TRIM10 (tripartite motif containing 10)

Gene: TRIM10 (tripartite motif containing 10) Canis lupus familiaris

Analyze

Symbol:

TRIM10

Name:

tripartite motif containing 10

RGD ID:

12314939

Description:

INVOLVED IN erythrocyte differentiation (ortholog); innate immune response (ortholog); negative regulation of viral entry into host cell (ortholog); ASSOCIATED WITH genetic disease (ortholog); irritant dermatitis (ortholog); megacolon (ortholog); FOUND IN cytoplasm (ortholog)

Type:

protein-coding

Previously known as:

tripartite motif-containing protein 10

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

NCBI Annotation Information:

Genome Annotation Status: not in current annotation release

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	35	26,349,624 - 26,357,002 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	35	26,350,125 - 26,356,592 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

irritant dermatitis (ISO)

megacolon (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

erythrocyte differentiation (ISO)

innate immune response (ISO)

negative regulation of viral entry into host cell (ISO)

Cellular Component

cytoplasm (ISO)

Molecular Function

protein binding (ISO)

References

Genomics

Comparative Map Data

TRIM10
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	35	26,349,624 - 26,357,002 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	35	26,350,125 - 26,356,592 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1

TRIM10
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	30,151,943 - 30,164,009 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	30,151,943 - 30,161,211 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	30,119,720 - 30,128,988 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	30,227,701 - 30,236,690 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	30,227,704 - 30,236,690	NCBI
Celera	6	31,717,991 - 31,726,978 (-)	NCBI		Celera
Cytogenetic Map	6	p22.1	NCBI
HuRef	6	29,917,897 - 29,926,885 (-)	NCBI		HuRef
CHM1_1	6	30,121,797 - 30,130,784 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	30,016,218 - 30,028,317 (-)	NCBI		T2T-CHM13v2.0

Trim10
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	37,180,388 - 37,188,725 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	37,180,466 - 37,188,725 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	36,869,496 - 36,877,833 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	36,869,574 - 36,877,833 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	37,006,519 - 37,014,778 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	36,477,645 - 36,485,873 (+)	NCBI		MGSCv36	mm8
Celera	17	40,288,815 - 40,297,080 (+)	NCBI		Celera
Cytogenetic Map	17	B1	NCBI
cM Map	17	19.16	NCBI

Trim10
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	1,694,771 - 1,703,724 (-)	NCBI		GRCr8
mRatBN7.2	20	1,689,554 - 1,698,948 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	1,689,562 - 1,698,252 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	1,742,890 - 1,751,637 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	1,746,384 - 1,755,137 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	1,686,933 - 1,695,661 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	2,182,945 - 2,191,640 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	2,182,941 - 2,191,640 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	4,219,702 - 4,228,396 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	1,781,869 - 1,790,921 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	1,781,952 - 1,790,843 (-)	NCBI
Celera	20	2,398,517 - 2,406,997 (-)	NCBI		Celera
Cytogenetic Map	20	p12	NCBI

Trim10
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955583	269,266 - 276,675 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955583	268,856 - 277,079 (-)	NCBI	ChiLan1.0	ChiLan1.0

TRIM10
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	44,745,137 - 44,765,147 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	40,708,125 - 40,728,151 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	29,929,516 - 29,938,355 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	30,599,782 - 30,608,158 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	30,601,812 - 30,608,082 (-)	Ensembl	panpan1.1		panPan2

Trim10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	32,701,050 - 32,709,593 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936723	883,009 - 890,310 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936723	882,960 - 890,740 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TRIM10
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	22,717,482 - 22,731,491 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	22,718,000 - 22,731,445 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	24,844,769 - 24,857,770 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TRIM10
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	42,345,957 - 42,355,537 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	42,346,657 - 42,353,512 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	29,803,220 - 29,810,831 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Variants

Variants in TRIM10
168 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	4		17	1	5	1	6		10	1	10	6
Low	1	5	5	5	1	5		5	2	7
Below cutoff								1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022414462	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022414463	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022414464	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022414465	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000019388 ⟹ ENSCAFP00000017985

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	35	26,350,558 - 26,356,592 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000086663 ⟹ ENSCAFP00000048156

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	35	26,350,125 - 26,356,592 (-)	Ensembl

RefSeq Acc Id:

XM_022414462 ⟹ XP_022270170

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	35	26,349,624 - 26,357,002 (-)	NCBI

Sequence:

show sequence

AGCCCTGGGTCTGCTGATACCTGCAATCTGCCCGCACAGCCGGCAGCTGCAGGGGGGCCAGGGT
GGCGGCTCTGCTCCCCAACCCACTGTCCCTCCCATCCAGAGGAAGGTCCATGTCCTCAACGGTG
CGCGGCTGAGATACTGCCCCGTCCTTCCCAATGCATGTCTGCGGACGGACGGATGGACAGGAAG
ACACACGCAGCCGCCCAGAGAGTAGCCACATCGTGTGGGTATGCTGTGGCCCCATCTCCCTCCC
AGACAGCGTGCACATGTTCCTGAGGGAGGAGGACAGAAGAACCCTGGTGTGCAAGCGTGAGTCC
CTGCCCCTCAGCCACGCACTGACGCTGGCCGTGAGGACCTCCCGGGCCAGGTGGTACCATGGCA
TCTGTGAGCAGCCTGGCCGACGAAGTCAGCTGCCCCATCTGCCAGGGCACGCTAAGGGAGCCAG
TAACCGTTGACTGCGGCCACAACTACTGCCGGGCCTGCCTCACCCGCTACTGTGAGATCCCGGG
CCCTGACCCCAACGAGCCCCTCCACTGCCCCCTATGCAAGGAGCCTTTCCGCCTGGGGGGCTTC
CGGCCCAACTGGCAGCTGGCCAGCGTGGTGGAGAATATTGAGCGCCTTACGCTGGTGTCCACGC
TGGGCTCAGACCAGGAGGACGTCTGCCAGGAGCATGGGGAGAAGATCTACTTCTTCTGTGAGGA
CGATGAGGCGCAGTTGTGTGTGGTGTGCCGGGAGGCCCAGGAGCACCAGGCCCACACCGTGCGC
TTCCTGGACGAGGCAGCAGGGCCCTACAGGGAGCAAATACAGAAGTGTCTTGAGTGTCTGAGAA
GAGAGAGAGAGGAGATTCAAAGAATCCAGTCGAGAGAAAACCAGCGGATACAAGTCCTCCTATG
CCAGGTGGCCACCAAAAGACAAAAAGTGATTTTCGAGTTTGCACATCTGAGTCAGTTCCTGGAG
GAGCAGCAGAGCGTCCTTTTAGCTGAGCTGGAGAAGCTGGATGGCGACATCCTGAAGCAACGGG
ATGTCTTTGACGCCCTGGTCAGTGAGGAGATCTGCCGGTTTAGCACCCTGGTGGCCGAGCTGGA
GGAGAAGCTGGGGAGGCCCGCCAGGGAGCTGCTGACGCAGGTGTGCAAGTCACTTCACTGCATG
GACCATGAAATAAAGGGCTTGGCCTCCATGATCCCGGACGCCTTGCCAACCCTACAATTCTGGG
ACTCCAGGACCCCATATGGGAACCCCAGGAGTGAAACCAGAAAGTGCCGAAAGCCAGAGGCTGT
GTCTCAGGAGCTGGGCCAGAGAATTCGGGACTTCCCCCAGCGGGTCCTGCCACTGCGCAGGGAG
GTGACGACGTTTCTGGAGAAACTCTGCTTCGAGCTGGACTATGAGCCAGCTCCCATTTCCCTAG
ACCCACAGACATCACACCCCAAGCTCCTCCTGTCTGAGGACCACCGACGGGCTCAGTTCTCCTA
CAAATGGCAGAACTCACCAGACAACAGCCAGCGTTTCGACCGGGCGACCTGCGTCCTGGCGCAC
GGCGGCTTCACAGAGGGGAGACACACATGGATGGTGATGGTGGACCTGGCCCACGGGGGCAGCT
GCACGGTGGGCGTGGTGCGAGAGGATGTGAAGCGCAAGGGGGAGCTGAAGCTGCGGCCTGAGGA
AGGCGTGTGGGCCGTGAGGCTGGCCTGGGGCTTTGTCTCTGCCCTGGGCTCCTTCCCCATGAGA
CTGGCCCTGCAGGAGCAGCCCCGCCAGGTGCGTGTGACCCTCGACTACGAGGTGGGCTGGGTGA
CCTTTGTCAACGCCGTCAGCCAGGAGCCCATCTATACCTTCACAACGTCCTTCACCCAAAAGGT
CTTTCCCTTCTTCGGGCTCTGGGGCCGAGGGTCCAGCTTCTCCCTGAGCCCCTGAGAAGGTGCA
GTCACCTGAGGCAGGTACTTGGCTCGGAGGAGGGCTACTCAGACTCACACCCCCTGTGCCACCT
GGGGGCAGGGACAGAAACAGAGCACACTCAGGACTTGACAAGGACCAGCTGGGGTGATCCCTGG
TCTGCCCACCAGGGCACGGCTGGGGGTCCAGGGATGCGGGCCTGCCAGCATCCTCACCACCATC
CCCAGTGGAGCAGGAGCAGCCACTAGATGAGCGTCCTGGGTTAGGAGCCAGAGGGCCAGCCTAT
GGCCCACCAACTGTGTGACCTTAGGCAAGGCACCTATCTTCATTATGTCTTCTTCCAGAAAAAT
GAGAGTTCACTCACTTGTACCTTCAAGAAACATTTATTGTGTGCGACCATGAGCCAAGCAGGAT
GGGAGCTCCTGGTGGTGTGAAAACGGAAAGGAAATGTGTTGGGTGTTGGGTGTCCAGAGGGAGT
CACGGACAGGGGCATAACAGGTGCTGGGCAGAGGTTGCCCTGGGGTCAGGGAGCTCAGCAGGAG
GGGCCCAGTATGGCAGGGTGGGGGGGTAGGGGGGTGGGAGGGGTGTTGTTCTGAGTAAGAGAGG
AGAGCCTTGAGTAAGGGCACAGAAGCCCCCGGCAAGCTATCATTGTCCTTGGAATGTGCACTGA
GGCCTGGACCCCACTTCCCCCTGCAAACTACCTGTCTGGGGTCGAGAAGGGGTGATAGGCAGGG
GAGAGGCTGCAGTGTTGCAGAGCCCGGTGGGGGTGGCAGGCTTGGTGACCCATCTGGGGGACGG
GCTGGAGGAGAGAAAGCACTAGGACGGTCGGAGGCCTTGGGGCCCTCCGGAGCCTTGGACAAGC
TCTCGTGCTGCTGCCTGGAATTCAGAGAGGATGCAGTCGCCCCAGGGTCGAATGTTAAATCCCG
TGTGCAATAAAACTATCATCAGCACACAG

hide sequence

RefSeq Acc Id:

XM_022414463 ⟹ XP_022270171

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	35	26,349,624 - 26,357,002 (-)	NCBI

Sequence:

show sequence

AGCCCTGGGTCTGCTGATACCTGCAATCTGCCCGCACAGCCGGCAGCTGCAGGGGGGCCAGGGT
GGCGGCTCTGCTCCCCAACCCACTGTCCCTCCCATCCAGAGGAAGGTCCATGTCCTCAACGGTG
CGCGGCTGAGATACTGCCCCGTCCTTCCCAATGCATGTCTGCGGACGGACGGATGGACAGGAAG
ACACACGCAGCCGCCCAGAGAGTAGCCACATCGTGTGGGTATGCTGTGGCCCCATCTCCCTCCC
AGACAGCGTGCACATGTTCCTGAGGGAGGAGGACAGAAGAACCCTGGTGTGCAAGCCCCTGCCC
CTCAGCCACGCACTGACGCTGGCCGTGAGGACCTCCCGGGCCAGGTGGTACCATGGCATCTGTG
AGCAGCCTGGCCGACGAAGTCAGCTGCCCCATCTGCCAGGGCACGCTAAGGGAGCCAGTAACCG
TTGACTGCGGCCACAACTACTGCCGGGCCTGCCTCACCCGCTACTGTGAGATCCCGGGCCCTGA
CCCCAACGAGCCCCTCCACTGCCCCCTATGCAAGGAGCCTTTCCGCCTGGGGGGCTTCCGGCCC
AACTGGCAGCTGGCCAGCGTGGTGGAGAATATTGAGCGCCTTACGCTGGTGTCCACGCTGGGCT
CAGACCAGGAGGACGTCTGCCAGGAGCATGGGGAGAAGATCTACTTCTTCTGTGAGGACGATGA
GGCGCAGTTGTGTGTGGTGTGCCGGGAGGCCCAGGAGCACCAGGCCCACACCGTGCGCTTCCTG
GACGAGGCAGCAGGGCCCTACAGGGAGCAAATACAGAAGTGTCTTGAGTGTCTGAGAAGAGAGA
GAGAGGAGATTCAAAGAATCCAGTCGAGAGAAAACCAGCGGATACAAGTCCTCCTATGCCAGGT
GGCCACCAAAAGACAAAAAGTGATTTTCGAGTTTGCACATCTGAGTCAGTTCCTGGAGGAGCAG
CAGAGCGTCCTTTTAGCTGAGCTGGAGAAGCTGGATGGCGACATCCTGAAGCAACGGGATGTCT
TTGACGCCCTGGTCAGTGAGGAGATCTGCCGGTTTAGCACCCTGGTGGCCGAGCTGGAGGAGAA
GCTGGGGAGGCCCGCCAGGGAGCTGCTGACGCAGGTGTGCAAGTCACTTCACTGCATGGACCAT
GAAATAAAGGGCTTGGCCTCCATGATCCCGGACGCCTTGCCAACCCTACAATTCTGGGACTCCA
GGACCCCATATGGGAACCCCAGGAGTGAAACCAGAAAGTGCCGAAAGCCAGAGGCTGTGTCTCA
GGAGCTGGGCCAGAGAATTCGGGACTTCCCCCAGCGGGTCCTGCCACTGCGCAGGGAGGTGACG
ACGTTTCTGGAGAAACTCTGCTTCGAGCTGGACTATGAGCCAGCTCCCATTTCCCTAGACCCAC
AGACATCACACCCCAAGCTCCTCCTGTCTGAGGACCACCGACGGGCTCAGTTCTCCTACAAATG
GCAGAACTCACCAGACAACAGCCAGCGTTTCGACCGGGCGACCTGCGTCCTGGCGCACGGCGGC
TTCACAGAGGGGAGACACACATGGATGGTGATGGTGGACCTGGCCCACGGGGGCAGCTGCACGG
TGGGCGTGGTGCGAGAGGATGTGAAGCGCAAGGGGGAGCTGAAGCTGCGGCCTGAGGAAGGCGT
GTGGGCCGTGAGGCTGGCCTGGGGCTTTGTCTCTGCCCTGGGCTCCTTCCCCATGAGACTGGCC
CTGCAGGAGCAGCCCCGCCAGGTGCGTGTGACCCTCGACTACGAGGTGGGCTGGGTGACCTTTG
TCAACGCCGTCAGCCAGGAGCCCATCTATACCTTCACAACGTCCTTCACCCAAAAGGTCTTTCC
CTTCTTCGGGCTCTGGGGCCGAGGGTCCAGCTTCTCCCTGAGCCCCTGAGAAGGTGCAGTCACC
TGAGGCAGGTACTTGGCTCGGAGGAGGGCTACTCAGACTCACACCCCCTGTGCCACCTGGGGGC
AGGGACAGAAACAGAGCACACTCAGGACTTGACAAGGACCAGCTGGGGTGATCCCTGGTCTGCC
CACCAGGGCACGGCTGGGGGTCCAGGGATGCGGGCCTGCCAGCATCCTCACCACCATCCCCAGT
GGAGCAGGAGCAGCCACTAGATGAGCGTCCTGGGTTAGGAGCCAGAGGGCCAGCCTATGGCCCA
CCAACTGTGTGACCTTAGGCAAGGCACCTATCTTCATTATGTCTTCTTCCAGAAAAATGAGAGT
TCACTCACTTGTACCTTCAAGAAACATTTATTGTGTGCGACCATGAGCCAAGCAGGATGGGAGC
TCCTGGTGGTGTGAAAACGGAAAGGAAATGTGTTGGGTGTTGGGTGTCCAGAGGGAGTCACGGA
CAGGGGCATAACAGGTGCTGGGCAGAGGTTGCCCTGGGGTCAGGGAGCTCAGCAGGAGGGGCCC
AGTATGGCAGGGTGGGGGGGTAGGGGGGTGGGAGGGGTGTTGTTCTGAGTAAGAGAGGAGAGCC
TTGAGTAAGGGCACAGAAGCCCCCGGCAAGCTATCATTGTCCTTGGAATGTGCACTGAGGCCTG
GACCCCACTTCCCCCTGCAAACTACCTGTCTGGGGTCGAGAAGGGGTGATAGGCAGGGGAGAGG
CTGCAGTGTTGCAGAGCCCGGTGGGGGTGGCAGGCTTGGTGACCCATCTGGGGGACGGGCTGGA
GGAGAGAAAGCACTAGGACGGTCGGAGGCCTTGGGGCCCTCCGGAGCCTTGGACAAGCTCTCGT
GCTGCTGCCTGGAATTCAGAGAGGATGCAGTCGCCCCAGGGTCGAATGTTAAATCCCGTGTGCA
ATAAAACTATCATCAGCACACAG

hide sequence

RefSeq Acc Id:

XM_022414464 ⟹ XP_022270172

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	35	26,349,624 - 26,357,002 (-)	NCBI

Sequence:

show sequence

AGCCCTGGGTCTGCTGATACCTGCAATCTGCCCGCACAGCCGGCAGCTGCAGGGGGGCCAGGGT
GGCGGCTCTGCTCCCCAACCCACTGTCCCTCCCATCCAGAGGAAGGTCCATGTCCTCAACGGTG
CGCGGCTGAGATACTGCCCCGTCCTTCCCAATGCATGTCTGCGGACGGACGGATGGACAGGAAG
ACACACGCAGCCGCCCAGAGAGTAGCCACATCGTGTGGCCCTGCCCCTCAGCCACGCACTGACG
CTGGCCGTGAGGACCTCCCGGGCCAGGTGGTACCATGGCATCTGTGAGCAGCCTGGCCGACGAA
GTCAGCTGCCCCATCTGCCAGGGCACGCTAAGGGAGCCAGTAACCGTTGACTGCGGCCACAACT
ACTGCCGGGCCTGCCTCACCCGCTACTGTGAGATCCCGGGCCCTGACCCCAACGAGCCCCTCCA
CTGCCCCCTATGCAAGGAGCCTTTCCGCCTGGGGGGCTTCCGGCCCAACTGGCAGCTGGCCAGC
GTGGTGGAGAATATTGAGCGCCTTACGCTGGTGTCCACGCTGGGCTCAGACCAGGAGGACGTCT
GCCAGGAGCATGGGGAGAAGATCTACTTCTTCTGTGAGGACGATGAGGCGCAGTTGTGTGTGGT
GTGCCGGGAGGCCCAGGAGCACCAGGCCCACACCGTGCGCTTCCTGGACGAGGCAGCAGGGCCC
TACAGGGAGCAAATACAGAAGTGTCTTGAGTGTCTGAGAAGAGAGAGAGAGGAGATTCAAAGAA
TCCAGTCGAGAGAAAACCAGCGGATACAAGTCCTCCTATGCCAGGTGGCCACCAAAAGACAAAA
AGTGATTTTCGAGTTTGCACATCTGAGTCAGTTCCTGGAGGAGCAGCAGAGCGTCCTTTTAGCT
GAGCTGGAGAAGCTGGATGGCGACATCCTGAAGCAACGGGATGTCTTTGACGCCCTGGTCAGTG
AGGAGATCTGCCGGTTTAGCACCCTGGTGGCCGAGCTGGAGGAGAAGCTGGGGAGGCCCGCCAG
GGAGCTGCTGACGCAGGTGTGCAAGTCACTTCACTGCATGGACCATGAAATAAAGGGCTTGGCC
TCCATGATCCCGGACGCCTTGCCAACCCTACAATTCTGGGACTCCAGGACCCCATATGGGAACC
CCAGGAGTGAAACCAGAAAGTGCCGAAAGCCAGAGGCTGTGTCTCAGGAGCTGGGCCAGAGAAT
TCGGGACTTCCCCCAGCGGGTCCTGCCACTGCGCAGGGAGGTGACGACGTTTCTGGAGAAACTC
TGCTTCGAGCTGGACTATGAGCCAGCTCCCATTTCCCTAGACCCACAGACATCACACCCCAAGC
TCCTCCTGTCTGAGGACCACCGACGGGCTCAGTTCTCCTACAAATGGCAGAACTCACCAGACAA
CAGCCAGCGTTTCGACCGGGCGACCTGCGTCCTGGCGCACGGCGGCTTCACAGAGGGGAGACAC
ACATGGATGGTGATGGTGGACCTGGCCCACGGGGGCAGCTGCACGGTGGGCGTGGTGCGAGAGG
ATGTGAAGCGCAAGGGGGAGCTGAAGCTGCGGCCTGAGGAAGGCGTGTGGGCCGTGAGGCTGGC
CTGGGGCTTTGTCTCTGCCCTGGGCTCCTTCCCCATGAGACTGGCCCTGCAGGAGCAGCCCCGC
CAGGTGCGTGTGACCCTCGACTACGAGGTGGGCTGGGTGACCTTTGTCAACGCCGTCAGCCAGG
AGCCCATCTATACCTTCACAACGTCCTTCACCCAAAAGGTCTTTCCCTTCTTCGGGCTCTGGGG
CCGAGGGTCCAGCTTCTCCCTGAGCCCCTGAGAAGGTGCAGTCACCTGAGGCAGGTACTTGGCT
CGGAGGAGGGCTACTCAGACTCACACCCCCTGTGCCACCTGGGGGCAGGGACAGAAACAGAGCA
CACTCAGGACTTGACAAGGACCAGCTGGGGTGATCCCTGGTCTGCCCACCAGGGCACGGCTGGG
GGTCCAGGGATGCGGGCCTGCCAGCATCCTCACCACCATCCCCAGTGGAGCAGGAGCAGCCACT
AGATGAGCGTCCTGGGTTAGGAGCCAGAGGGCCAGCCTATGGCCCACCAACTGTGTGACCTTAG
GCAAGGCACCTATCTTCATTATGTCTTCTTCCAGAAAAATGAGAGTTCACTCACTTGTACCTTC
AAGAAACATTTATTGTGTGCGACCATGAGCCAAGCAGGATGGGAGCTCCTGGTGGTGTGAAAAC
GGAAAGGAAATGTGTTGGGTGTTGGGTGTCCAGAGGGAGTCACGGACAGGGGCATAACAGGTGC
TGGGCAGAGGTTGCCCTGGGGTCAGGGAGCTCAGCAGGAGGGGCCCAGTATGGCAGGGTGGGGG
GGTAGGGGGGTGGGAGGGGTGTTGTTCTGAGTAAGAGAGGAGAGCCTTGAGTAAGGGCACAGAA
GCCCCCGGCAAGCTATCATTGTCCTTGGAATGTGCACTGAGGCCTGGACCCCACTTCCCCCTGC
AAACTACCTGTCTGGGGTCGAGAAGGGGTGATAGGCAGGGGAGAGGCTGCAGTGTTGCAGAGCC
CGGTGGGGGTGGCAGGCTTGGTGACCCATCTGGGGGACGGGCTGGAGGAGAGAAAGCACTAGGA
CGGTCGGAGGCCTTGGGGCCCTCCGGAGCCTTGGACAAGCTCTCGTGCTGCTGCCTGGAATTCA
GAGAGGATGCAGTCGCCCCAGGGTCGAATGTTAAATCCCGTGTGCAATAAAACTATCATCAGCA
CACAG

hide sequence

RefSeq Acc Id:

XM_022414465 ⟹ XP_022270173

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	35	26,349,624 - 26,357,002 (-)	NCBI

Sequence:

show sequence

AGCCCTGGGTCTGCTGATACCTGCAATCTGCCCGCACAGCCGGCAGCTGCAGGGGGGCCAGGGT
GGCGGCTCTGCTCCCCAACCCACTGTCCCTCCCATCCAGAGGAAGGTCCATGTCCTCAACGGTG
CGCGGCTGAGATACTGCCCCGTCCTTCCCAATGCATGTCTGCGGACGGACGGATGGACAGGAAG
ACACACGCAGCCGCCCAGAGAGTAGCCACATCGTGTGGGTATGCTGTGGCCCCATCTCCCTCCC
AGACAGCGTGCACATGTTCCTGAGGGAGGAGGACAGAAGAACCCTGGTGTGCAAGCGTGAGTCC
CTGCCCCTCAGCCACGCACTGACGCTGGCCGTGAGGACCTCCCGGGCCAGGTGGTACCATGGCA
TCTGTGAGCAGCCTGGCCGACGAAGTCAGCTGCCCCATCTGCCAGGGCACGCTAAGGGAGCCAG
TAACCGTTGACTGCGGCCACAACTACTGCCGGGCCTGCCTCACCCGCTACTGTGAGATCCCGGG
CCCTGACCCCAACGAGCCCCTCCACTGCCCCCTATGCAAGGAGCCTTTCCGCCTGGGGGGCTTC
CGGCCCAACTGGCAGCTGGCCAGCGTGGTGGAGAATATTGAGCGCCTTACGCTGGTGTCCACGC
TGGGCTCAGACCAGGAGGACGTCTGCCAGGAGCATGGGGAGAAGATCTACTTCTTCTGTGAGGA
CGATGAGGCGCAGTTGTGTGTGGTGTGCCGGGAGGCCCAGGAGCACCAGGCCCACACCGTGCGC
TTCCTGGACGAGGCAGCAGGGCCCTACAGGGAGCAAATACAGAAGTGTCTTGAGTGTCTGAGAA
GAGAGAGAGAGGAGATTCAAAGAATCCAGTCGAGAGAAAACCAGCGGATACAAGTCCTCCTATG
CCAGGTGGCCACCAAAAGACAAAAAGTGATTTTCGAGTTTGCACATCTGAGTCAGTTCCTGGAG
GAGCAGCAGAGCGTCCTTTTAGCTGAGCTGGAGAAGCTGGATGGCGACATCCTGAAGCAACGGG
ATGTCTTTGACGCCCTGGTCAGTGAGGAGATCTGCCGGTTTAGCACCCTGGTGGCCGAGCTGGA
GGAGAAGCTGGGGAGGCCCGCCAGGGAGCTGCTGACGGTGTGCAAGTCACTTCACTGCATGGAC
CATGAAATAAAGGGCTTGGCCTCCATGATCCCGGACGCCTTGCCAACCCTACAATTCTGGGACT
CCAGGACCCCATATGGGAACCCCAGGAGTGAAACCAGAAAGTGCCGAAAGCCAGAGGCTGTGTC
TCAGGAGCTGGGCCAGAGAATTCGGGACTTCCCCCAGCGGGTCCTGCCACTGCGCAGGGAGGTG
ACGACGTTTCTGGAGAAACTCTGCTTCGAGCTGGACTATGAGCCAGCTCCCATTTCCCTAGACC
CACAGACATCACACCCCAAGCTCCTCCTGTCTGAGGACCACCGACGGGCTCAGTTCTCCTACAA
ATGGCAGAACTCACCAGACAACAGCCAGCGTTTCGACCGGGCGACCTGCGTCCTGGCGCACGGC
GGCTTCACAGAGGGGAGACACACATGGATGGTGATGGTGGACCTGGCCCACGGGGGCAGCTGCA
CGGTGGGCGTGGTGCGAGAGGATGTGAAGCGCAAGGGGGAGCTGAAGCTGCGGCCTGAGGAAGG
CGTGTGGGCCGTGAGGCTGGCCTGGGGCTTTGTCTCTGCCCTGGGCTCCTTCCCCATGAGACTG
GCCCTGCAGGAGCAGCCCCGCCAGGTGCGTGTGACCCTCGACTACGAGGTGGGCTGGGTGACCT
TTGTCAACGCCGTCAGCCAGGAGCCCATCTATACCTTCACAACGTCCTTCACCCAAAAGGTCTT
TCCCTTCTTCGGGCTCTGGGGCCGAGGGTCCAGCTTCTCCCTGAGCCCCTGAGAAGGTGCAGTC
ACCTGAGGCAGGTACTTGGCTCGGAGGAGGGCTACTCAGACTCACACCCCCTGTGCCACCTGGG
GGCAGGGACAGAAACAGAGCACACTCAGGACTTGACAAGGACCAGCTGGGGTGATCCCTGGTCT
GCCCACCAGGGCACGGCTGGGGGTCCAGGGATGCGGGCCTGCCAGCATCCTCACCACCATCCCC
AGTGGAGCAGGAGCAGCCACTAGATGAGCGTCCTGGGTTAGGAGCCAGAGGGCCAGCCTATGGC
CCACCAACTGTGTGACCTTAGGCAAGGCACCTATCTTCATTATGTCTTCTTCCAGAAAAATGAG
AGTTCACTCACTTGTACCTTCAAGAAACATTTATTGTGTGCGACCATGAGCCAAGCAGGATGGG
AGCTCCTGGTGGTGTGAAAACGGAAAGGAAATGTGTTGGGTGTTGGGTGTCCAGAGGGAGTCAC
GGACAGGGGCATAACAGGTGCTGGGCAGAGGTTGCCCTGGGGTCAGGGAGCTCAGCAGGAGGGG
CCCAGTATGGCAGGGTGGGGGGGTAGGGGGGTGGGAGGGGTGTTGTTCTGAGTAAGAGAGGAGA
GCCTTGAGTAAGGGCACAGAAGCCCCCGGCAAGCTATCATTGTCCTTGGAATGTGCACTGAGGC
CTGGACCCCACTTCCCCCTGCAAACTACCTGTCTGGGGTCGAGAAGGGGTGATAGGCAGGGGAG
AGGCTGCAGTGTTGCAGAGCCCGGTGGGGGTGGCAGGCTTGGTGACCCATCTGGGGGACGGGCT
GGAGGAGAGAAAGCACTAGGACGGTCGGAGGCCTTGGGGCCCTCCGGAGCCTTGGACAAGCTCT
CGTGCTGCTGCCTGGAATTCAGAGAGGATGCAGTCGCCCCAGGGTCGAATGTTAAATCCCGTGT
GCAATAAAACTATCATCAGCACACAG

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Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000012200	Ensembl
NCBI Gene	TRIM10	ENTREZGENE
VGNC ID	VGNC:49639	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD