751 ⟹ ENSCAFP00000047795

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	25,546,596 - 25,603,666 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000082407 ⟹ ENSCAFP00000056565

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	25,546,596 - 25,607,231 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000086594 ⟹ ENSCAFP00000057836

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	25,562,005 - 25,607,231 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000089751 ⟹ ENSCAFP00000046493

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	25,546,596 - 25,585,002 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845008287 ⟹ ENSCAFP00845006519

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	25,458,138 - 25,518,026 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845008296 ⟹ ENSCAFP00845006527

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	25,470,655 - 25,518,571 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845008305 ⟹ ENSCAFP00845006535

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	25,470,655 - 25,518,444 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845008309 ⟹ ENSCAFP00845006538

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	25,470,655 - 25,496,535 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845008318 ⟹ ENSCAFP00845006545

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	25,475,010 - 25,518,026 (-)	Ensembl

RefSeq Acc Id:

XM_022417138 ⟹ XP_022272846

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	25,544,283 - 25,607,179 (-)	NCBI
Dog10K_Boxer_Tasha	1	26,531,632 - 26,594,249 (-)	NCBI

Sequence:

show sequence

CTCCCCAGAGCCGGGTCGCGGGCATGCGCACTGGGCGTCCCAGTGCCACCGCCCATCAGCTGAG
AACCGTAGCTGGGGGTCGGGTGCCGGTGGGTGCGGCTGGCCCGAGGAGGAGGAGGCGGGCGCGG
AGGAGCCGGGCTGTGGAAATACAGAGGAGTCTGAATCAACTTGGAACACCTCAAGATTCACCTG
AACTGAGGCAACAGCTGCAACAGAAGCAGCAGTATACTAATCAACTTGCCAAAGAAACAGATAA
GTACATTAAAGAGTTTGGATCTCTGCCCACCACCCCCAGTGAACAGCGTCAAAGGAAAATACAG
AAGGATCGCTTAGTAGCTGAATTCACAACGTCACTGACAAACTTCCAAAAGGTCCAGAGGCAAG
CCGCTGAAAAAGAGAAAGAGTTTGTTGCTCGAGTGAGAGCCAGCTCTAGAGTATCTGGTGGTTT
TCCTGAAGACAGCTCAAAGGAAAGGAATCTCGTTTCCTGGGAAAGCCAAGCTCAACCTCAGGTA
CAGGTGCAGGAGGAAGAAATTACAGAAGATGACCTCCGCCTTATTCATGAGAGAGAATCTTCCA
TTAGGCAACTTGAAGCTGATATTATGGATATTAATGAAATATTTAAAGATTTGGGAATGATGAT
TCATGAGCAAGGAGATGTGATAGACAGCATAGAAGCCAATGTGGAAAGTGCAGACGTGCATGTT
CAGCAAGCAAACCAGCAGCTGTCAAGGGCAGCAGAGTATCAGGGTCAGCTTTTGCTAAGTAACA
GCCTGAATGGGAACCAGACAACAGCTAGTGTTGGACATACCAGAATTCTCCAGGAAGAGCCACA
TCCACTGAGAGTCACCTGGTTGCTTTCAGAGCAAGAAATGACCAGCAATATAGCCCTACTTCTG
CAATCAACAGCCTCTAGTGACTGATGAGGAGATGCTAGTGTTCTGTTTCCCACAAGAGTCTCCC
AGACATATGGCAGGGCTGAAGGATGCCTTGGTGGTCCTGTTGGCTAGTCAGCAGAGAGAGTGGG
AATAATAAAGCTCAGACCTTCTAAACAACACCATCAGAACATGAAGATTTTATAGAAGTATGAA
ATGATGCTAAAGATATGATGTAAGTAAAAAATAGGATACAAAATTGTATGTTTCTTTTGCCCAC
AACAATTTAAATTCCACAGTTCTATGTTCTGGAAGAAGGAATATACCTTCTGTGACTCCTACTC
TTCCTGCCTTGCCCTGCTGCCCTGAGTCAGGGGTTTTTACCTCAAGTAGTAAAGAATGGTTAAA
GCCA

hide sequence

RefSeq Acc Id:

XM_022417144 ⟹ XP_022272852

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	25,544,283 - 25,607,168 (-)	NCBI
Dog10K_Boxer_Tasha	1	26,531,902 - 26,594,241 (-)	NCBI

