STARD4 (StAR related lipid transfer domain containing 4)

Gene: STARD4 (StAR related lipid transfer domain containing 4) Canis lupus familiaris

Analyze

Symbol:

STARD4

Name:

StAR related lipid transfer domain containing 4

RGD ID:

12315908

Description:

ENCODES a protein that exhibits cholesterol binding (inferred); cholesterol transfer activity (inferred); INVOLVED IN cholesterol import (inferred); cholesterol transport involved in cholesterol storage (inferred); intracellular cholesterol transport (inferred); ASSOCIATED WITH familial adenomatous polyposis 1 (ortholog); genetic disease (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasmic vesicle (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

stAR-related lipid transfer protein 4; START domain containing 4, sterol regulated

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	1,154,358 - 1,171,248 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	1,154,358 - 1,170,469 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	2,557,697 - 2,575,098 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	1,000,098 - 1,017,508 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	1,000,155 - 1,016,904 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	989,528 - 1,006,913 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	985,874 - 1,003,268 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	1,149,674 - 1,167,056 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

familial adenomatous polyposis 1 (ISO)

genetic disease (ISO)

Hereditary Neoplastic Syndromes (ISO)

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cholesterol import (IEA)

cholesterol transport involved in cholesterol storage (IEA)

intracellular cholesterol transport (IEA)

positive regulation of bile acid biosynthetic process (IEA)

positive regulation of cholesterol metabolic process (IEA)

Cellular Component

cytoplasm (IEA)

cytoplasmic vesicle (IEA,ISO)

cytosol (IEA)

endoplasmic reticulum (IEA)

Molecular Function

cholesterol binding (IEA)

cholesterol transfer activity (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

STARD4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	1,154,358 - 1,171,248 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	1,154,358 - 1,170,469 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	2,557,697 - 2,575,098 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	1,000,098 - 1,017,508 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	1,000,155 - 1,016,904 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	989,528 - 1,006,913 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	985,874 - 1,003,268 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	1,149,674 - 1,167,056 (+)	NCBI		UU_Cfam_GSD_1.0

STARD4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	111,496,033 - 111,512,535 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	111,496,033 - 111,512,590 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	110,831,731 - 110,848,233 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	110,861,921 - 110,876,056 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	110,861,920 - 110,876,056	NCBI
Celera	5	106,779,623 - 106,793,758 (-)	NCBI		Celera
Cytogenetic Map	5	q22.1	NCBI
HuRef	5	106,012,693 - 106,026,827 (-)	NCBI		HuRef
CHM1_1	5	110,267,316 - 110,281,451 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	112,006,333 - 112,022,835 (-)	NCBI		T2T-CHM13v2.0

Stard4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	33,332,191 - 33,346,937 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	33,332,408 - 33,346,915 (-)	Ensembl		GRCm39 Ensembl
GRCm38	18	33,199,138 - 33,213,862 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	33,199,355 - 33,213,862 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	33,361,075 - 33,373,470 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	33,326,232 - 33,338,627 (-)	NCBI		MGSCv36	mm8
Celera	18	33,649,468 - 33,662,093 (-)	NCBI		Celera
Cytogenetic Map	18	B1	NCBI
cM Map	18	18.18	NCBI

Stard4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	25,088,831 - 25,104,172 (-)	NCBI		GRCr8
mRatBN7.2	18	24,814,683 - 24,830,024 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	24,817,107 - 24,830,024 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	24,944,469 - 24,957,390 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	25,708,747 - 25,721,723 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	25,040,134 - 25,053,055 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	25,982,210 - 25,997,555 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	25,984,638 - 25,997,555 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	25,699,344 - 25,712,261 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	25,638,433 - 25,653,958 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	25,669,531 - 25,740,871 (-)	NCBI
Celera	18	24,564,822 - 24,577,739 (-)	NCBI		Celera
Cytogenetic Map	18	p12	NCBI

Stard4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955418	3,638,399 - 3,648,402 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955418	3,637,390 - 3,652,054 (+)	NCBI	ChiLan1.0	ChiLan1.0

STARD4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	106,758,190 - 106,774,231 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	104,912,071 - 104,927,995 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	106,855,990 - 106,873,384 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	112,658,743 - 112,675,165 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	112,657,516 - 112,675,165 (-)	Ensembl	panpan1.1		panPan2

Stard4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	155,733,930 - 155,752,046 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936531	5,866,021 - 5,877,597 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936531	5,865,840 - 5,877,591 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STARD4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	116,236,255 - 116,257,041 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	116,235,821 - 116,257,143 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	120,830,521 - 120,845,745 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

STARD4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	14,842,152 - 14,854,675 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	14,842,286 - 14,854,702 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666034	63,619,410 - 63,636,606 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Stard4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624743	29,282,558 - 29,293,854 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624743	29,278,327 - 29,298,050 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in STARD4
131 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium			9	2		2			8		6
Low	5	5	13	4	6	4	6	6	4	8	4	6
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014112008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014112016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022416508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038468080	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038471211	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038471212	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038471213	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038471214	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038471215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038532145	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038532146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038532147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038532148	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038532149	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038596402	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038596403	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038596404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038596405	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038596406	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038660631	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038660632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038660633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038660634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038660635	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_536287	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000074	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000045510 ⟹ ENSCAFP00000035847

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	3	1,161,393 - 1,170,469 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000064108 ⟹ ENSCAFP00000043531

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	3	1,154,358 - 1,169,077 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000071458 ⟹ ENSCAFP00000063014

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	3	1,154,358 - 1,167,452 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000091411 ⟹ ENSCAFP00000061756

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	3	1,154,358 - 1,169,115 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845006774 ⟹ ENSCAFP00845005387

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	3	1,000,155 - 1,016,904 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845006783 ⟹ ENSCAFP00845005395

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	3	1,000,155 - 1,016,232 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845006793 ⟹ ENSCAFP00845005404

