Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | substance-related disorder | | ISO | CHD1L (Homo sapiens) | 9068941 | CTD Direct Evidence: marker/mechanism | CTD | PMID:20098672 | |
|
Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | substance-related disorder | | ISO | CHD1L (Homo sapiens) | 9068941 | CTD Direct Evidence: marker/mechanism | CTD | PMID:20098672 | |
|
|
|
|
|
|
|
CHD1L (Canis lupus familiaris - dog) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
CHD1L (Homo sapiens - human) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Chd1l (Mus musculus - house mouse) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Chd1l (Rattus norvegicus - Norway rat) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Chd1l (Chinchilla lanigera - long-tailed chinchilla) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
CHD1L (Pan paniscus - bonobo/pygmy chimpanzee) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Chd1l (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
CHD1L (Sus scrofa - pig) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
CHD1L (Chlorocebus sabaeus - green monkey) |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Chd1l (Heterocephalus glaber - naked mole-rat) |
|
.
Variants in CHD1L
985 total Variants |
alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | reproductive system | respiratory system | adipose tissue | |
High | ||||||||||||
Medium | 20 | 6 | 1 | 6 | 6 | 11 | 8 | 7 | 3 | |||
Low | 5 | 5 | 2 | 5 | 6 | 1 | 3 | 3 | ||||
Below cutoff |
RefSeq Transcripts | XM_014120696 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_022404907 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_022404908 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_022404909 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_022404910 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_022404911 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_022404912 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_022404913 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_022404914 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038422911 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038422912 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038422913 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038422914 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038453470 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038499398 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038499399 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038499400 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038499401 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038561972 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038561973 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038561974 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038561975 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038626057 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038626058 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038626059 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038626060 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AAEX04000017 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
JAAHUQ010000209 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAAQRD010000035 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAAUVH010000359 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
REHQ01000017 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSCAFT00000017488 ⟹ ENSCAFP00000016192 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENSCAFT00000087158 ⟹ ENSCAFP00000051154 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENSCAFT00845016519 ⟹ ENSCAFP00845012848 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENSCAFT00845016587 ⟹ ENSCAFP00845012902 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENSCAFT00845016659 ⟹ ENSCAFP00845012962 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENSCAFT00845016715 ⟹ ENSCAFP00845013006 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENSCAFT00845016812 ⟹ ENSCAFP00845013074 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENSCAFT00845016914 ⟹ ENSCAFP00845013166 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038422911 ⟹ XP_038278839 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038422912 ⟹ XP_038278840 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038422913 ⟹ XP_038278841 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038422914 ⟹ XP_038278842 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038453470 ⟹ XP_038309398 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038499398 ⟹ XP_038355326 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038499399 ⟹ XP_038355327 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038499400 ⟹ XP_038355328 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038499401 ⟹ XP_038355329 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038561972 ⟹ XP_038417900 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038561973 ⟹ XP_038417901 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038561974 ⟹ XP_038417902 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038561975 ⟹ XP_038417903 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038626057 ⟹ XP_038481985 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038626058 ⟹ XP_038481986 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038626059 ⟹ XP_038481987 | ||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | XM_038626060 ⟹ XP_038481988 | ||||||||
Type: | CODING | ||||||||
Position: |
|
Protein RefSeqs | XP_038278839 | (Get FASTA) | NCBI Sequence Viewer |
XP_038278840 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038278841 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038278842 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038309398 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038355326 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038355327 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038355328 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038355329 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038417900 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038417901 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038417902 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038417903 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038481985 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038481986 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038481987 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038481988 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSCAFP00030017685.1 | ||
ENSCAFP00040027254.1 | |||
ENSCAFP00040027424.1 | |||
ENSCAFP00845012848 | |||
ENSCAFP00845012848.1 | |||
ENSCAFP00845012902.1 | |||
ENSCAFP00845012962.1 | |||
ENSCAFP00845013006 | |||
ENSCAFP00845013006.1 | |||
ENSCAFP00845013074.1 | |||
ENSCAFP00845013166.1 |
RefSeq Acc Id: | ENSCAFP00000051154 ⟸ ENSCAFT00000087158 |
RefSeq Acc Id: | ENSCAFP00000016192 ⟸ ENSCAFT00000017488 |
RefSeq Acc Id: | XP_038355329 ⟸ XM_038499401 |
- Peptide Label: | isoform X4 |
RefSeq Acc Id: | XP_038355326 ⟸ XM_038499398 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038355328 ⟸ XM_038499400 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_038355327 ⟸ XM_038499399 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_038481988 ⟸ XM_038626060 |
- Peptide Label: | isoform X4 |
RefSeq Acc Id: | XP_038481987 ⟸ XM_038626059 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_038481986 ⟸ XM_038626058 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_038481985 ⟸ XM_038626057 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038278842 ⟸ XM_038422914 |
- Peptide Label: | isoform X4 |
- UniProtKB: | A0A8I3NBT1 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038278840 ⟸ XM_038422912 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A0A8C0L1V9 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038278839 ⟸ XM_038422911 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8I3N7P3 (UniProtKB/TrEMBL), A0A8C0L1V9 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038278841 ⟸ XM_038422913 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8C0L1V9 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038309398 ⟸ XM_038453470 |
- Peptide Label: | isoform X5 |
RefSeq Acc Id: | XP_038417903 ⟸ XM_038561975 |
- Peptide Label: | isoform X4 |
- UniProtKB: | A0A8I3NBT1 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038417900 ⟸ XM_038561972 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0L1V9 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038417902 ⟸ XM_038561974 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8C0L1V9 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038417901 ⟸ XM_038561973 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A0A8C0L1V9 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | ENSCAFP00845013074 ⟸ ENSCAFT00845016812 |
RefSeq Acc Id: | ENSCAFP00845013006 ⟸ ENSCAFT00845016715 |
RefSeq Acc Id: | ENSCAFP00845012962 ⟸ ENSCAFT00845016659 |
RefSeq Acc Id: | ENSCAFP00845013166 ⟸ ENSCAFT00845016914 |
RefSeq Acc Id: | ENSCAFP00845012848 ⟸ ENSCAFT00845016519 |
RefSeq Acc Id: | ENSCAFP00845012902 ⟸ ENSCAFT00845016587 |
RGD ID: | 13686358 | ||||||||
Promoter ID: | EPDNEW_C4425 | ||||||||
Type: | initiation region | ||||||||
Name: | CHD1L_1 | ||||||||
Description: | chromodomain helicase DNA binding protein 1 like | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
Database | Acc Id | Source(s) |
Ensembl Genes | ENSCAFG00000010944 | Ensembl |
ENSCAFG00030010474 | UniProtKB/TrEMBL | |
ENSCAFG00040016672 | UniProtKB/TrEMBL | |
ENSCAFG00845009101 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL | |
Ensembl Transcript | ENSCAFT00030020280.1 | UniProtKB/TrEMBL |
ENSCAFT00040031341.1 | UniProtKB/TrEMBL | |
ENSCAFT00040031530.1 | UniProtKB/TrEMBL | |
ENSCAFT00845016519 | ENTREZGENE | |
ENSCAFT00845016519.1 | UniProtKB/TrEMBL | |
ENSCAFT00845016587.1 | UniProtKB/TrEMBL | |
ENSCAFT00845016659.1 | UniProtKB/TrEMBL | |
ENSCAFT00845016715 | ENTREZGENE | |
ENSCAFT00845016715.1 | UniProtKB/TrEMBL | |
ENSCAFT00845016812.1 | UniProtKB/TrEMBL | |
ENSCAFT00845016914.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 3.40.220.10 | UniProtKB/TrEMBL |
3.40.50.10810 | UniProtKB/TrEMBL | |
3.40.50.300 | UniProtKB/TrEMBL | |
InterPro | ALC1 | UniProtKB/TrEMBL |
DNA/RNA_helicase_DEAH_CS | UniProtKB/TrEMBL | |
Helicase_ATP-bd | UniProtKB/TrEMBL | |
Helicase_C | UniProtKB/TrEMBL | |
Macro_dom | UniProtKB/TrEMBL | |
Macro_dom-like | UniProtKB/TrEMBL | |
P-loop_NTPase | UniProtKB/TrEMBL | |
SNF2-like_sf | UniProtKB/TrEMBL | |
SNF2_N | UniProtKB/TrEMBL | |
NCBI Gene | CHD1L | ENTREZGENE |
PANTHER | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKE | UniProtKB/TrEMBL |
PTHR47157 | UniProtKB/TrEMBL | |
Pfam | Helicase_C | UniProtKB/TrEMBL |
SNF2-rel_dom | UniProtKB/TrEMBL | |
PROSITE | DEAH_ATP_HELICASE | UniProtKB/TrEMBL |
HELICASE_ATP_BIND_1 | UniProtKB/TrEMBL | |
HELICASE_CTER | UniProtKB/TrEMBL | |
MACRO | UniProtKB/TrEMBL | |
SMART | DEXDc | UniProtKB/TrEMBL |
HELICc | UniProtKB/TrEMBL | |
Superfamily-SCOP | SSF52540 | UniProtKB/TrEMBL |
SSF52949 | UniProtKB/TrEMBL | |
UniProt | A0A8C0L1V9 | ENTREZGENE |
A0A8C0N195_CANLF | UniProtKB/TrEMBL | |
A0A8C0SZB6_CANLF | UniProtKB/TrEMBL | |
A0A8I3N7P3 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I3N7Y2_CANLF | UniProtKB/TrEMBL | |
A0A8I3NBT1 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I3NBW6_CANLF | UniProtKB/TrEMBL | |
A0A8I3NBW9_CANLF | UniProtKB/TrEMBL | |
A0A8I3NNP6_CANLF | UniProtKB/TrEMBL | |
VGNC ID | VGNC:49732 | ENTREZGENE |