Sequence:

show sequence

CGGGTCGCGGGCATGCGCACTGGGCGTCCCAGTGCCACCGCCCATCAGCTGAGAACCGTAGCTG
GGGGTCGGGTGCCGGTGGGTGCGGCTGGCCCGAGGAGGAGGAGGCGGGCGCGGAGGAGCCGGGT
TTTTTAGGTGACTGCATAGAAAACTGCCCAACCTGCCAACATCTGATGAAATTAGTGACTAAGC
AAATCAACTATGTCTTACACTGTGGGAGTTGGTGGTGACCCTGCTCTACTGGCCCAGCGTATCT
CTTCTAACATCCAGAAGATCACACAATGTTCTGTGGAAATACAGAGGAGTCTGAATCAACTTGG
AACACCTCAAGATTCACCTGAACTGAGGCAACAGCTGCAACAGAAGCAGCAGTATACTAATCAA
CTTGCCAAAGAAACAGATAAGTACATTAAAGAGTTTGGATCTCTGCCCACCACCCCCAGTGAAC
AGCGTCAAAGGAAAATACAGAAGGATCGCTTAGTAGCTGAATTCACAACGTCACTGACAAACTT
CCAAAAGGTCCAGAGGCAAGCCGCTGAAAAAGAGAAAGAGTTTGTTGCTCGAGTGAGAGCCAGC
TCTAGAGTATCTGGTGGTTTTCCTGAAGACAGCTCAAAGGAAAGGAATCTCGTTTCCTGGGAAA
GCCAAGCTCAACCTCAGGTACAGGTGCAGGAGGAAGAAATTACAGAAGATGACCTCCGCCTTAT
TCATGAGAGAGAATCTTCCATTAGGCAACTTGAAGCTGATATTATGGATATTAATGAAATATTT
AAAGATTTGGGAATGATGATTCATGAGCAAGGAGATGTGATAGACAGCATAGAAGCCAATGTGG
AAAGTGCAGACGTGCATGTTCAGCAAGCAAACCAGCAGCTGTCAAGGGCAGCAGAGTATCAGGG
TCAGCTTTTGCTAAGTAACAGCCTGAATGGGAACCAGACAACAGCTAGTGTTGGACATACCAGA
ATTCTCCAGGAAGAGCCACATCCACTGAGAGTCACCTGGTTGCTTTCAGAGCAAGAAATGACCA
GCAATATAGCCCTACTTCTGCAATCAACAGCCTCTAGTGACTGATGAGGAGATGCTAGTGTTCT
GTTTCCCACAAGAGTCTCCCAGACATATGGCAGGGCTGAAGGATGCCTTGGTGGTCCTGTTGGC
TAGTCAGCAGAGAGAGTGGGAATAATAAAGCTCAGACCTTCTAAACAACACCATCAGAACATGA
AGATTTTATAGAAGTATGAAATGATGCTAAAGATATGATGTAAGTAAAAAATAGGATACAAAAT
TGTATGTTTCTTTTGCCCACAACAATTTAAATTCCACAGTTCTATGTTCTGGAAGAAGGAATAT
ACCTTCTGTGACTCCTACTCTTCCTGCCTTGCCCTGCTGCCCTGAGTCAGGGGTTTTTACCTCA
AGTAGTAAAGAATGGTTAAAGCCA

hide sequence

RefSeq Acc Id:

XM_022417146 ⟹ XP_022272854

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	25,544,283 - 25,607,172 (-)	NCBI
Dog10K_Boxer_Tasha	1	26,531,886 - 26,594,241 (-)	NCBI

Sequence:

show sequence

GAGCCGGGTCGCGGGCATGCGCACTGGGCGTCCCAGTGCCACCGCCCATCAGCTGAGAACCGTA
GCTGGGGGTCGGGTGCCGGTGGGTGCGGCTGGCCCGAGGAGGAGGAGGCGGGCGCGGAGGAGCC
GGGAGGAACTGAAACTGGATGGCTGGAGAGTAAAGGAACCGTGTAACATCTGTCCCTTCGGAGG
CTCCTTGCGGTTGGTTTTCTGTCTGGCTTCAAGACACGCTACCTTTTCTTTGATCTCAGTTTTT
TTAGGTGACTGCATAGAAAACTGCCCAACCTGCCAACATCTGATGAAATTAGTGACTAAGCAAA
TCAACTATGTCTTACACTGTGGGAGTTGGTGGTGACCCTGCTCTACTGGCCCAGCGTATCTCTT
CTAACATCCAGAAGATCACACAATGTTCTGTGGAAATACAGAGGAGTCTGAATCAACTTGGAAC
ACCTCAAGATTCACCTGAACTGAGGCAACAGCTGCAACAGAAGCAGCAGTATACTAATCAACTT
GCCAAAGAAACAGATAAGTACATTAAAGAGTTTGGATCTCTGCCCACCACCCCCAGTGAACAGC
GTCAAAGGAAAATACAGAAGGATCGCTTAGTAGCTGAATTCACAACGTCACTGACAAACTTCCA
AAAGGTCCAGAGGCAAGCCGCTGAAAAAGAGAAAGAGTTTGTTGCTCGAGTGAGAGCCAGCTCT
AGAGTATCTGGTGGTTTTCCTGAAGACAGCTCAAAGGAAAGGAATCTCGTTTCCTGGGAAAGCC
AAGCTCAACCTCAGGTACAGGTGCAGGAGGAAGAAATTACAGAAGATGACCTCCGCCTTATTCA
TGAGAGAGAATCTTCCATTAGGCAACTTGAAGCTGATATTATGGATATTAATGAAATATTTAAA
GATTTGGGAATGATGATTCATGAGCAAGGAGATGTGATAGACAGCATAGAAGCCAATGTGGAAA
GTGCAGACGTGCATGTTCAGCAAGCAAACCAGCAGCTGTCAAGGGCAGCAGAGTATCAGGGTCA
GCTTTTGCTAAGTAACAGCCTGAATGGGAACCAGACAACAGCTAGTGTTGGACATACCAGAATT
CTCCAGGAAGAGCCACATCCACTGAGAGTCACCTGGTTGCTTTCAGAGCAAGAAATGACCAGCA
ATATAGCCCTACTTCTGCAATCAACAGCCTCTAGTGACTGATGAGGAGATGCTAGTGTTCTGTT
TCCCACAAGAGTCTCCCAGACATATGGCAGGGCTGAAGGATGCCTTGGTGGTCCTGTTGGCTAG
TCAGCAGAGAGAGTGGGAATAATAAAGCTCAGACCTTCTAAACAACACCATCAGAACATGAAGA
TTTTATAGAAGTATGAAATGATGCTAAAGATATGATGTAAGTAAAAAATAGGATACAAAATTGT
ATGTTTCTTTTGCCCACAACAATTTAAATTCCACAGTTCTATGTTCTGGAAGAAGGAATATACC
TTCTGTGACTCCTACTCTTCCTGCCTTGCCCTGCTGCCCTGAGTCAGGGGTTTTTACCTCAAGT
AGTAAAGAATGGTTAAAGCCA

hide sequence

RefSeq Acc Id:

XM_022417149 ⟹ XP_022272857

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	25,544,283 - 25,607,179 (-)	NCBI
Dog10K_Boxer_Tasha	1	26,531,648 - 26,594,249 (-)	NCBI

Sequence:

show sequence

CTCCCCAGAGCCGGGTCGCGGGCATGCGCACTGGGCGTCCCAGTGCCACCGCCCATCAGCTGAG
AACCGTAGCTGGGGGTCGGGTGCCGGTGGGTGCGGCTGGCCCGAGGAGGAGGAGGCGGGCGCGG
AGGAGCCGGGCTGTGGAAATACAGAGGAGTCTGAATCAACTTGGAACACCTCAAGATTCACCTG
AACTGAGGCAACAGCTGCAACAGAAGCAGCAGTATACTAATCAACTTGCCAAAGAAACAGATAA
GTACATTAAAGAGTTTGGATCTCTGCCCACCACCCCCAGTGAACAGCGTCAAAGGAAAATACAG
AAGGATCGCTTAGTAGCTGAATTCACAACGTCACTGACAAACTTCCAAAAGGTCCAGAGGCAAG
CCGCTGAAAAAGAGAAAGAGTTTGTTGCTCGAGTGAGAGCCAGCTCTAGAGTATCTGGTGGTTT
TCCTGAAGACAGCTCAAAGGAAAGGAATCTCGTTTCCTGGGAAAGCCAAGCTCAACCTCAGGTA
CAGGTGCAGGAGGAAGAAATTACAGAAGATGACCTCCGCCTTATTCATGAGAGAGAATCTTCCA
TTAGGCAACTTGAAGCTGATATTATGGATATTAATGAAATATTTAAAGATTTGGGAATGATGAT
TCATGAGCAAGGAGATGTGATAGACAGCATAGAAGCCAATGTGGAAAGTGCAGACGTGCATGTT
CAGCAAGCAAACCAGCAGCTGTCAAGGGCAGCAGAGTATCAGGGTCAGCTTTTGCTAAGTAACA
GCCTGAATGGGAACCAGACAACAGCTAGTGTTGGACATACCAGAGCAAGAAATGACCAGCAATA
TAGCCCTACTTCTGCAATCAACAGCCTCTAGTGACTGATGAGGAGATGCTAGTGTTCTGTTTCC
CACAAGAGTCTCCCAGACATATGGCAGGGCTGAAGGATGCCTTGGTGGTCCTGTTGGCTAGTCA
GCAGAGAGAGTGGGAATAATAAAGCTCAGACCTTCTAAACAACACCATCAGAACATGAAGATTT
TATAGAAGTATGAAATGATGCTAAAGATATGATGTAAGTAAAAAATAGGATACAAAATTGTATG
TTTCTTTTGCCCACAACAATTTAAATTCCACAGTTCTATGTTCTGGAAGAAGGAATATACCTTC
TGTGACTCCTACTCTTCCTGCCTTGCCCTGCTGCCCTGAGTCAGGGGTTTTTACCTCAAGTAGT
AAAGAATGGTTAAAGCCA

hide sequence

RefSeq Acc Id:

XM_022417151 ⟹ XP_022272859

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	25,560,781 - 25,607,179 (-)	NCBI
Dog10K_Boxer_Tasha	1	26,548,099 - 26,594,249 (-)	NCBI

Sequence:

show sequence

CTCCCCAGAGCCGGGTCGCGGGCATGCGCACTGGGCGTCCCAGTGCCACCGCCCATCAGCTGAG
AACCGTAGCTGGGGGTCGGGTGCCGGTGGGTGCGGCTGGCCCGAGGAGGAGGAGGCGGGCGCGG
AGGAGCCGGGCTGTGGAAATACAGAGGAGTCTGAATCAACTTGGAACACCTCAAGATTCACCTG
AACTGAGGCAACAGCTGCAACAGAAGCAGCAGTATACTAATCAACTTGCCAAAGAAACAGATAA
GTACATTAAAGAGTTTGGATCTCTGCCCACCACCCCCAGTGAACAGCGTCAAAGGAAAATACAG
AAGGATCGCTTAGTAGCTGAATTCACAACGTCACTGACAAACTTCCAAAAGGTCCAGAGGCAAG
CCGCTGAAAAAGAGAAAGAGTTTGTTGCTCGAGTGAGAGCCAGCTCTAGAGTATCTGGTGGTTT
TCCTGAAGACAGCTCAAAGGAAAGGAATCTCGTTTCCTGGGAAAGCCAAGCTCAACCTCAGGTA
CAGGTGCAGGAGGAAGAAATTACAGAAGATGACCTCCGCCTTATTCATGAGAGAGAATCTTCCA
TTAGGCAACTTGAAGCTGATATTATGGATATTAATGAAATATTTAAAGATTTGGGAATGATGAT
TCATGAGCAAGGAGATGTGATAGACAGCATAGAAGCCAATGTGGAAAGTGCAGACGTGCATGTT
CAGCAAGCAAACCAGCAGCTGTCAAGGGCAGCAGAGTATCAGCGCAAATCCAGAAAAACCCTGT
GCATCATCATTTTTATCATTGTCATCGGAGTTGTAATTCTTGGTCTCATCATATGGAAAGTGAA
AAGCTAAATTATAAAGGAGCACACTATTGCACTACATTCTCTAAATTATGTAGGAGGATTCCTG
TAATCATGGTTTTTATTATTATTATTATTATTATTTTAAAAGTACTTCGTAAAGGATGGCTCCC
AAAACTTTGTTACTTTCATTGGAGAGGGGAGTTTCCTTTAGATTCAATCTGATATTTTCTAACA
CTGAAAGTTTTCCTCATATGACCTCTGGCATTACTTCCATGCTTTTCGATCTAGCAACTGTGAG
GTTTTGTTCACATTGTATATGCCTTTCATTTATAATTTATTTACCCTGTTGACTTAGCTCTTGG
AATGAGTAAATGTAAAGGTGTGTGTGTGTTCCATGTGCATCTGTCTCTGTCACAGAGTGGCATG
CACCCAGATTTGTGTTACTTCAATAAAAAAATCTCAAATTTAATTTCAATTTGGGCCAACAGAG
GAAATATTCTTAATAACTTAAAATAATTAACAGACCTGTTTGTGGTGTTTTTTGTTTTGTTTTT
CTGGTGCATAGCAGCACACATTACCGATTTAACTTTTATTATTGGTTTTCTCTTAAAACTCTTG
TTTACTCTAAATGAAATCAATGAATAATTTCCTAGAGTATCTCATACTCCTGATGTGTATCTGT
TAAGCATTTGCTGTAGATTGCCTCTTAAAATACTAAGGGTAGGTTGTTTTTACATAGACCCTGC
TAAAGTCTGATGTTTGCTGAGATATGTGTAGTCACTAGAAATGTTTAATGTAATTTGAAGGAAG
AGTATGAAAAATCAGTACCTATTGTTAGAAATCTAAAAATCCCAACTTGTTATTTTGCTGTGTA
CTTCCACAGCTATCACTGTGGAAAATTAATTTCCTTCCCTTAAGTCCTTTAAAATGATGGCTAC
ATGTGTATCCTTGGGTCAGAATTACTTTGGGTGAGAAACTTTCCCAGAATCACTGTTTTTGAGC
ACCAACACTTAAAAATTTAATGTTTACCTTGCCTACCATTTTGTACCATCCTTCATTAGAAAAC
AATTTGGATGTTTGCCAATTAACTCACTTGCTTTTTTAAAATCAATGTTGTTTTAATGCACTAA
TCTGAATACTGTAAAGGGGATTATCTTAGTTTATAGTTTGTATTTTATAATGTTCTTATATAGC
AGTTTGATAGTGAAGTCAGTGTTTTACATGGCAAAGCTATTGAGACTTCAAATGGGAACAAATA
AAATATTAAGTAAACTGTATCTTCGCAACCAAAATAAAGATGACTTTAAAAGTGTCTGGA

hide sequence

RefSeq Acc Id:

XM_038465417 ⟹ XP_038321345

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	25,501,729 - 25,564,656 (-)	NCBI

RefSeq Acc Id:

XM_038465418 ⟹ XP_038321346

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	25,501,999 - 25,564,648 (-)	NCBI

RefSeq Acc Id:

XM_038465419 ⟹ XP_038321347

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	25,501,983 - 25,564,648 (-)	NCBI

RefSeq Acc Id:

XM_038465420 ⟹ XP_038321348

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	25,501,745 - 25,564,656 (-)	NCBI

RefSeq Acc Id:

XM_038465421 ⟹ XP_038321349

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	25,518,430 - 25,564,656 (-)	NCBI

RefSeq Acc Id:

XM_038465423 ⟹ XP_038321351

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	25,519,273 - 25,564,648 (-)	NCBI

RefSeq Acc Id:

XM_038465424 ⟹ XP_038321352

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	25,519,735 - 25,564,656 (-)	NCBI

RefSeq Acc Id:

XM_038491163 ⟹ XP_038347091

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	1	26,549,404 - 26,594,249 (-)	NCBI

RefSeq Acc Id:

XM_038526032 ⟹ XP_038381960

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	25,666,297 - 25,726,563 (-)	NCBI

RefSeq Acc Id:

XM_038526033 ⟹ XP_038381961

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	25,680,358 - 25,726,563 (-)	NCBI

RefSeq Acc Id:

XM_038590333 ⟹ XP_038446261

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	25,402,582 - 25,462,818 (-)	NCBI

RefSeq Acc Id:

XM_038590334 ⟹ XP_038446262

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	25,416,639 - 25,462,818 (-)	NCBI

RefSeq Acc Id:

XM_038654151 ⟹ XP_038510079

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	25,455,483 - 25,518,496 (-)	NCBI

RefSeq Acc Id:

XM_038654152 ⟹ XP_038510080

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	25,455,753 - 25,518,488 (-)	NCBI

RefSeq Acc Id:

XM_038654153 ⟹ XP_038510081

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	25,455,737 - 25,518,488 (-)	NCBI

RefSeq Acc Id:

XM_038654154 ⟹ XP_038510082

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	25,455,499 - 25,518,496 (-)	NCBI

RefSeq Acc Id:

XM_038654155 ⟹ XP_038510083

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	25,472,198 - 25,518,496 (-)	NCBI

RefSeq Acc Id:

XM_038654156 ⟹ XP_038510084

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	25,473,041 - 25,518,488 (-)	NCBI

RefSeq Acc Id:

XM_038654157 ⟹ XP_038510085

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	25,473,503 - 25,518,496 (-)	NCBI

RefSeq Acc Id:

XM_854089 ⟹ XP_859182

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	25,561,665 - 25,607,168 (-)	NCBI
Dog10K_Boxer_Tasha	1	26,548,942 - 26,594,241 (-)	NCBI

Sequence:

show sequence

CGGGTCGCGGGCATGCGCACTGGGCGTCCCAGTGCCACCGCCCATCAGCTGAGAACCGTAGCTG
GGGGTCGGGTGCCGGTGGGTGCGGCTGGCCCGAGGAGGAGGAGGCGGGCGCGGAGGAGCCGGGT
TTTTTAGGTGACTGCATAGAAAACTGCCCAACCTGCCAACATCTGATGAAATTAGTGACTAAGC
AAATCAACTATGTCTTACACTGTGGGAGTTGGTGGTGACCCTGCTCTACTGGCCCAGCGTATCT
CTTCTAACATCCAGAAGATCACACAATGTTCTGTGGAAATACAGAGGAGTCTGAATCAACTTGG
AACACCTCAAGATTCACCTGAACTGAGGCAACAGCTGCAACAGAAGCAGCAGTATACTAATCAA
CTTGCCAAAGAAACAGATAAGTACATTAAAGAGTTTGGATCTCTGCCCACCACCCCCAGTGAAC
AGCGTCAAAGGAAAATACAGAAGGATCGCTTAGTAGCTGAATTCACAACGTCACTGACAAACTT
CCAAAAGGTCCAGAGGCAAGCCGCTGAAAAAGAGAAAGAGTTTGTTGCTCGAGTGAGAGCCAGC
TCTAGAGTATCTGGTGGTTTTCCTGAAGACAGCTCAAAGGAAAGGAATCTCGTTTCCTGGGAAA
GCCAAGCTCAACCTCAGGTACAGGTGCAGGAGGAAGAAATTACAGAAGATGACCTCCGCCTTAT
TCATGAGAGAGAATCTTCCATTAGGCAACTTGAAGCTGATATTATGGATATTAATGAAATATTT
AAAGATTTGGGAATGATGATTCATGAGCAAGGAGATGTGATAGACAGCATAGAAGCCAATGTGG
AAAGTGCAGACGTGCATGTTCAGCAAGCAAACCAGCAGCTGTCAAGGGCAGCAGAGTATCAGCG
CAAATCCAGAAAAACCCTGTGCATCATCATTTTTATCATTGTCATCGGAGTTGTAATTCTTGGT
CTCATCATATGGAAAGTGAAAAGCTAAATTATAAAGGAGCACACTATTGCACTACATTCTCTAA
ATTATGTAGGAGGATTCCTGTAATCATGGTTTTTATTATTATTATTATTATTATTTTAAAAGTA
CTTCGTAAAGGATGGCTCCCAAAACTTTGTTACTTTCATTGGAGAGGGGAGTTTCCTTTAGATT
CAATCTGATATTTTCTAACACTGAAAGTTTTCCTCATATGACCTCTGGCATTACTTCCATGCTT
TTCGATCTAGCAACTGTGAGGTTTTGTTCACATTGTATATGCCTTTCATTTATAATTTATTTAC
CCTGTTGACTTAGCTCTTGGAATGAGTAAATGTAAAGGTGTGTGTGTGTTCCATGTGCATCTGT
CTCTGTCACAGAGTGGCATGCACCCAGA

hide sequence

RefSeq Acc Id:

XR_005353502

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	25,663,920 - 25,726,563 (-)	NCBI

RefSeq Acc Id:

XR_005353503

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	25,663,904 - 25,726,095 (-)	NCBI

RefSeq Acc Id:

XR_005388084

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	25,400,205 - 25,462,818 (-)	NCBI

RefSeq Acc Id:

XR_005388085

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	25,400,189 - 25,462,818 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_022272846	(Get FASTA)	NCBI Sequence Viewer
	XP_022272852	(Get FASTA)	NCBI Sequence Viewer
	XP_022272854	(Get FASTA)	NCBI Sequence Viewer
	XP_022272857	(Get FASTA)	NCBI Sequence Viewer
	XP_022272859	(Get FASTA)	NCBI Sequence Viewer
	XP_038321345	(Get FASTA)	NCBI Sequence Viewer
	XP_038321346	(Get FASTA)	NCBI Sequence Viewer
	XP_038321347	(Get FASTA)	NCBI Sequence Viewer
	XP_038321348	(Get FASTA)	NCBI Sequence Viewer
	XP_038321349	(Get FASTA)	NCBI Sequence Viewer
	XP_038321351	(Get FASTA)	NCBI Sequence Viewer
	XP_038321352	(Get FASTA)	NCBI Sequence Viewer
	XP_038347091	(Get FASTA)	NCBI Sequence Viewer
	XP_038381960	(Get FASTA)	NCBI Sequence Viewer
	XP_038381961	(Get FASTA)	NCBI Sequence Viewer
	XP_038446261	(Get FASTA)	NCBI Sequence Viewer
	XP_038446262	(Get FASTA)	NCBI Sequence Viewer
	XP_038510079	(Get FASTA)	NCBI Sequence Viewer
	XP_038510080	(Get FASTA)	NCBI Sequence Viewer
	XP_038510081	(Get FASTA)	NCBI Sequence Viewer
	XP_038510082	(Get FASTA)	NCBI Sequence Viewer
	XP_038510083	(Get FASTA)	NCBI Sequence Viewer
	XP_038510084	(Get FASTA)	NCBI Sequence Viewer
	XP_038510085	(Get FASTA)	NCBI Sequence Viewer
	XP_859182	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000000264.5
	ENSCAFP00000047795.2
	ENSCAFP00000057836.1
	ENSCAFP00030009483.1
	ENSCAFP00030009525.1
	ENSCAFP00030009584.1
	ENSCAFP00030009633.1
	ENSCAFP00040021728.1
	ENSCAFP00040021773.1
	ENSCAFP00040021860.1
	ENSCAFP00040021936.1
	ENSCAFP00845006519
	ENSCAFP00845006519.1
	ENSCAFP00845006527
	ENSCAFP00845006527.1
	ENSCAFP00845006535
	ENSCAFP00845006535.1
	ENSCAFP00845006538.1
	ENSCAFP00845006545.1

RefSeq Acc Id:	XP_859182 ⟸ XM_854089
- Peptide Label:	isoform X6
- UniProtKB:	A0A8C0L6L3 (UniProtKB/TrEMBL), A0A8C0YXM9 (UniProtKB/TrEMBL), A0A8I3MUA1 (UniProtKB/TrEMBL), A0A8C0MFT5 (UniProtKB/TrEMBL), A0A8I3MV58 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSYTVGVGGDPALLAQRISSNIQKITQCSVEIQRSLNQLGTPQDSPELRQQLQQKQQYTNQLAK ETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNFQKVQRQAAEKEKEFVARVRASSRV SGGFPEDSSKERNLVSWESQAQPQVQVQEEEITEDDLRLIHERESSIRQLEADIMDINEIFKDL GMMIHEQGDVIDSIEANVESADVHVQQANQQLSRAAEYQRKSRKTLCIIIFIIVIGVVILGLII WKVKS hide sequence

RefSeq Acc Id:	XP_022272857 ⟸ XM_022417149
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0MNL0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRTGRPSATAHQLRTVAGGRVPVGAAGPRRRRRARRSRAVEIQRSLNQLGTPQDSPELRQQLQQ KQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNFQKVQRQAAEKEKEF VARVRASSRVSGGFPEDSSKERNLVSWESQAQPQVQVQEEEITEDDLRLIHERESSIRQLEADI MDINEIFKDLGMMIHEQGDVIDSIEANVESADVHVQQANQQLSRAAEYQGQLLLSNSLNGNQTT ASVGHTRARNDQQYSPTSAINSL hide sequence

RefSeq Acc Id:	XP_022272846 ⟸ XM_022417138
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MNL0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRTGRPSATAHQLRTVAGGRVPVGAAGPRRRRRARRSRAVEIQRSLNQLGTPQDSPELRQQLQQ KQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNFQKVQRQAAEKEKEF VARVRASSRVSGGFPEDSSKERNLVSWESQAQPQVQVQEEEITEDDLRLIHERESSIRQLEADI MDINEIFKDLGMMIHEQGDVIDSIEANVESADVHVQQANQQLSRAAEYQGQLLLSNSLNGNQTT ASVGHTRILQEEPHPLRVTWLLSEQEMTSNIALLLQSTASSD hide sequence

RefSeq Acc Id:	XP_022272854 ⟸ XM_022417146
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0SKB8 (UniProtKB/TrEMBL), A0A8I3RTN0 (UniProtKB/TrEMBL), A0A8C0MNL0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSYTVGVGGDPALLAQRISSNIQKITQCSVEIQRSLNQLGTPQDSPELRQQLQQKQQYTNQLAK ETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNFQKVQRQAAEKEKEFVARVRASSRV SGGFPEDSSKERNLVSWESQAQPQVQVQEEEITEDDLRLIHERESSIRQLEADIMDINEIFKDL GMMIHEQGDVIDSIEANVESADVHVQQANQQLSRAAEYQGQLLLSNSLNGNQTTASVGHTRILQ EEPHPLRVTWLLSEQEMTSNIALLLQSTASSD hide sequence

RefSeq Acc Id:	XP_022272852 ⟸ XM_022417144
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0SKB8 (UniProtKB/TrEMBL), A0A8I3RTN0 (UniProtKB/TrEMBL), A0A8C0MNL0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSYTVGVGGDPALLAQRISSNIQKITQCSVEIQRSLNQLGTPQDSPELRQQLQQKQQYTNQLAK ETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNFQKVQRQAAEKEKEFVARVRASSRV SGGFPEDSSKERNLVSWESQAQPQVQVQEEEITEDDLRLIHERESSIRQLEADIMDINEIFKDL GMMIHEQGDVIDSIEANVESADVHVQQANQQLSRAAEYQGQLLLSNSLNGNQTTASVGHTRILQ EEPHPLRVTWLLSEQEMTSNIALLLQSTASSD hide sequence

RefSeq Acc Id:	XP_022272859 ⟸ XM_022417151
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0MC62 (UniProtKB/TrEMBL), A0A8I3MNH2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRTGRPSATAHQLRTVAGGRVPVGAAGPRRRRRARRSRAVEIQRSLNQLGTPQDSPELRQQLQQ KQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNFQKVQRQAAEKEKEF VARVRASSRVSGGFPEDSSKERNLVSWESQAQPQVQVQEEEITEDDLRLIHERESSIRQLEADI MDINEIFKDLGMMIHEQGDVIDSIEANVESADVHVQQANQQLSRAAEYQRKSRKTLCIIIFIIV IGVVILGLIIWKVKS hide sequence

RefSeq Acc Id:

ENSCAFP00000049771 ⟸ ENSCAFT00000073235

RefSeq Acc Id:

ENSCAFP00000000264 ⟸ ENSCAFT00000000293

RefSeq Acc Id:

ENSCAFP00000057836 ⟸ ENSCAFT00000086594

RefSeq Acc Id:

ENSCAFP00000056565 ⟸ ENSCAFT00000082407

RefSeq Acc Id:

ENSCAFP00000047795 ⟸ ENSCAFT00000080751

RefSeq Acc Id:

ENSCAFP00000046493 ⟸ ENSCAFT00000089751

RefSeq Acc Id:

ENSCAFP00000064384 ⟸ ENSCAFT00000075508

RefSeq Acc Id:	XP_038321345 ⟸ XM_038465417
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038321348 ⟸ XM_038465420
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038321347 ⟸ XM_038465419
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038321346 ⟸ XM_038465418
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038321349 ⟸ XM_038465421
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038321351 ⟸ XM_038465423
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038321352 ⟸ XM_038465424
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038446261 ⟸ XM_038590333
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038446262 ⟸ XM_038590334
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038510079 ⟸ XM_038654151
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MNL0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038510082 ⟸ XM_038654154
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0MNL0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038510081 ⟸ XM_038654153
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0SKB8 (UniProtKB/TrEMBL), A0A8I3RTN0 (UniProtKB/TrEMBL), A0A8C0MNL0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038510080 ⟸ XM_038654152
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0SKB8 (UniProtKB/TrEMBL), A0A8I3RTN0 (UniProtKB/TrEMBL), A0A8C0MNL0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038510083 ⟸ XM_038654155
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0MC62 (UniProtKB/TrEMBL), A0A8I3MNH2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038510084 ⟸ XM_038654156
- Peptide Label:	isoform X6
- UniProtKB:	A0A8C0L6L3 (UniProtKB/TrEMBL), A0A8C0YXM9 (UniProtKB/TrEMBL), A0A8I3MUA1 (UniProtKB/TrEMBL), A0A8C0MFT5 (UniProtKB/TrEMBL), A0A8I3MV58 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038510085 ⟸ XM_038654157
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038347091 ⟸ XM_038491163
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038381960 ⟸ XM_038526032
- Peptide Label:	isoform X8
- UniProtKB:	A0A8C0LC71 (UniProtKB/TrEMBL), A0A8C0MCE1 (UniProtKB/TrEMBL), A0A8I3MY30 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038381961 ⟸ XM_038526033
- Peptide Label:	isoform X6
- UniProtKB:	A0A8C0L6L3 (UniProtKB/TrEMBL), A0A8C0MFT5 (UniProtKB/TrEMBL), A0A8C0YXM9 (UniProtKB/TrEMBL), A0A8I3MUA1 (UniProtKB/TrEMBL), A0A8I3MV58 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845006535 ⟸ ENSCAFT00845008305

RefSeq Acc Id:

ENSCAFP00845006538 ⟸ ENSCAFT00845008309

RefSeq Acc Id:

ENSCAFP00845006545 ⟸ ENSCAFT00845008318

RefSeq Acc Id:

ENSCAFP00845006527 ⟸ ENSCAFT00845008296

RefSeq Acc Id:

ENSCAFP00845006519 ⟸ ENSCAFT00845008287

Protein Domains

t-SNARE coiled-coil homology

Promoters

RGD ID:

13681967

Promoter ID:

EPDNEW_C35

Type:

initiation region

Name:

STX7_1

Description:

syntaxin 7

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	25,606,666 - 25,606,726	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000000185	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030005919	UniProtKB/TrEMBL
	ENSCAFG00040013545	UniProtKB/TrEMBL
	ENSCAFG00845004632	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000000293.5	UniProtKB/TrEMBL
	ENSCAFT00000080751.2	UniProtKB/TrEMBL
	ENSCAFT00000086594.2	UniProtKB/TrEMBL
	ENSCAFT00030010848.1	UniProtKB/TrEMBL
	ENSCAFT00030010895.1	UniProtKB/TrEMBL
	ENSCAFT00030010962.1	UniProtKB/TrEMBL
	ENSCAFT00030011016.1	UniProtKB/TrEMBL
	ENSCAFT00040024991.1	UniProtKB/TrEMBL
	ENSCAFT00040025043.1	UniProtKB/TrEMBL
	ENSCAFT00040025149.1	UniProtKB/TrEMBL
	ENSCAFT00040025236.1	UniProtKB/TrEMBL
	ENSCAFT00845008287	ENTREZGENE
	ENSCAFT00845008287.1	UniProtKB/TrEMBL
	ENSCAFT00845008296	ENTREZGENE
	ENSCAFT00845008296.1	UniProtKB/TrEMBL
	ENSCAFT00845008305	ENTREZGENE
	ENSCAFT00845008305.1	UniProtKB/TrEMBL
	ENSCAFT00845008309.1	UniProtKB/TrEMBL
	ENSCAFT00845008318.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.110	UniProtKB/TrEMBL
	1.20.58.70	UniProtKB/TrEMBL
InterPro	SNARE	UniProtKB/TrEMBL
	Syntaxin	UniProtKB/TrEMBL
	Syntaxin/epimorphin_CS	UniProtKB/TrEMBL
	Syntaxin_N	UniProtKB/TrEMBL
	T_SNARE_dom	UniProtKB/TrEMBL
NCBI Gene	STX7	ENTREZGENE
PANTHER	PTHR19957	UniProtKB/TrEMBL
	SYNTAXIN-7	UniProtKB/TrEMBL
Pfam	SNARE	UniProtKB/TrEMBL
	Syntaxin_2	UniProtKB/TrEMBL
PROSITE	SYNTAXIN	UniProtKB/TrEMBL
	T_SNARE	UniProtKB/TrEMBL
SMART	SynN	UniProtKB/TrEMBL
	t_SNARE	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47661	UniProtKB/TrEMBL
UniProt	A0A8C0L6L3	ENTREZGENE
	A0A8C0LC71	ENTREZGENE
	A0A8C0MC62	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0MCE1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0MFT5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0MNL0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0SKB0_CANLF	UniProtKB/TrEMBL
	A0A8C0SKB8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0YXM9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MNH2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MUA1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MV58	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MY30	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3RTN0	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:46958	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-11-21	STX7	syntaxin 7	LOC106559538	uncharacterized LOC106559538	Data merged from RGD:12272405	737654	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar