Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Familial Prostate Cancer | | ISO | RFX7 (Homo sapiens) | 9068941 | CTD Direct Evidence: marker/mechanism | CTD | PMID:29892016 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Familial Prostate Cancer | | ISO | RFX7 (Homo sapiens) | 9068941 | CTD Direct Evidence: marker/mechanism | CTD | PMID:29892016 | |
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RFX7 (Canis lupus familiaris - dog) |
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RFX7 (Homo sapiens - human) |
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Rfx7 (Mus musculus - house mouse) |
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Rfx7 (Rattus norvegicus - Norway rat) |
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Rfx7 (Chinchilla lanigera - long-tailed chinchilla) |
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RFX7 (Pan paniscus - bonobo/pygmy chimpanzee) |
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Rfx7 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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RFX7 (Sus scrofa - pig) |
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RFX7 (Chlorocebus sabaeus - green monkey) |
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Rfx7 (Heterocephalus glaber - naked mole-rat) |
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Variants in RFX7
981 total Variants |
alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | reproductive system | respiratory system | adipose tissue | |
High | ||||||||||||
Medium | 2 | 2 | ||||||||||
Low | 5 | 5 | 20 | 6 | 6 | 6 | 6 | 6 | 10 | 8 | 10 | 6 |
Below cutoff |
RefSeq Transcripts | XM_003640056 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_022412529 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_022412530 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038442405 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038442406 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038442407 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038516859 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038516860 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038516862 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038580490 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038580491 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038580492 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038644793 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038644794 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038644795 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AAEX04000030 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
JAAHUQ010000310 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAAQRD010000075 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAAUVH010000365 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
REHQ01000030 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSCAFT00000025428 ⟹ ENSCAFP00000023611 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00000074610 ⟹ ENSCAFP00000053707 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00000083689 ⟹ ENSCAFP00000046996 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00845052084 ⟹ ENSCAFP00845040856 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00845052117 ⟹ ENSCAFP00845040878 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_003640056 ⟹ XP_003640104 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_022412529 ⟹ XP_022268237 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_022412530 ⟹ XP_022268238 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_038442405 ⟹ XP_038298333 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038442406 ⟹ XP_038298334 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038442407 ⟹ XP_038298335 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038516859 ⟹ XP_038372787 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038516860 ⟹ XP_038372788 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038516862 ⟹ XP_038372790 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038580490 ⟹ XP_038436418 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038580491 ⟹ XP_038436419 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038580492 ⟹ XP_038436420 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038644793 ⟹ XP_038500721 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038644794 ⟹ XP_038500722 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038644795 ⟹ XP_038500723 | ||||||||
Type: | CODING | ||||||||
Position: |
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Protein RefSeqs | XP_003640104 | (Get FASTA) | NCBI Sequence Viewer |
XP_022268237 | (Get FASTA) | NCBI Sequence Viewer | |
XP_022268238 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038298333 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038298334 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038298335 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038372787 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038372788 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038372790 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038436418 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038436419 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038436420 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038500721 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038500722 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038500723 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSCAFP00000023611.6 | ||
ENSCAFP00000046996.1 | |||
ENSCAFP00030022647.1 | |||
ENSCAFP00030022713.1 | |||
ENSCAFP00030022775.1 | |||
ENSCAFP00040041982.1 | |||
ENSCAFP00040041986.1 | |||
ENSCAFP00845040856 | |||
ENSCAFP00845040856.1 | |||
ENSCAFP00845040878.1 |
RefSeq Acc Id: | XP_003640104 ⟸ XM_003640056 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0TUU2 (UniProtKB/TrEMBL), A0A8I3Q035 (UniProtKB/TrEMBL), A0A8C0KHB0 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_022268237 ⟸ XM_022412529 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0TUU2 (UniProtKB/TrEMBL), A0A8I3Q035 (UniProtKB/TrEMBL), A0A8C0KHB0 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_022268238 ⟸ XM_022412530 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A0A8C0TTV3 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSCAFP00000053707 ⟸ ENSCAFT00000074610 |
RefSeq Acc Id: | ENSCAFP00000023611 ⟸ ENSCAFT00000025428 |
RefSeq Acc Id: | ENSCAFP00000046996 ⟸ ENSCAFT00000083689 |
RefSeq Acc Id: | XP_038372788 ⟸ XM_038516860 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038372787 ⟸ XM_038516859 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038372790 ⟸ XM_038516862 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_038500722 ⟸ XM_038644794 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038500721 ⟸ XM_038644793 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038500723 ⟸ XM_038644795 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_038298334 ⟸ XM_038442406 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0TUU2 (UniProtKB/TrEMBL), A0A8I3Q035 (UniProtKB/TrEMBL), A0A8C0KHB0 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038298333 ⟸ XM_038442405 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0TUU2 (UniProtKB/TrEMBL), A0A8I3Q035 (UniProtKB/TrEMBL), A0A8C0KHB0 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038298335 ⟸ XM_038442407 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A0A8C0TTV3 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038436419 ⟸ XM_038580491 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0KHB0 (UniProtKB/TrEMBL), A0A8C0TUU2 (UniProtKB/TrEMBL), A0A8I3Q035 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038436418 ⟸ XM_038580490 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0KHB0 (UniProtKB/TrEMBL), A0A8C0TUU2 (UniProtKB/TrEMBL), A0A8I3Q035 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038436420 ⟸ XM_038580492 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A0A8C0TTV3 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | ENSCAFP00845040878 ⟸ ENSCAFT00845052117 |
RefSeq Acc Id: | ENSCAFP00845040856 ⟸ ENSCAFT00845052084 |
Database | Acc Id | Source(s) |
Ensembl Genes | ENSCAFG00000016029 | Ensembl, UniProtKB/TrEMBL |
ENSCAFG00030014009 | UniProtKB/TrEMBL | |
ENSCAFG00040025746 | UniProtKB/TrEMBL | |
ENSCAFG00845029424 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL | |
Ensembl Transcript | ENSCAFT00000025428.6 | UniProtKB/TrEMBL |
ENSCAFT00000083689.2 | UniProtKB/TrEMBL | |
ENSCAFT00030025928.1 | UniProtKB/TrEMBL | |
ENSCAFT00030026010.1 | UniProtKB/TrEMBL | |
ENSCAFT00030026078.1 | UniProtKB/TrEMBL | |
ENSCAFT00040048078.1 | UniProtKB/TrEMBL | |
ENSCAFT00040048082.1 | UniProtKB/TrEMBL | |
ENSCAFT00845052084 | ENTREZGENE | |
ENSCAFT00845052084.1 | UniProtKB/TrEMBL | |
ENSCAFT00845052117.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 1.10.10.10 | UniProtKB/TrEMBL |
6.10.140.1290 | UniProtKB/TrEMBL | |
InterPro | DNA-bd_RFX | UniProtKB/TrEMBL |
RFX-like | UniProtKB/TrEMBL | |
RFX5_N | UniProtKB/TrEMBL | |
RFX5_N_sf | UniProtKB/TrEMBL | |
WH-like_DNA-bd_sf | UniProtKB/TrEMBL | |
WH_DNA-bd_sf | UniProtKB/TrEMBL | |
KEGG Report | cfa:100855421 | UniProtKB/TrEMBL |
NCBI Gene | RFX7 | ENTREZGENE |
PANTHER | DNA-BINDING PROTEIN RFX7 | UniProtKB/TrEMBL |
PTHR12619 | UniProtKB/TrEMBL | |
Pfam | RFX5_N | UniProtKB/TrEMBL |
RFX_DNA_binding | UniProtKB/TrEMBL | |
PROSITE | RFX_DBD | UniProtKB/TrEMBL |
Superfamily-SCOP | SSF46785 | UniProtKB/TrEMBL |
UniProt | A0A8C0KHB0 | ENTREZGENE |
A0A8C0RJY2_CANLF | UniProtKB/TrEMBL | |
A0A8C0TTV3 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8C0TUU2 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I3Q035 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I3Q6E9_CANLF | UniProtKB/TrEMBL | |
A0A8P0SKH1_CANLF | UniProtKB/TrEMBL | |
VGNC ID | VGNC:45509 | ENTREZGENE |