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	3	1,000,155 - 1,014,880 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845006802 ⟹ ENSCAFP00845005413

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	3	1,000,155 - 1,013,214 (+)	Ensembl

RefSeq Acc Id:

XM_014112008 ⟹ XP_013967483

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	3	1,154,358 - 1,171,144 (+)	NCBI
Dog10K_Boxer_Tasha	3	2,557,697 - 2,575,098 (+)	NCBI

Sequence:

show sequence

AGTGGGCGGGGCGTCCGGGAGCCCACAGCGTCAGGGTCGCCGACCGCCGGGAGGCCGCCGCGTT
CCCTCCCCGCCGCGTCTCAGCTTGTGGGCGACTTCGGCGCTTGACAGAAAATAGACTTGTAGAC
CCTGAGGCGGAGGCCCGGCTGGGGGCCCGGCTGGCTCCACCTCGTACCCGCAGCGAGACCCGGG
ACAAGTGACTGGATTTCTCTGCTGGCTCTTTCTCCGCAAAATAAGGATAATAGGATCAGCTTTG
AAGGTCGTTTGCGGGGGTTAGAGGGAAGAACACAACCCAAAGCGGCCAGAAAGACTGATCACAT
AAAAGATGTAACAATTTGGAGAAAACCTTCAGAAGAATTTAATGGATACCTGTTCAAAGCCCAG
GGTGTTATAGATGACATTGTCAATAGTGTCATAGACCATATACGCCCAGGTCCCTATCGCTTGG
ATTGGGACAGCTTAATGACTTCAATGGATATTCTGGAACACTTTGAAGAGAATTGCTGTGTGAT
GCGCTACACTACGGCTGGTCAGCTTTGGAATATAATTTCCCCTCGAGAGTTTGTGGATTTCTCC
TACACCGTGGACTACGAAGACGGGCTTTTGTCCTGTGGGCTAAGTGTTGACTGGAGTGAACAGA
GACCAGAGTTTATTCGTGGGTTTAACCATCCCTGTGGCTGGTTCTGCGTTCCACGTAAAGACAA
TCCACAGCAGAGTCTCTTGACGGGCTATATTCAGACGGATCTGCGTGGGATGATCCCGCAGTCT
GCGGTCGATACAGCCATGGCAAGCACTTTAATCAGCTTCTATGTGGATTTACGAAAAGCCCTAC
AGAAGGCCTAAGATGTCTAAACTCGTAGGACAGCCGTTCCCCCAAATCAACTTTTTCCCTCAGT
GGCGTGGCCTGTGAAAATCATCCTTTTCTCTCTTCTGTGTAGCTGTAGAAACATGAGATGATTT
GTCAGTTTATCTTATTCCTTAGTTATCTAAGAGAAGGCATCTCCGTTTCCTTAGACAGTTGTTT
GCGCACTGTTTGGTACAGCGGCGCATCTTGTTTGACCGAAACTCTTACGAAACTGAACATTGCC
TCGATGTGAATATGAAAGCACAAGCTTCATACTGGTAAAGTCATCTGTTTTAGAGCTTTACGAA
CCTTTAAAAGTTTTAACTATTCTAGGAAATTAAATATCAGTGCTTTACTTTTGGTACGCTCTAT
GAGTTGGCCAATATCTAAAGAGAAGAGTTCTTTATATTTTATAAAAGGTGAACTTGTCAGTTGA
CTTGTACTACTTCAAATATTGAAAAAATCAGAAATAGAAGAATAGAGATAGTATAGATATAATT
CAGACAGTTGTTTTGATACCTAGATAACATTATTTTCTGGATATCTTTTAAAAATGTATTTGTA
TCTTTCTGTCCATTTATTTTGGAAGTCTTCCAAAGTGTTTATGCACGGATGAGACCAAGAACTG
CCAAGTATGTGCTGGAGCCACCAACCCGATGGCTTGTGTAAAGGGCGTGGTGATGTCCTACATT
CACCAACAGCAAATCGTCCAGAAATCAAATTCAATGAGTGTTTTCATATTTCAGTTTTTTCTTT
TTTTAAGACAAGCCCTCGAGAAATAGCTTTTAATTCTGAGAAGTATCCAATATTCTGTAGGAAA
ATAATCAGATTTTTAGTCTTTCTCATTTCATCCATGTTCACATTTCAAAGTATCGCTCCCCTCA
AAGTGTTACTGACTGCATCATACACGTTCACGAGTGTGAACGTGACTCAGTCTGGAACTTTTTT
TTTTTTTATTTTTATTTATTTATGATAGTCACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGGC
AGAGACATAGGCAGAGGGAGAAGCAGGCTCCATGCAGCAGGAGCCCGACATGGGATTCGATCCT
GGGTCTCCAGGATCGCGCCCTGGGCCAAAGGCAGGCGCTAAACCGCTGCGCCACCCAGGGATCC
CAGTCTGGAAGTTTAGTACATGCGTTCATACATTTGTCCACTTGCCTAGATGAGTCATTTTATA
AAACTGGCTTGGACTGTAATAGACCCCGTGACTCCATGGCTGCCTTAAATGAACATTCCCAAAT
GATCTGAACATTCCAAGTGATTCTGTTGCTTTTGAATAGCCACCTGGTTGACTTCCAAAACGAG
ACCTTGAGACAACTCGCTGTATCCTTGCGGGTGTATTTATGCTTGTATTCAGGCCTATATCTTG
AAATCTGTCTCCTGTTCAGTGGGAGTTACGTGGTACTTACTGTTTCTAAATGTTTTGTTTCTTT
TTTTTAAATTAATCTGAGGTTTCTTCTATTCCAGCATACTGTCTAGGATGGTGAAATGCTAGCA
GACGTCCAATTATGGGGCCCAGACTGGGTGAGGGATTTGTGACAAGATGGCCTGAGCTGGGTAC
CCCTAACATGAATAAACTGTCTAATGTGCTGTTTGTGTTTCTCAGCTTATACCAATCACCTCCA
ATTAGTGATTACATAATCCACTGTTGCACTGGGTCCCTTGCACATAAAAGGAAAAATTTTTGTT
GCAATATTGAGTCCTAGGATAGACTGAAAAATAGTATTTGAATTACCTGAAATTTCTATGCAGC
TTCTAGATGGCACTTGAGATTTGCTGGGCTCTAGATGCTACTTTTTTCTTTTCTTTTTTAAACA
GCTTTATAGAGGTATAATTTATATGCTGCACGACTTACTGGTTCTAAGAATACAGTCCAGTTAC
ATCTCGCATGCACTTAGAGTTGTGCGGTCATCACCACAATCCAGCTTTAGAATATTTCTAGCAA
CCAAACGACCCCTTTGCCTGTCTGCAGACTCAGATCTAACCAAAGTTGAGCGCAGTTGCCCTTA
TACAGAAGATGAAAAAGATTAGCGTAGGCTTTATCTGGTTTTGTTAGAGGAGAGGTGTGTTTGA
TCCTAAGCTCAGGCACCTTATGGTAATGTATTAAATGTTATCTCAAACACTGTAATTATACAAA
AATTTAATGATCTGGGTTGGGATTAATGATAACATGTAATTGAGTCTGCTGTTTCTGTAGCAGT
GCTGGATAATAGAAAAATAACATGAGCCATAAATGTAATTTAAAATTTTCTATCTGCCACATTA
AAAAGATAAAAAGCA

hide sequence

RefSeq Acc Id:

XM_014112016 ⟹ XP_013967491

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	3	1,154,358 - 1,171,144 (+)	NCBI
Dog10K_Boxer_Tasha	3	2,557,697 - 2,575,098 (+)	NCBI

Sequence:

show sequence

AGTGGGCGGGGCGTCCGGGAGCCCACAGCGTCAGGGTCGCCGACCGCCGGGAGGCCGCCGCGTT
CCCTCCCCGCCGCGTCTCAGCTTGTGGGCGACTTCGGCGCTTGACAGAAAATAGACTTGTAGAC
CCTGAGGCGGAGGCCCGGCTGGGGGCCCGGCTGGCTCCACCTCGTACCCGCAGCGAGACCCGGG
ACAAGTGACTGGATTTCTCTGCTGGCTCTTTCTCCGCAAAATAAGGATAATAGGATCAGCTTTG
AAGGTCGTTTGCGGGGGTTAGAGGGAAGAACACAACCCAAAGCGGCCAGAAAGACTGATCACAT
AGTTCAAAGCCCAGGGTGTTATAGATGACATTGTCAATAGTGTCATAGACCATATACGCCCAGG
TCCCTATCGCTTGGATTGGGACAGCTTAATGACTTCAATGGATATTCTGGAACACTTTGAAGAG
AATTGCTGTGTGATGCGCTACACTACGGCTGGTCAGCTTTGGAATATAATTTCCCCTCGAGAGT
TTGTGGATTTCTCCTACACCGTGGACTACGAAGACGGGCTTTTGTCCTGTGGGCTAAGTGTTGA
CTGGAGTGAACAGAGACCAGAGTTTATTCGTGGGTTTAACCATCCCTGTGGCTGGTTCTGCGTT
CCACGTAAAGACAATCCACAGCAGAGTCTCTTGACGGGCTATATTCAGACGGATCTGCGTGGGA
TGATCCCGCAGTCTGCGGTCGATACAGCCATGGCAAGCACTTTAATCAGCTTCTATGTGGATTT
ACGAAAAGCCCTACAGAAGGCCTAAGATGTCTAAACTCGTAGGACAGCCGTTCCCCCAAATCAA
CTTTTTCCCTCAGTGGCGTGGCCTGTGAAAATCATCCTTTTCTCTCTTCTGTGTAGCTGTAGAA
ACATGAGATGATTTGTCAGTTTATCTTATTCCTTAGTTATCTAAGAGAAGGCATCTCCGTTTCC
TTAGACAGTTGTTTGCGCACTGTTTGGTACAGCGGCGCATCTTGTTTGACCGAAACTCTTACGA
AACTGAACATTGCCTCGATGTGAATATGAAAGCACAAGCTTCATACTGGTAAAGTCATCTGTTT
TAGAGCTTTACGAACCTTTAAAAGTTTTAACTATTCTAGGAAATTAAATATCAGTGCTTTACTT
TTGGTACGCTCTATGAGTTGGCCAATATCTAAAGAGAAGAGTTCTTTATATTTTATAAAAGGTG
AACTTGTCAGTTGACTTGTACTACTTCAAATATTGAAAAAATCAGAAATAGAAGAATAGAGATA
GTATAGATATAATTCAGACAGTTGTTTTGATACCTAGATAACATTATTTTCTGGATATCTTTTA
AAAATGTATTTGTATCTTTCTGTCCATTTATTTTGGAAGTCTTCCAAAGTGTTTATGCACGGAT
GAGACCAAGAACTGCCAAGTATGTGCTGGAGCCACCAACCCGATGGCTTGTGTAAAGGGCGTGG
TGATGTCCTACATTCACCAACAGCAAATCGTCCAGAAATCAAATTCAATGAGTGTTTTCATATT
TCAGTTTTTTCTTTTTTTAAGACAAGCCCTCGAGAAATAGCTTTTAATTCTGAGAAGTATCCAA
TATTCTGTAGGAAAATAATCAGATTTTTAGTCTTTCTCATTTCATCCATGTTCACATTTCAAAG
TATCGCTCCCCTCAAAGTGTTACTGACTGCATCATACACGTTCACGAGTGTGAACGTGACTCAG
TCTGGAACTTTTTTTTTTTTTATTTTTATTTATTTATGATAGTCACACAGAGAGAGAGAGAGAG
AGAGAGAGAGAGGCAGAGACATAGGCAGAGGGAGAAGCAGGCTCCATGCAGCAGGAGCCCGACA
TGGGATTCGATCCTGGGTCTCCAGGATCGCGCCCTGGGCCAAAGGCAGGCGCTAAACCGCTGCG
CCACCCAGGGATCCCAGTCTGGAAGTTTAGTACATGCGTTCATACATTTGTCCACTTGCCTAGA
TGAGTCATTTTATAAAACTGGCTTGGACTGTAATAGACCCCGTGACTCCATGGCTGCCTTAAAT
GAACATTCCCAAATGATCTGAACATTCCAAGTGATTCTGTTGCTTTTGAATAGCCACCTGGTTG
ACTTCCAAAACGAGACCTTGAGACAACTCGCTGTATCCTTGCGGGTGTATTTATGCTTGTATTC
AGGCCTATATCTTGAAATCTGTCTCCTGTTCAGTGGGAGTTACGTGGTACTTACTGTTTCTAAA
TGTTTTGTTTCTTTTTTTTAAATTAATCTGAGGTTTCTTCTATTCCAGCATACTGTCTAGGATG
GTGAAATGCTAGCAGACGTCCAATTATGGGGCCCAGACTGGGTGAGGGATTTGTGACAAGATGG
CCTGAGCTGGGTACCCCTAACATGAATAAACTGTCTAATGTGCTGTTTGTGTTTCTCAGCTTAT
ACCAATCACCTCCAATTAGTGATTACATAATCCACTGTTGCACTGGGTCCCTTGCACATAAAAG
GAAAAATTTTTGTTGCAATATTGAGTCCTAGGATAGACTGAAAAATAGTATTTGAATTACCTGA
AATTTCTATGCAGCTTCTAGATGGCACTTGAGATTTGCTGGGCTCTAGATGCTACTTTTTTCTT
TTCTTTTTTAAACAGCTTTATAGAGGTATAATTTATATGCTGCACGACTTACTGGTTCTAAGAA
TACAGTCCAGTTACATCTCGCATGCACTTAGAGTTGTGCGGTCATCACCACAATCCAGCTTTAG
AATATTTCTAGCAACCAAACGACCCCTTTGCCTGTCTGCAGACTCAGATCTAACCAAAGTTGAG
CGCAGTTGCCCTTATACAGAAGATGAAAAAGATTAGCGTAGGCTTTATCTGGTTTTGTTAGAGG
AGAGGTGTGTTTGATCCTAAGCTCAGGCACCTTATGGTAATGTATTAAATGTTATCTCAAACAC
TGTAATTATACAAAAATTTAATGATCTGGGTTGGGATTAATGATAACATGTAATTGAGTCTGCT
GTTTCTGTAGCAGTGCTGGATAATAGAAAAATAACATGAGCCATAAATGTAATTTAAAATTTTC
TATCTGCCACATTAAAAAGATAAAAAGCA

hide sequence

RefSeq Acc Id:

XM_022416508 ⟹ XP_022272216

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	3	1,154,358 - 1,171,248 (+)	NCBI
Dog10K_Boxer_Tasha	3	2,557,697 - 2,575,098 (+)	NCBI

Sequence:

show sequence

AGTGGGCGGGGCGTCCGGGAGCCCACAGCGTCAGGGTCGCCGACCGCCGGGAGGCCGCCGCGTT
CCCTCCCCGCCGCGTCTCAGCTTGTGGGCGACTTCGGCGCTTGACAGAAAATAGACTTGTAGAC
CCTGAGGCGGAGGCCCGGCTGGGGGCCCGGCTGGCTCCACCTCGTACCCGCAGCGAGACCCGGG
ACAAGTGACTGGATTTCTCTGCTGGCTCTTTCTCCGCAAAATAAGGATAATAGGATCAGCTTTG
AAGGTCGTTTGCGGGGGTTAGAGGGAAGAACACAACCCAAAGCGGCCAGAAAGACTGATCACAT
AGAGAAAAAAATGGAAGGCCTGCCTGATGCTGCTGCTTTTGCAACTAGGCTTAAAAACACTCTC
ATCCAATATCATAGCATCGAAGATGATAAGTGGCGAGTTGCCAAGAAAGTGAAAGATGTAACAA
TTTGGAGAAAACCTTCAGAAGAATTTAATGGATACCTGTTCAAAGCCCAGGGTGTTATAGATGA
CATTGTCAATAGTGTCATAGACCATATACGCCCAGGTCCCTATCGCTTGGATTGGGACAGCTTA
ATGACTTCAATGGATATTCTGGAACACTTTGAAGAGAATTGCTGTGTGATGCGCTACACTACGG
CTGGTCAGCTTTGGAATATAATTTCCCCTCGAGAGTTTGTGGATTTCTCCTACACCGTGGACTA
CGAAGACGGGCTTTTGTCCTGTGGGCTAAGTGTTGACTGGAGTGAACAGAGACCAGAGTTTATT
CGTGGGTTTAACCATCCCTGTGGCTGGTTCTGCGTTCCACGTAAAGACAATCCACAGCAGAGTC
TCTTGACGGGCTATATTCAGACGGATCTGCGTGGGATGATCCCGCAGTCTGCGGTCGATACAGC
CATGCATACTGTCTAGGATGGTGAAATGCTAGCAGACGTCCAATTATGGGGCCCAGACTGGGTG
AGGGATTTGTGACAAGATGGCCTGAGCTGGGTACCCCTAACATGAATAAACTGTCTAATGTGCT
GTTTGTGTTTCTCAGCTTATACCAATCACCTCCAATTAGTGATTACATAATCCACTGTTGCACT
GGGTCCCTTGCACATAAAAGGAAAAATTTTTGTTGCAATATTGAGTCCTAGGATAGACTGAAAA
ATAGTATTTGAATTACCTGAAATTTCTATGCAGCTTCTAGATGGCACTTGAGATTTGCTGGGCT
CTAGATGCTACTTTTTTCTTTTCTTTTTTAAACAGCTTTATAGAGGTATAATTTATATGCTGCA
CGACTTACTGGTTCTAAGAATACAGTCCAGTTACATCTCGCATGCACTTAGAGTTGTGCGGTCA
TCACCACAATCCAGCTTTAGAATATTTCTAGCAACCAAACGACCCCTTTGCCTGTCTGCAGACT
CAGATCTAACCAAAGTTGAGCGCAGTTGCCCTTATACAGAAGATGAAAAAGATTAGCGTAGGCT
TTATCTGGTTTTGTTAGAGGAGAGGTGTGTTTGATCCTAAGCTCAGGCACCTTATGGTAATGTA
TTAAATGTTATCTCAAACACTGTAATTATACAAAAATTTAATGATCTGGGTTGGGATTAATGAT
AACATGTAATTGAGTCTGCTGTTTCTGTAGCAGTGCTGGATAATAGAAAAATAACATGAGCCAT
AAATGTAATTTAAAATTTTCTATCTGCCACATTAAAAAGATAAAAAGCAGCTGGTGTTAATGTT
AATGATACAGGTTTTAACTCAGTAATCCCAAATATTACCATTTAATCTTGTAATCAGTGTAAAA
ACTGATTAAGATGGCTTATACTCTC

hide sequence

RefSeq Acc Id:

XM_038468080 ⟹ XP_038324008

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	3	2,557,734 - 2,575,098 (+)	NCBI

RefSeq Acc Id:

XM_038471211 ⟹ XP_038327139

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	3	989,528 - 1,006,913 (+)	NCBI

RefSeq Acc Id:

XM_038471212 ⟹ XP_038327140

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	3	989,565 - 1,006,913 (+)	NCBI

RefSeq Acc Id:

XM_038471213 ⟹ XP_038327141

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	3	989,528 - 1,006,913 (+)	NCBI

RefSeq Acc Id:

XM_038471214 ⟹ XP_038327142

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	3	989,528 - 1,006,913 (+)	NCBI

RefSeq Acc Id:

XM_038471215 ⟹ XP_038327143

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	3	989,528 - 1,006,913 (+)	NCBI

RefSeq Acc Id:

XM_038532145 ⟹ XP_038388073

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	3	1,149,674 - 1,167,056 (+)	NCBI

RefSeq Acc Id:

XM_038532146 ⟹ XP_038388074

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	3	1,149,711 - 1,167,056 (+)	NCBI

RefSeq Acc Id:

XM_038532147 ⟹ XP_038388075

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	3	1,149,674 - 1,167,056 (+)	NCBI

RefSeq Acc Id:

XM_038532148 ⟹ XP_038388076

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	3	1,149,674 - 1,167,056 (+)	NCBI

RefSeq Acc Id:

XM_038532149 ⟹ XP_038388077

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	3	1,149,674 - 1,167,056 (+)	NCBI

RefSeq Acc Id:

XM_038596402 ⟹ XP_038452330

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	3	985,874 - 1,003,268 (+)	NCBI

RefSeq Acc Id:

XM_038596403 ⟹ XP_038452331

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	3	985,911 - 1,003,268 (+)	NCBI

RefSeq Acc Id:

XM_038596404 ⟹ XP_038452332

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	3	985,874 - 1,003,268 (+)	NCBI

RefSeq Acc Id:

XM_038596405 ⟹ XP_038452333

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	3	985,874 - 1,003,268 (+)	NCBI

RefSeq Acc Id:

XM_038596406 ⟹ XP_038452334

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	3	985,874 - 1,003,268 (+)	NCBI

RefSeq Acc Id:

XM_038660631 ⟹ XP_038516559

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	3	1,000,098 - 1,017,508 (+)	NCBI

RefSeq Acc Id:

XM_038660632 ⟹ XP_038516560

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	3	1,000,138 - 1,017,508 (+)	NCBI

RefSeq Acc Id:

XM_038660633 ⟹ XP_038516561

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	3	1,000,098 - 1,017,508 (+)	NCBI

RefSeq Acc Id:

XM_038660634 ⟹ XP_038516562

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	3	1,000,098 - 1,017,508 (+)	NCBI

RefSeq Acc Id:

XM_038660635 ⟹ XP_038516563

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	3	1,000,098 - 1,017,508 (+)	NCBI

RefSeq Acc Id:

XM_536287 ⟹ XP_536287

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	3	1,154,358 - 1,171,144 (+)	NCBI
Dog10K_Boxer_Tasha	3	2,557,697 - 2,575,098 (+)	NCBI

Sequence:

show sequence

AGTGGGCGGGGCGTCCGGGAGCCCACAGCGTCAGGGTCGCCGACCGCCGGGAGGCCGCCGCGTT
CCCTCCCCGCCGCGTCTCAGCTTGTGGGCGACTTCGGCGCTTGACAGAAAATAGACTTGTAGAC
CCTGAGGCGGAGGCCCGGCTGGGGGCCCGGCTGGCTCCACCTCGTACCCGCAGCGAGACCCGGG
ACAAGTGACTGGATTTCTCTGCTGGCTCTTTCTCCGCAAAATAAGGATAATAGGATCAGCTTTG
AAGGTCGTTTGCGGGGGTTAGAGGGAAGAACACAACCCAAAGCGGCCAGAAAGACTGATCACAT
AGAGAAAAAAATGGAAGGCCTGCCTGATGCTGCTGCTTTTGCAACTAGGCTTAAAAACACTCTC
ATCCAATATCATAGCATCGAAGATGATAAGTGGCGAGTTGCCAAGAAAGTGAAAGATGTAACAA
TTTGGAGAAAACCTTCAGAAGAATTTAATGGATACCTGTTCAAAGCCCAGGGTGTTATAGATGA
CATTGTCAATAGTGTCATAGACCATATACGCCCAGGTCCCTATCGCTTGGATTGGGACAGCTTA
ATGACTTCAATGGATATTCTGGAACACTTTGAAGAGAATTGCTGTGTGATGCGCTACACTACGG
CTGGTCAGCTTTGGAATATAATTTCCCCTCGAGAGTTTGTGGATTTCTCCTACACCGTGGACTA
CGAAGACGGGCTTTTGTCCTGTGGGCTAAGTGTTGACTGGAGTGAACAGAGACCAGAGTTTATT
CGTGGGTTTAACCATCCCTGTGGCTGGTTCTGCGTTCCACGTAAAGACAATCCACAGCAGAGTC
TCTTGACGGGCTATATTCAGACGGATCTGCGTGGGATGATCCCGCAGTCTGCGGTCGATACAGC
CATGGCAAGCACTTTAATCAGCTTCTATGTGGATTTACGAAAAGCCCTACAGAAGGCCTAAGAT
GTCTAAACTCGTAGGACAGCCGTTCCCCCAAATCAACTTTTTCCCTCAGTGGCGTGGCCTGTGA
AAATCATCCTTTTCTCTCTTCTGTGTAGCTGTAGAAACATGAGATGATTTGTCAGTTTATCTTA
TTCCTTAGTTATCTAAGAGAAGGCATCTCCGTTTCCTTAGACAGTTGTTTGCGCACTGTTTGGT
ACAGCGGCGCATCTTGTTTGACCGAAACTCTTACGAAACTGAACATTGCCTCGATGTGAATATG
AAAGCACAAGCTTCATACTGGTAAAGTCATCTGTTTTAGAGCTTTACGAACCTTTAAAAGTTTT
AACTATTCTAGGAAATTAAATATCAGTGCTTTACTTTTGGTACGCTCTATGAGTTGGCCAATAT
CTAAAGAGAAGAGTTCTTTATATTTTATAAAAGGTGAACTTGTCAGTTGACTTGTACTACTTCA
AATATTGAAAAAATCAGAAATAGAAGAATAGAGATAGTATAGATATAATTCAGACAGTTGTTTT
GATACCTAGATAACATTATTTTCTGGATATCTTTTAAAAATGTATTTGTATCTTTCTGTCCATT
TATTTTGGAAGTCTTCCAAAGTGTTTATGCACGGATGAGACCAAGAACTGCCAAGTATGTGCTG
GAGCCACCAACCCGATGGCTTGTGTAAAGGGCGTGGTGATGTCCTACATTCACCAACAGCAAAT
CGTCCAGAAATCAAATTCAATGAGTGTTTTCATATTTCAGTTTTTTCTTTTTTTAAGACAAGCC
CTCGAGAAATAGCTTTTAATTCTGAGAAGTATCCAATATTCTGTAGGAAAATAATCAGATTTTT
AGTCTTTCTCATTTCATCCATGTTCACATTTCAAAGTATCGCTCCCCTCAAAGTGTTACTGACT
GCATCATACACGTTCACGAGTGTGAACGTGACTCAGTCTGGAACTTTTTTTTTTTTTATTTTTA
TTTATTTATGATAGTCACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCAGAGACATAGGCAG
AGGGAGAAGCAGGCTCCATGCAGCAGGAGCCCGACATGGGATTCGATCCTGGGTCTCCAGGATC
GCGCCCTGGGCCAAAGGCAGGCGCTAAACCGCTGCGCCACCCAGGGATCCCAGTCTGGAAGTTT
AGTACATGCGTTCATACATTTGTCCACTTGCCTAGATGAGTCATTTTATAAAACTGGCTTGGAC
TGTAATAGACCCCGTGACTCCATGGCTGCCTTAAATGAACATTCCCAAATGATCTGAACATTCC
AAGTGATTCTGTTGCTTTTGAATAGCCACCTGGTTGACTTCCAAAACGAGACCTTGAGACAACT
CGCTGTATCCTTGCGGGTGTATTTATGCTTGTATTCAGGCCTATATCTTGAAATCTGTCTCCTG
TTCAGTGGGAGTTACGTGGTACTTACTGTTTCTAAATGTTTTGTTTCTTTTTTTTAAATTAATC
TGAGGTTTCTTCTATTCCAGCATACTGTCTAGGATGGTGAAATGCTAGCAGACGTCCAATTATG
GGGCCCAGACTGGGTGAGGGATTTGTGACAAGATGGCCTGAGCTGGGTACCCCTAACATGAATA
AACTGTCTAATGTGCTGTTTGTGTTTCTCAGCTTATACCAATCACCTCCAATTAGTGATTACAT
AATCCACTGTTGCACTGGGTCCCTTGCACATAAAAGGAAAAATTTTTGTTGCAATATTGAGTCC
TAGGATAGACTGAAAAATAGTATTTGAATTACCTGAAATTTCTATGCAGCTTCTAGATGGCACT
TGAGATTTGCTGGGCTCTAGATGCTACTTTTTTCTTTTCTTTTTTAAACAGCTTTATAGAGGTA
TAATTTATATGCTGCACGACTTACTGGTTCTAAGAATACAGTCCAGTTACATCTCGCATGCACT
TAGAGTTGTGCGGTCATCACCACAATCCAGCTTTAGAATATTTCTAGCAACCAAACGACCCCTT
TGCCTGTCTGCAGACTCAGATCTAACCAAAGTTGAGCGCAGTTGCCCTTATACAGAAGATGAAA
AAGATTAGCGTAGGCTTTATCTGGTTTTGTTAGAGGAGAGGTGTGTTTGATCCTAAGCTCAGGC
ACCTTATGGTAATGTATTAAATGTTATCTCAAACACTGTAATTATACAAAAATTTAATGATCTG
GGTTGGGATTAATGATAACATGTAATTGAGTCTGCTGTTTCTGTAGCAGTGCTGGATAATAGAA
AAATAACATGAGCCATAAATGTAATTTAAAATTTTCTATCTGCCACATTAAAAAGATAAAAAGC
A

hide sequence

Protein Sequences


Protein RefSeqs	XP_013967483	(Get FASTA)	NCBI Sequence Viewer
	XP_013967491	(Get FASTA)	NCBI Sequence Viewer
	XP_022272216	(Get FASTA)	NCBI Sequence Viewer
	XP_038324008	(Get FASTA)	NCBI Sequence Viewer
	XP_038327139	(Get FASTA)	NCBI Sequence Viewer
	XP_038327140	(Get FASTA)	NCBI Sequence Viewer
	XP_038327141	(Get FASTA)	NCBI Sequence Viewer
	XP_038327142	(Get FASTA)	NCBI Sequence Viewer
	XP_038327143	(Get FASTA)	NCBI Sequence Viewer
	XP_038388073	(Get FASTA)	NCBI Sequence Viewer
	XP_038388074	(Get FASTA)	NCBI Sequence Viewer
	XP_038388075	(Get FASTA)	NCBI Sequence Viewer
	XP_038388076	(Get FASTA)	NCBI Sequence Viewer
	XP_038388077	(Get FASTA)	NCBI Sequence Viewer
	XP_038452330	(Get FASTA)	NCBI Sequence Viewer
	XP_038452331	(Get FASTA)	NCBI Sequence Viewer
	XP_038452332	(Get FASTA)	NCBI Sequence Viewer
	XP_038452333	(Get FASTA)	NCBI Sequence Viewer
	XP_038452334	(Get FASTA)	NCBI Sequence Viewer
	XP_038516559	(Get FASTA)	NCBI Sequence Viewer
	XP_038516560	(Get FASTA)	NCBI Sequence Viewer
	XP_038516561	(Get FASTA)	NCBI Sequence Viewer
	XP_038516562	(Get FASTA)	NCBI Sequence Viewer
	XP_038516563	(Get FASTA)	NCBI Sequence Viewer
	XP_536287	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000035847.2
	ENSCAFP00000061756.2
	ENSCAFP00000063014.1
	ENSCAFP00000069556.1
	ENSCAFP00000070360.1
	ENSCAFP00000073438.1
	ENSCAFP00000074243.1
	ENSCAFP00030022093.1
	ENSCAFP00040015269.1
	ENSCAFP00040015319.1
	ENSCAFP00040015357.1
	ENSCAFP00040015410.1
	ENSCAFP00845005387
	ENSCAFP00845005387.1
	ENSCAFP00845005395
	ENSCAFP00845005395.1
	ENSCAFP00845005404.1
	ENSCAFP00845005413.1

RefSeq Acc Id:	XP_536287 ⟸ XM_536287
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KNV4 (UniProtKB/TrEMBL), A0A8C0S3I7 (UniProtKB/TrEMBL), A0A8I3MN09 (UniProtKB/TrEMBL), A0A8C0YSZ2 (UniProtKB/TrEMBL), A0A8I3N6R9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEGLPDAAAFATRLKNTLIQYHSIEDDKWRVAKKVKDVTIWRKPSEEFNGYLFKAQGVIDDIVN SVIDHIRPGPYRLDWDSLMTSMDILEHFEENCCVMRYTTAGQLWNIISPREFVDFSYTVDYEDG LLSCGLSVDWSEQRPEFIRGFNHPCGWFCVPRKDNPQQSLLTGYIQTDLRGMIPQSAVDTAMAS TLISFYVDLRKALQKA hide sequence

RefSeq Acc Id:	XP_013967483 ⟸ XM_014112008
- Peptide Label:	isoform X3
- Sequence:	show sequence MTSMDILEHFEENCCVMRYTTAGQLWNIISPREFVDFSYTVDYEDGLLSCGLSVDWSEQRPEFI RGFNHPCGWFCVPRKDNPQQSLLTGYIQTDLRGMIPQSAVDTAMASTLISFYVDLRKALQKA hide sequence

RefSeq Acc Id:	XP_013967491 ⟸ XM_014112016
- Peptide Label:	isoform X3
- Sequence:	show sequence MTSMDILEHFEENCCVMRYTTAGQLWNIISPREFVDFSYTVDYEDGLLSCGLSVDWSEQRPEFI RGFNHPCGWFCVPRKDNPQQSLLTGYIQTDLRGMIPQSAVDTAMASTLISFYVDLRKALQKA hide sequence

RefSeq Acc Id:	XP_022272216 ⟸ XM_022416508
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0S3D7 (UniProtKB/TrEMBL), A0A8I3RRM7 (UniProtKB/TrEMBL), A0A8C0YSZ2 (UniProtKB/TrEMBL), A0A8I3N6R9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEGLPDAAAFATRLKNTLIQYHSIEDDKWRVAKKVKDVTIWRKPSEEFNGYLFKAQGVIDDIVN SVIDHIRPGPYRLDWDSLMTSMDILEHFEENCCVMRYTTAGQLWNIISPREFVDFSYTVDYEDG LLSCGLSVDWSEQRPEFIRGFNHPCGWFCVPRKDNPQQSLLTGYIQTDLRGMIPQSAVDTAMHT V hide sequence

RefSeq Acc Id:

ENSCAFP00000043531 ⟸ ENSCAFT00000064108

RefSeq Acc Id:

ENSCAFP00000035847 ⟸ ENSCAFT00000045510

RefSeq Acc Id:

ENSCAFP00000061756 ⟸ ENSCAFT00000091411

RefSeq Acc Id:

ENSCAFP00000063014 ⟸ ENSCAFT00000071458

RefSeq Acc Id:	XP_038327139 ⟸ XM_038471211
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038327141 ⟸ XM_038471213
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038327142 ⟸ XM_038471214
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038327143 ⟸ XM_038471215
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038327140 ⟸ XM_038471212
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038452330 ⟸ XM_038596402
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038452332 ⟸ XM_038596404
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038452333 ⟸ XM_038596405
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038452334 ⟸ XM_038596406
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038452331 ⟸ XM_038596403
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038516559 ⟸ XM_038660631
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KNV4 (UniProtKB/TrEMBL), A0A8C0S3I7 (UniProtKB/TrEMBL), A0A8I3MN09 (UniProtKB/TrEMBL), A0A8C0YSZ2 (UniProtKB/TrEMBL), A0A8I3N6R9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038516561 ⟸ XM_038660633
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0S3D7 (UniProtKB/TrEMBL), A0A8I3RRM7 (UniProtKB/TrEMBL), A0A8C0YSZ2 (UniProtKB/TrEMBL), A0A8I3N6R9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038516562 ⟸ XM_038660634
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038516563 ⟸ XM_038660635
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038516560 ⟸ XM_038660632
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KNV4 (UniProtKB/TrEMBL), A0A8C0S3I7 (UniProtKB/TrEMBL), A0A8I3MN09 (UniProtKB/TrEMBL), A0A8C0YSZ2 (UniProtKB/TrEMBL), A0A8I3N6R9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038324008 ⟸ XM_038468080
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KNV4 (UniProtKB/TrEMBL), A0A8C0S3I7 (UniProtKB/TrEMBL), A0A8I3MN09 (UniProtKB/TrEMBL), A0A8C0YSZ2 (UniProtKB/TrEMBL), A0A8I3N6R9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038388073 ⟸ XM_038532145
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KNV4 (UniProtKB/TrEMBL), A0A8C0S3I7 (UniProtKB/TrEMBL), A0A8C0YSZ2 (UniProtKB/TrEMBL), A0A8I3MN09 (UniProtKB/TrEMBL), A0A8I3N6R9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038388075 ⟸ XM_038532147
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0S3D7 (UniProtKB/TrEMBL), A0A8C0YSZ2 (UniProtKB/TrEMBL), A0A8I3N6R9 (UniProtKB/TrEMBL), A0A8I3RRM7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038388076 ⟸ XM_038532148
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038388077 ⟸ XM_038532149
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038388074 ⟸ XM_038532146
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KNV4 (UniProtKB/TrEMBL), A0A8C0S3I7 (UniProtKB/TrEMBL), A0A8C0YSZ2 (UniProtKB/TrEMBL), A0A8I3MN09 (UniProtKB/TrEMBL), A0A8I3N6R9 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845005404 ⟸ ENSCAFT00845006793

RefSeq Acc Id:

ENSCAFP00845005387 ⟸ ENSCAFT00845006774

RefSeq Acc Id:

ENSCAFP00845005395 ⟸ ENSCAFT00845006783

RefSeq Acc Id:

ENSCAFP00845005413 ⟸ ENSCAFT00845006802

Protein Domains

START

Promoters

RGD ID:

13682665

Promoter ID:

EPDNEW_C733

Type:

initiation region

Name:

STARD4_1

Description:

StAR related lipid transfer domain containing 4

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	3	1,154,384 - 1,154,444	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000030762	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030013554	UniProtKB/TrEMBL
	ENSCAFG00040009468	UniProtKB/TrEMBL
	ENSCAFG00845003796	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000045510.3	UniProtKB/TrEMBL
	ENSCAFT00000071458.2	UniProtKB/TrEMBL
	ENSCAFT00000091411.2	UniProtKB/TrEMBL
	ENSCAFT00000094508.1	UniProtKB/TrEMBL
	ENSCAFT00000094727.1	UniProtKB/TrEMBL
	ENSCAFT00000097394.1	UniProtKB/TrEMBL
	ENSCAFT00000103641.1	UniProtKB/TrEMBL
	ENSCAFT00030025298.1	UniProtKB/TrEMBL
	ENSCAFT00040017599.1	UniProtKB/TrEMBL
	ENSCAFT00040017649.1	UniProtKB/TrEMBL
	ENSCAFT00040017693.1	UniProtKB/TrEMBL
	ENSCAFT00040017757.1	UniProtKB/TrEMBL
	ENSCAFT00845006774	ENTREZGENE
	ENSCAFT00845006774.1	UniProtKB/TrEMBL
	ENSCAFT00845006783	ENTREZGENE
	ENSCAFT00845006783.1	UniProtKB/TrEMBL
	ENSCAFT00845006793.1	UniProtKB/TrEMBL
	ENSCAFT00845006802.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.530.20	UniProtKB/TrEMBL
InterPro	StarD4	UniProtKB/TrEMBL
	START-like_dom_sf	UniProtKB/TrEMBL
	START_lipid-bd_dom	UniProtKB/TrEMBL
NCBI Gene	STARD4	ENTREZGENE
PANTHER	PTHR47006	UniProtKB/TrEMBL
	STAR-RELATED LIPID TRANSFER PROTEIN 4	UniProtKB/TrEMBL
Pfam	START	UniProtKB/TrEMBL
PRINTS	PRICHEXTENSN	UniProtKB/TrEMBL
PROSITE	START	UniProtKB/TrEMBL
SMART	START	UniProtKB/TrEMBL
Superfamily-SCOP	Bet v1-like	UniProtKB/TrEMBL
UniProt	A0A8C0KNV4	ENTREZGENE
	A0A8C0N911_CANLF	UniProtKB/TrEMBL
	A0A8C0S3D7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0S3I7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0YSZ2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MN09	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MSJ4_CANLF	UniProtKB/TrEMBL
	A0A8I3N6R9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3RRM7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0PIW1_CANLF	UniProtKB/TrEMBL
	A0A8P0PK88_CANLF	UniProtKB/TrEMBL
	A0A8P0SQV7_CANLF	UniProtKB/TrEMBL
	A0A8P0TDK2_CANLF	UniProtKB/TrEMBL
	A0A8P0TSH9_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:46884	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar