FCHSD1 (FCH and double SH3 domains 1)

Gene: FCHSD1 (FCH and double SH3 domains 1) Canis lupus familiaris

Analyze

Symbol:

FCHSD1

Name:

FCH and double SH3 domains 1

RGD ID:

12303332

Description:

ENCODES a protein that exhibits lipid binding (inferred); INVOLVED IN membrane organization (inferred); neuromuscular synaptic transmission (inferred); positive regulation of actin filament polymerization (inferred); ASSOCIATED WITH familial adenomatous polyposis 1 (ortholog); genetic disease (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN cuticular plate (inferred); neuromuscular junction (inferred); recycling endosome (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

F-BAR and double SH3 domains protein 1; FCH and double SH3 domains protein 1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	36,601,969 - 36,612,262 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	36,602,460 - 36,612,199 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	33,653,988 - 33,664,163 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	37,056,295 - 37,066,469 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	37,054,524 - 37,066,405 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	34,130,792 - 34,141,033 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	34,942,324 - 34,952,545 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	35,749,609 - 35,759,851 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

familial adenomatous polyposis 1 (ISO)

genetic disease (ISO)

Hereditary Neoplastic Syndromes (ISO)

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

membrane organization (IEA)

neuromuscular synaptic transmission (IEA)

positive regulation of actin filament polymerization (IEA)

regulation of actin filament polymerization (IEA)

Cellular Component

cuticular plate (IEA)

neuromuscular junction (IEA)

recycling endosome (IEA)

Molecular Function

lipid binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

FCHSD1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	36,601,969 - 36,612,262 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	36,602,460 - 36,612,199 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	33,653,988 - 33,664,163 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	37,056,295 - 37,066,469 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	37,054,524 - 37,066,405 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	34,130,792 - 34,141,033 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	34,942,324 - 34,952,545 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	35,749,609 - 35,759,851 (-)	NCBI		UU_Cfam_GSD_1.0

FCHSD1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	141,639,302 - 141,651,418 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	141,639,302 - 141,651,418 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	141,018,869 - 141,030,985 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	140,999,053 - 141,011,170 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	140,999,052 - 141,011,170	NCBI
Celera	5	137,095,597 - 137,107,714 (-)	NCBI		Celera
Cytogenetic Map	5	q31.3	NCBI
HuRef	5	136,163,376 - 136,175,493 (-)	NCBI		HuRef
CHM1_1	5	140,452,150 - 140,464,275 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	142,165,308 - 142,177,433 (-)	NCBI		T2T-CHM13v2.0

Fchsd1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	38,090,484 - 38,102,828 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	38,090,484 - 38,102,827 (-)	Ensembl		GRCm39 Ensembl
GRCm38	18	37,957,431 - 37,969,814 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	37,957,431 - 37,969,774 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	18	38,117,088 - 38,129,385 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	18	38,083,408 - 38,095,705 (-)	NCBI		MGSCv36	mm8
Celera	18	39,300,818 - 39,313,113 (-)	NCBI		Celera
Cytogenetic Map	18	B3	NCBI
cM Map	18	19.84	NCBI

Fchsd1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	30,043,466 - 30,056,326 (-)	NCBI		GRCr8
mRatBN7.2	18	29,793,899 - 29,804,533 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	29,793,899 - 29,804,466 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	18	29,898,204 - 29,908,771 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	30,660,402 - 30,670,962 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	29,995,747 - 30,006,307 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	31,096,815 - 31,109,077 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	31,095,613 - 31,109,025 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	18	30,784,855 - 30,797,657 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	18	30,878,455 - 30,890,675 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	18	30,907,252 - 30,917,329 (-)	NCBI
Celera	18	29,436,850 - 29,449,069 (-)	NCBI		Celera
Cytogenetic Map	18	p11	NCBI

Fchsd1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955415	12,123,520 - 12,135,412 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955415	12,123,520 - 12,135,412 (+)	NCBI	ChiLan1.0	ChiLan1.0

FCHSD1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	136,889,807 - 136,902,229 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	135,027,678 - 135,039,930 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	137,000,158 - 137,012,379 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	143,114,440 - 143,125,017 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

Fchsd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	150,942,207 - 150,953,140 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936504	12,516,226 - 12,526,306 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936504	12,516,226 - 12,526,306 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FCHSD1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	143,289,859 - 143,301,900 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	143,289,854 - 143,301,921 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	149,494,223 - 149,504,542 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FCHSD1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	44,267,276 - 44,277,754 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	44,267,798 - 44,277,678 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666034	33,574,881 - 33,587,047 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fchsd1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624774	867,895 - 879,518 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624774	867,864 - 880,929 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in FCHSD1
122 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium			5		1		6				10
Low	5	5	17	6	5	6		2	12	8		6
Below cutoff								4

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005617307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005617308	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022408746	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038458305	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038469659	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038469660	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038469661	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038469662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038530437	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038530438	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038530439	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038530440	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038594671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038594672	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038594673	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038594674	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038658716	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038658718	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038658719	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038658720	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002618342	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005314476	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005321855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005321856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005355455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005355456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005390014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005390015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005423047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005423048	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000373	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000010029 ⟹ ENSCAFP00000009302

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	2	36,602,460 - 36,612,199 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000075906 ⟹ ENSCAFP00000044751

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	2	36,608,645 - 36,612,199 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000077640 ⟹ ENSCAFP00000060362

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	2	36,603,556 - 36,612,199 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845029374 ⟹ ENSCAFP00845023088

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	2	37,054,524 - 37,066,405 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845029476 ⟹ ENSCAFP00845023158

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	2	37,054,524 - 37,066,405 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845029566 ⟹ ENSCAFP00845023225

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	2	37,062,852 - 37,066,405 (-)	Ensembl

RefSeq Acc Id:

XM_005617307 ⟹ XP_005617364

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	2	36,601,969 - 36,612,262 (-)	NCBI
Dog10K_Boxer_Tasha	2	33,653,988 - 33,664,163 (-)	NCBI

Sequence:

show sequence

TTTGGCGTGGGCGGGGCTTCCTCGAGTTCCGGAGTTGAGTCGCTTCCCTTGGCCGGCGCGGAGA
TGCAGCCGCCGCCCCGAAAAGTGAAGCCAGCCCAGGTGGTGAAGCTTCGCTTCCTGGAGCAGCT
GAGCATCCTTCAGACCCGGCAGCAGAGGGAGGCAGATCTATTGGAAGACATCAGGTCCTACAGC
AAGCAGAGGGCAGCCATTGAACGGGAATATGGACAGGCACTCCAGAAACTGGCTGGGCCGTTCC
TGAAGAAGGAAGGGCACCGGAGTGGGGAGATGGACAGCAGACCTTCTCTGGAGAGAGGCAGGAT
GGTGTTTGGTGCCTGGCGCTGCTTGCTGGATGCCACCGTGGCCGGTGGCCAAGCCCGGCTCCAG
GCGTCTGACCGATACCGTGACCTGGCAGGGGGCACAGGGCGGAGTGCCAAGGAGCAGGTGCTTA
GGAAGGGAGCAGAGAGCCTCCAGAAGGCGCAAGCTGAGGTGCTGCAGTCTGTTCGGGAGCTGAG
CCGGAGTCGGAAGCTGTATGGGCAACGGGAACGTGTGTGGGCCTTGGCACAGGAGAAGGCAGCT
GATGTACAGGCTAGACTGAACCGAAGTGACCATGGGCTCTTCCACACTCGGACCAGTCTCCAGA
AACTCAGCACCAAGCTTTCTGCCCAGTCAGCCCAGTACTCCCGGCAGCTGAGAGCAGCCCGCAA
TGAGTACCTGCTCAACTTGGTGGCCACCAATGCTCACCTTGACCACTACTACCAGGAGGAATTG
CCAGCCTTGCTCAAGGCCCTGGTCAGTGAGCTGTTGGAACACTTGAGAGACCCCTTGACCTTGC
TAAGCCGCACTGAGCTGGAAGCTGCAGAGATGGCTCTTGAGCATGCCCGCCGAGGAGGACAGGC
AACCTCCCAGGTAAGCTGGGAGCAGGATCTGAAGCTCTTTCTTCAGGAACCTGGAGTATTTTCC
CCCACACCACCTCAGGAGTTTCAGCCTGCAGGGACTGATCAGGTGTGTGCCCTGGAGTTGGAGG
GGGATGCAGGAAGCATGGCTGGGGACACTAGCCTGGAGAAAGAGGTTCAGCGCTGGACAAGCCG
AGCTGCCCGAGACTACAAGATCCAGAACCATGGACATCGGGTGTTGCAGCGGCTGGAGCAGAGG
CGACAGCAGGCTCCAGAGCGGGAGGCCCCAGGTATAGAACAGCGGCTACAGGAAGTGAAGGAAA
GCATCCGGCGGGCACAGGTGAGCCAGGTGAAGGGAGCTGCCCGGCTGGCTCTGCTACAAGGAGC
TGGCCTAGATGTACAGCACTGGCTGAAGCCAGCCATGACTCAGGCTCAGGATGAGGTGGAGCAG
GAGCGACGTCTTAGTGAGGCCCGCCTCTCCCAGAGGGACCTCTCTCCCACGGCTGAGGATGCTG
AGCTCTCTGACTTTGAGGAATGTGAGGAGACAGGGGAGCTCTTTGAGGAGCCTGCCCCTACAGC
CTTGGCCACTAGGCCCCTCCCCTGCCCTGCACATGTGGTGTTCAGCTATCAGGCAGGGCATGAG
GATGAGCTGACTATCACAGAGGGCGAGTGGCTGGAGGTCATAGAAGAAGGAGATGCTGATGAAT
GGGTCAAGGCTCGAAACCAGCACGGCGAGGTAGGCTTTGTCCCTGAGCGGTATCTCAACTTCCC
GGACCTCTCCTTCCCTGAGAGTGGCCACGACAGCGATAATCCCTCAGGGGCAGAGCCCACAGCT
TTCCTGGCCCGTGCCCTATACAGCTACACAGGACAGAGTGCAGAGGAGCTGAGCTTCCCTGAGG
GGGCGCTTATCCGCCTGCTGCCCCGGGCCCAGGATGGAGTGGATGATGGCTTCTGGAGGGGAGA
ATTTGGGGGCTATGTTGGGGTTTTCCCCTCCCTGCTAGTGGAGGAATTGCTTGGCTCCCCAGGA
CCCCCTGAACTCTCAGACCCAGAACAGATGCTGCCATCCCCTTCTCCTCCTAGCTTCTCACCTC
CTGTGCCCACCTCTGCCTTGGATGGAGCCCTTGCATCTGTGCTGCCTGTGGACCAAGACCTGGG
CTGCCCTGCACCCCTGGACATGATGGCACCTCGACTCAGGCCGATGCGCCCACCGCCTCCCCCA
CCAGTTAAAGCTCCGGATCCTGGCCACCCAGATTCTCTCACCTGAAGCCAGGGGGACTGCCATC
CCCCAGTGATGCTGCTGTCCCATGATGTCAGAGACCACCCTCTCAATGATCTGGAGTGACAAAG
CCAAAAGCTGGAGTCTCCCCCATTTCCACTCTCACCTCCCTGGGTAGAAACTTTCTCTCTCCCC
ATTTCTGGGGCTGGAACTCACTCCTTTCCCCCCCCGCCATCATACTTCTCTCTTTAGGGTTGGA
ACAACCCCTCTTTCTTCTGCCACTAGCCCACCTTTAAGGTGGTGAAATATCCTGAAATATCTGG
GGCTGGAACCCGTCTTCCAAAGTCTTGAGTGGCTCCAGCCCATCCGTGTCTCCGCCCTGGCTCT
TTGACCCACCCCACTGTGTCTGTGACCCATGCCACATAGGTTGGGAGCTGGGATAGGGGCGGGC
CTGTCAAAAGGAGCTGGAGCCAGTATGCAAAACAGCTGTAATGGTCTGAGTGGATTTATTGACA
GTGAATAAAGGGCACTAAGCCCAA

hide sequence

RefSeq Acc Id:

XM_005617308 ⟹ XP_005617365

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	2	36,601,969 - 36,612,262 (-)	NCBI
Dog10K_Boxer_Tasha	2	33,653,988 - 33,664,163 (-)	NCBI

Sequence:

show sequence

TTTGGCGTGGGCGGGGCTTCCTCGAGTTCCGGAGTTGAGTCGCTTCCCTTGGCCGGCGCGGAGA
TGCAGCCGCCGCCCCGAAAAGTGAAGCCAGCCCAGGTGGTGAAGCTTCGCTTCCTGGAGCAGCT
GAGCATCCTTCAGACCCGGCAGCAGAGGGAGGCAGATCTATTGGAAGACATCAGGTCCTACAGC
AAGCAGAGGGCAGCCATTGAACGGGAATATGGACAGGCACTCCAGAAACTGGCTGGGCCGTTCC
TGAAGAAGGAAGGGCACCGGAGTGGGGAGATGGACAGCAGGATGGTGTTTGGTGCCTGGCGCTG
CTTGCTGGATGCCACCGTGGCCGGTGGCCAAGCCCGGCTCCAGGCGTCTGACCGATACCGTGAC
CTGGCAGGGGGCACAGGGCGGAGTGCCAAGGAGCAGGTGCTTAGGAAGGGAGCAGAGAGCCTCC
AGAAGGCGCAAGCTGAGGTGCTGCAGTCTGTTCGGGAGCTGAGCCGGAGTCGGAAGCTGTATGG
GCAACGGGAACGTGTGTGGGCCTTGGCACAGGAGAAGGCAGCTGATGTACAGGCTAGACTGAAC
CGAAGTGACCATGGGCTCTTCCACACTCGGACCAGTCTCCAGAAACTCAGCACCAAGCTTTCTG
CCCAGTCAGCCCAGTACTCCCGGCAGCTGAGAGCAGCCCGCAATGAGTACCTGCTCAACTTGGT
GGCCACCAATGCTCACCTTGACCACTACTACCAGGAGGAATTGCCAGCCTTGCTCAAGGCCCTG
GTCAGTGAGCTGTTGGAACACTTGAGAGACCCCTTGACCTTGCTAAGCCGCACTGAGCTGGAAG
CTGCAGAGATGGCTCTTGAGCATGCCCGCCGAGGAGGACAGGCAACCTCCCAGGTAAGCTGGGA
GCAGGATCTGAAGCTCTTTCTTCAGGAACCTGGAGTATTTTCCCCCACACCACCTCAGGAGTTT
CAGCCTGCAGGGACTGATCAGGTGTGTGCCCTGGAGTTGGAGGGGGATGCAGGAAGCATGGCTG
GGGACACTAGCCTGGAGAAAGAGGTTCAGCGCTGGACAAGCCGAGCTGCCCGAGACTACAAGAT
CCAGAACCATGGACATCGGGTGTTGCAGCGGCTGGAGCAGAGGCGACAGCAGGCTCCAGAGCGG
GAGGCCCCAGGTATAGAACAGCGGCTACAGGAAGTGAAGGAAAGCATCCGGCGGGCACAGGTGA
GCCAGGTGAAGGGAGCTGCCCGGCTGGCTCTGCTACAAGGAGCTGGCCTAGATGTACAGCACTG
GCTGAAGCCAGCCATGACTCAGGCTCAGGATGAGGTGGAGCAGGAGCGACGTCTTAGTGAGGCC
CGCCTCTCCCAGAGGGACCTCTCTCCCACGGCTGAGGATGCTGAGCTCTCTGACTTTGAGGAAT
GTGAGGAGACAGGGGAGCTCTTTGAGGAGCCTGCCCCTACAGCCTTGGCCACTAGGCCCCTCCC
CTGCCCTGCACATGTGGTGTTCAGCTATCAGGCAGGGCATGAGGATGAGCTGACTATCACAGAG
GGCGAGTGGCTGGAGGTCATAGAAGAAGGAGATGCTGATGAATGGGTCAAGGCTCGAAACCAGC
ACGGCGAGGTAGGCTTTGTCCCTGAGCGGTATCTCAACTTCCCGGACCTCTCCTTCCCTGAGAG
TGGCCACGACAGCGATAATCCCTCAGGGGCAGAGCCCACAGCTTTCCTGGCCCGTGCCCTATAC
AGCTACACAGGACAGAGTGCAGAGGAGCTGAGCTTCCCTGAGGGGGCGCTTATCCGCCTGCTGC
CCCGGGCCCAGGATGGAGTGGATGATGGCTTCTGGAGGGGAGAATTTGGGGGCTATGTTGGGGT
TTTCCCCTCCCTGCTAGTGGAGGAATTGCTTGGCTCCCCAGGACCCCCTGAACTCTCAGACCCA
GAACAGATGCTGCCATCCCCTTCTCCTCCTAGCTTCTCACCTCCTGTGCCCACCTCTGCCTTGG
ATGGAGCCCTTGCATCTGTGCTGCCTGTGGACCAAGACCTGGGCTGCCCTGCACCCCTGGACAT
GATGGCACCTCGACTCAGGCCGATGCGCCCACCGCCTCCCCCACCAGTTAAAGCTCCGGATCCT
GGCCACCCAGATTCTCTCACCTGAAGCCAGGGGGACTGCCATCCCCCAGTGATGCTGCTGTCCC
ATGATGTCAGAGACCACCCTCTCAATGATCTGGAGTGACAAAGCCAAAAGCTGGAGTCTCCCCC
ATTTCCACTCTCACCTCCCTGGGTAGAAACTTTCTCTCTCCCCATTTCTGGGGCTGGAACTCAC
TCCTTTCCCCCCCCGCCATCATACTTCTCTCTTTAGGGTTGGAACAACCCCTCTTTCTTCTGCC
ACTAGCCCACCTTTAAGGTGGTGAAATATCCTGAAATATCTGGGGCTGGAACCCGTCTTCCAAA
GTCTTGAGTGGCTCCAGCCCATCCGTGTCTCCGCCCTGGCTCTTTGACCCACCCCACTGTGTCT
GTGACCCATGCCACATAGGTTGGGAGCTGGGATAGGGGCGGGCCTGTCAAAAGGAGCTGGAGCC
AGTATGCAAAACAGCTGTAATGGTCTGAGTGGATTTATTGACAGTGAATAAAGGGCACTAAGCC
CAA

hide sequence

RefSeq Acc Id:

XM_022408746 ⟹ XP_022264454

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	2	36,601,969 - 36,612,262 (-)	NCBI
Dog10K_Boxer_Tasha	2	33,653,988 - 33,664,163 (-)	NCBI

Sequence:

show sequence

TTTGGCGTGGGCGGGGCTTCCTCGAGTTCCGGAGTTGAGTCGCTTCCCTTGGCCGGCGCGGAGA
TGCAGCCGCCGCCCCGAAAAGTGAAGCCAGCCCAGGTGGTGAAGCTTCGCTTCCTGGAGCAGCT
GAGCATCCTTCAGACCCGGCAGCAGAGGGAGGCAGATCTATTGGAAGACATCAGGTCCTACAGC
AAGCAGAGGGCAGCCATTGAACGGGAATATGGACAGGCACTCCAGAAACTGGCTGGGCCGTTCC
TGAAGAAGGAAGGGCACCGGAGTGGGGAGATGGACAGCAGACCTTCTCTGGAGAGAGGCAGGAT
GGTGTTTGGTGCCTGGCGCTGCTTGCTGGATGCCACCGTGGCCGGTGGCCAAGCCCGGCTCCAG
GCGTCTGACCGATACCGTGACCTGGCAGGGGGCACAGGGCGGAGTGCCAAGGAGCAGGTGCTTA
GGAAGGGAGCAGAGAGCCTCCAGAAGGCGCAAGCTGAGGTGCTGCAGTCTGTTCGGGAGCTGAG
CCGGAGTCGGAAGCTGTATGGGCAACGGGAACGTGTGTGGGCCTTGGCACAGGAGAAGGCAGCT
GATGTACAGGCTAGACTGAACCGAAGTGACCATGGGCTCTTCCACACTCGGACCAGTCTCCAGA
AACTCAGCACCAAGCTTTCTGCCCAGTCAGCCCAGTACTCCCGGCAGCTGAGAGCAGCCCGCAA
TGAGTACCTGCTCAACTTGGTGGCCACCAATGCTCACCTTGACCACTACTACCAGGAGGAATTG
CCAGCCTTGCTCAAGGCCCTGGTCAGTGAGCTGTTGGAACACTTGAGAGACCCCTTGACCTTGC
TAAGCCGCACTGAGCTGGAAGCTGCAGAGATGGCTCTTGAGCATGCCCGCCGAGGAGGACAGGC
AACCTCCCAGGTAAGCTGGGAGCAGGATCTGAAGCTCTTTCTTCAGGAACCTGGAGTATTTTCC
CCCACACCACCTCAGGAGTTTCAGCCTGCAGGGACTGATCAGGTGTGTGCCCTGGAGTTGGAGG
GGGATGCAGGAAGCATGGCTGGGGACACTAGCCTGGAGAAAGAGGTTCAGCGCTGGACAAGCCG
AGCTGCCCGAGACTACAAGATCCAGAACCATGGACATCGGGTGTTGCAGCGGCTGGAGCAGAGG
CGACAGCAGGCTCCAGAGCGGGAGGCCCCAGGTATAGAACAGCGGCTACAGGAAGTGAAGGAAA
GCATCCGGCGGGCACAGGTGAGCCAGGTGAAGGGAGCTGCCCGGCTGGCTCTGCTACAAGGAGC
TGGCCTAGATGTACAGCACTGGCTGAAGCCAGCCATGACTCAGGCTCAGGATGAGGTGGAGCAG
GAGCGACGTCTTAGTGAGGCCCGCCTCTCCCAGAGGGACCTCTCTCCCACGGCTGAGGATGCTG
AGCTCTCTGACTTTGAGGAATGTGAGGAGACAGGGGAGCTCTTTGAGGAGCCTGCCCCTACAGC
CTTGGCCACTAGGCCCCTCCCCTGCCCTGCACATGTGGTGTTCAGCTATCAGGCAGGGCATGAG
GATGAGCTGACTATCACAGAGGGCGAGTGGCTGGAGGTCATAGAAGAAGGAGATGCTGATGAAT
GGGTCAAGATGCTGCCATCCCCTTCTCCTCCTAGCTTCTCACCTCCTGTGCCCACCTCTGCCTT
GGATGGAGCCCTTGCATCTGTGCTGCCTGTGGACCAAGACCTGGGCTGCCCTGCACCCCTGGAC
ATGATGGCACCTCGACTCAGGCCGATGCGCCCACCGCCTCCCCCACCAGTTAAAGCTCCGGATC
CTGGCCACCCAGATTCTCTCACCTGAAGCCAGGGGGACTGCCATCCCCCAGTGATGCTGCTGTC
CCATGATGTCAGAGACCACCCTCTCAATGATCTGGAGTGACAAAGCCAAAAGCTGGAGTCTCCC
CCATTTCCACTCTCACCTCCCTGGGTAGAAACTTTCTCTCTCCCCATTTCTGGGGCTGGAACTC
ACTCCTTTCCCCCCCCGCCATCATACTTCTCTCTTTAGGGTTGGAACAACCCCTCTTTCTTCTG
CCACTAGCCCACCTTTAAGGTGGTGAAATATCCTGAAATATCTGGGGCTGGAACCCGTCTTCCA
AAGTCTTGAGTGGCTCCAGCCCATCCGTGTCTCCGCCCTGGCTCTTTGACCCACCCCACTGTGT
CTGTGACCCATGCCACATAGGTTGGGAGCTGGGATAGGGGCGGGCCTGTCAAAAGGAGCTGGAG
CCAGTATGCAAAACAGCTGTAATGGTCTGAGTGGATTTATTGACAGTGAATAAAGGGCACTAAG
CCCAA

hide sequence

RefSeq Acc Id:

XM_038458305 ⟹ XP_038314233

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	2	33,654,686 - 33,664,163 (-)	NCBI

RefSeq Acc Id:

XM_038469659 ⟹ XP_038325587

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	2	34,130,792 - 34,141,033 (-)	NCBI

RefSeq Acc Id:

XM_038469660 ⟹ XP_038325588

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	2	34,130,792 - 34,141,033 (-)	NCBI

RefSeq Acc Id:

XM_038469661 ⟹ XP_038325589

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	2	34,131,490 - 34,141,033 (-)	NCBI

RefSeq Acc Id:

XM_038469662 ⟹ XP_038325590

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	2	34,130,792 - 34,141,033 (-)	NCBI

RefSeq Acc Id:

XM_038530437 ⟹ XP_038386365

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	2	35,749,609 - 35,759,851 (-)	NCBI

RefSeq Acc Id:

XM_038530438 ⟹ XP_038386366

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	2	35,749,609 - 35,759,851 (-)	NCBI

RefSeq Acc Id:

XM_038530439 ⟹ XP_038386367

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	2	35,750,306 - 35,759,851 (-)	NCBI

RefSeq Acc Id:

XM_038530440 ⟹ XP_038386368

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	2	35,749,609 - 35,759,851 (-)	NCBI

RefSeq Acc Id:

XM_038594671 ⟹ XP_038450599

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	2	34,942,324 - 34,952,545 (-)	NCBI

RefSeq Acc Id:

XM_038594672 ⟹ XP_038450600

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	2	34,942,324 - 34,952,545 (-)	NCBI

RefSeq Acc Id:

XM_038594673 ⟹ XP_038450601

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	2	34,943,019 - 34,952,545 (-)	NCBI

RefSeq Acc Id:

XM_038594674 ⟹ XP_038450602

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	2	34,942,324 - 34,952,545 (-)	NCBI

RefSeq Acc Id:

XM_038658716 ⟹ XP_038514644

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	2	37,056,295 - 37,066,469 (-)	NCBI

RefSeq Acc Id:

XM_038658718 ⟹ XP_038514646

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	2	37,056,295 - 37,066,469 (-)	NCBI

RefSeq Acc Id:

XM_038658719 ⟹ XP_038514647

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	2	37,056,989 - 37,066,469 (-)	NCBI

RefSeq Acc Id:

XM_038658720 ⟹ XP_038514648

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	2	37,056,295 - 37,066,469 (-)	NCBI

RefSeq Acc Id:

XR_002618342

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	2	36,602,444 - 36,612,262 (-)	NCBI
Dog10K_Boxer_Tasha	2	33,653,988 - 33,664,163 (-)	NCBI

Sequence:

show sequence

TTTGGCGTGGGCGGGGCTTCCTCGAGTTCCGGAGTTGAGTCGCTTCCCTTGGCCGGCGCGGAGA
TGCAGCCGCCGCCCCGAAAAGTGAAGCCAGCCCAGGTGGTGAAGCTTCGCTTCCTGGAGCAGCT
GAGCATCCTTCAGACCCGGCAGCAGAGGGAGGCAGATCTATTGGAAGACATCAGGTCCTACAGC
AAGCAGAGGGCAGCCATTGAACGGGAATATGGACAGGCACTCCAGAAACTGGCTGGGCCGTTCC
TGAAGAAGGAAGGGCACCGGAGTGGGGAGATGGACAGCAGACCTTCTCTGGAGAGAGGCAGGAT
GGTGTTTGGTGCCTGGCGCTGCTTGCTGGATGCCACCGTGGCCGGTGGCCAAGCCCGGCTCCAG
GCGTCTGACCGATACCGTGACCTGGCAGGGGGCACAGGGCGGAGTGCCAAGGAGCAGGTGCTTA
GGAAGGGAGCAGAGAGCCTCCAGAAGGCGCAAGCTGAGGTGCTGCAGTCTGTTCGGGAGCTGAG
CCGGAGTCGGAAGCTGTATGGGCAACGGGAACGTGTGTGGGCCTTGGCACAGGAGAAGGCAGCT
GATGTACAGGCTAGACTGAACCGAAGTGACCATGGGCTCTTCCACACTCGGACCAGTCTCCAGA
AACTCAGCACCAAGCTTTCTGCCCAGTCAGCCCAGTACTCCCGGCAGCTGAGAGCAGCCCGCAA
TGAGTACCTGCTCAACTTGGTGGCCACCAATGCTCACCTTGACCACTACTACCAGGAGGAATTG
CCAGCCTTGCTCAAGGCCCTGGTCAGTGAGCTGTTGGAACACTTGAGAGACCCCTTGACCTTGC
TAAGCCGCACTGAGCTGGAAGCTGCAGAGATGGCTCTTGAGCATGCCCGCCGAGGAGGACAGGC
AACCTCCCAGGTAAGCTGGGAGCAGGATCTGAAGCTCTTTCTTCAGGAACCTGGAGTATTTTCC
CCCACACCACCTCAGGAGTTTCAGCCTGCAGGGACTGATCAGGTGTGTGCCCTGGAGTTGGAGG
GGGATGCAGGAAGCATGGCTGGGGACACTAGCCTGGAGAAAGAGGTTCAGCGCTGGACAAGCCG
AGCTGCCCGAGACTACAAGATCCAGAACCATGGACATCGGGTGTTGCAGCGGCTGGAGCAGAGG
CGACAGCAGGCTCCAGAGCGGGAGGCCCCAGGTATAGAACAGCGGCTACAGGAAGTGAAGGAAA
GCATCCGGCGGGCACAGGTGAGCCAGGTGAAGGGAGCTGCCCGGCTGGCTCTGCTACAAGGAGC
TGGCCTAGATGTACAGCACTGGCTGAAGCCAGCCATGACTCAGGCTCAGGATGAGGTGGAGCAG
GAGCGACGTCTTAGTGAGGCCCGCCTCTCCCAGAGGGACCTCTCTCCCACGGCTGAGGATGCTG
AGCTCTCTGACTTTGAGGAATGTGAGGAGACAGGGGAGCTCTTTGAGGAGCCTGCCCCTACAGC
CTTGGCCACTAGGCCCCTCCCCTGCCCTGCACATGTGGTGTTCAGCTATCAGGCAGGGCATGAG
GATGAGCTGACTATCACAGAGGGCGAGTGGCTGGAGGTCATAGAAGAAGGAGATGCTGATGAAT
GGGTCAAGGCTCGAAACCAGCACGGCGAGGTAGGCTTTGTCCCTGAGCGGTATCTCAACTTCCC
GGACCTCTCCTTCCCTGAGAGTGGCCACGACAGCGATAATCCCTCAGGGGCAGAGCCCACAGAT
GCTGCCATCCCCTTCTCCTCCTAGCTTCTCACCTCCTGTGCCCACCTCTGCCTTGGATGGAGCC
CTTGCATCTGTGCTGCCTGTGGACCAAGACCTGGGCTGCCCTGCACCCCTGGACATGATGGCAC
CTCGACTCAGGCCGATGCGCCCACCGCCTCCCCCACCAGTTAAAGCTCCGGATCCTGGCCACCC
AGATTCTCTCACCTGAAGCCAGGGGGACTGCC

hide sequence

RefSeq Acc Id:

XR_005314476

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	2	33,655,421 - 33,664,163 (-)	NCBI

RefSeq Acc Id:

XR_005321855

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	2	34,130,792 - 34,141,033 (-)	NCBI

RefSeq Acc Id:

XR_005321856

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	2	34,132,225 - 34,141,033 (-)	NCBI

RefSeq Acc Id:

XR_005355455

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	2	35,749,609 - 35,759,851 (-)	NCBI

RefSeq Acc Id:

XR_005355456

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	2	35,751,041 - 35,759,851 (-)	NCBI

RefSeq Acc Id:

XR_005390014

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	2	34,942,324 - 34,952,545 (-)	NCBI

RefSeq Acc Id:

XR_005390015

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	2	34,943,755 - 34,952,545 (-)	NCBI

RefSeq Acc Id:

XR_005423047

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	2	37,056,295 - 37,066,469 (-)	NCBI

RefSeq Acc Id:

XR_005423048

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	2	37,057,725 - 37,066,469 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005617364	(Get FASTA)	NCBI Sequence Viewer
	XP_005617365	(Get FASTA)	NCBI Sequence Viewer
	XP_022264454	(Get FASTA)	NCBI Sequence Viewer
	XP_038314233	(Get FASTA)	NCBI Sequence Viewer
	XP_038325587	(Get FASTA)	NCBI Sequence Viewer
	XP_038325588	(Get FASTA)	NCBI Sequence Viewer
	XP_038325589	(Get FASTA)	NCBI Sequence Viewer
	XP_038325590	(Get FASTA)	NCBI Sequence Viewer
	XP_038386365	(Get FASTA)	NCBI Sequence Viewer
	XP_038386366	(Get FASTA)	NCBI Sequence Viewer
	XP_038386367	(Get FASTA)	NCBI Sequence Viewer
	XP_038386368	(Get FASTA)	NCBI Sequence Viewer
	XP_038450599	(Get FASTA)	NCBI Sequence Viewer
	XP_038450600	(Get FASTA)	NCBI Sequence Viewer
	XP_038450601	(Get FASTA)	NCBI Sequence Viewer
	XP_038450602	(Get FASTA)	NCBI Sequence Viewer
	XP_038514644	(Get FASTA)	NCBI Sequence Viewer
	XP_038514646	(Get FASTA)	NCBI Sequence Viewer
	XP_038514647	(Get FASTA)	NCBI Sequence Viewer
	XP_038514648	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000009302.4
	ENSCAFP00000044751.1
	ENSCAFP00000060362.2
	ENSCAFP00030002925.1
	ENSCAFP00030002995.1
	ENSCAFP00040009034.1
	ENSCAFP00040009111.1
	ENSCAFP00845023088
	ENSCAFP00845023088.1
	ENSCAFP00845023158.1
	ENSCAFP00845023225.1

RefSeq Acc Id:	XP_005617365 ⟸ XM_005617308
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0QL61 (UniProtKB/TrEMBL), A0A8I3P0A7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQPPPRKVKPAQVVKLRFLEQLSILQTRQQREADLLEDIRSYSKQRAAIEREYGQALQKLAGPF LKKEGHRSGEMDSRMVFGAWRCLLDATVAGGQARLQASDRYRDLAGGTGRSAKEQVLRKGAESL QKAQAEVLQSVRELSRSRKLYGQRERVWALAQEKAADVQARLNRSDHGLFHTRTSLQKLSTKLS AQSAQYSRQLRAARNEYLLNLVATNAHLDHYYQEELPALLKALVSELLEHLRDPLTLLSRTELE AAEMALEHARRGGQATSQVSWEQDLKLFLQEPGVFSPTPPQEFQPAGTDQVCALELEGDAGSMA GDTSLEKEVQRWTSRAARDYKIQNHGHRVLQRLEQRRQQAPEREAPGIEQRLQEVKESIRRAQV SQVKGAARLALLQGAGLDVQHWLKPAMTQAQDEVEQERRLSEARLSQRDLSPTAEDAELSDFEE CEETGELFEEPAPTALATRPLPCPAHVVFSYQAGHEDELTITEGEWLEVIEEGDADEWVKARNQ HGEVGFVPERYLNFPDLSFPESGHDSDNPSGAEPTAFLARALYSYTGQSAEELSFPEGALIRLL PRAQDGVDDGFWRGEFGGYVGVFPSLLVEELLGSPGPPELSDPEQMLPSPSPPSFSPPVPTSAL DGALASVLPVDQDLGCPAPLDMMAPRLRPMRPPPPPPVKAPDPGHPDSLT hide sequence

RefSeq Acc Id:	XP_005617364 ⟸ XM_005617307
- Peptide Label:	isoform X1
- UniProtKB:	A0A8P0SBR9 (UniProtKB/TrEMBL), A0A8C0QL61 (UniProtKB/TrEMBL), A0A8I3P0A7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQPPPRKVKPAQVVKLRFLEQLSILQTRQQREADLLEDIRSYSKQRAAIEREYGQALQKLAGPF LKKEGHRSGEMDSRPSLERGRMVFGAWRCLLDATVAGGQARLQASDRYRDLAGGTGRSAKEQVL RKGAESLQKAQAEVLQSVRELSRSRKLYGQRERVWALAQEKAADVQARLNRSDHGLFHTRTSLQ KLSTKLSAQSAQYSRQLRAARNEYLLNLVATNAHLDHYYQEELPALLKALVSELLEHLRDPLTL LSRTELEAAEMALEHARRGGQATSQVSWEQDLKLFLQEPGVFSPTPPQEFQPAGTDQVCALELE GDAGSMAGDTSLEKEVQRWTSRAARDYKIQNHGHRVLQRLEQRRQQAPEREAPGIEQRLQEVKE SIRRAQVSQVKGAARLALLQGAGLDVQHWLKPAMTQAQDEVEQERRLSEARLSQRDLSPTAEDA ELSDFEECEETGELFEEPAPTALATRPLPCPAHVVFSYQAGHEDELTITEGEWLEVIEEGDADE WVKARNQHGEVGFVPERYLNFPDLSFPESGHDSDNPSGAEPTAFLARALYSYTGQSAEELSFPE GALIRLLPRAQDGVDDGFWRGEFGGYVGVFPSLLVEELLGSPGPPELSDPEQMLPSPSPPSFSP PVPTSALDGALASVLPVDQDLGCPAPLDMMAPRLRPMRPPPPPPVKAPDPGHPDSLT hide sequence

RefSeq Acc Id:	XP_022264454 ⟸ XM_022408746
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0QL61 (UniProtKB/TrEMBL), A0A8I3P0A7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQPPPRKVKPAQVVKLRFLEQLSILQTRQQREADLLEDIRSYSKQRAAIEREYGQALQKLAGPF LKKEGHRSGEMDSRPSLERGRMVFGAWRCLLDATVAGGQARLQASDRYRDLAGGTGRSAKEQVL RKGAESLQKAQAEVLQSVRELSRSRKLYGQRERVWALAQEKAADVQARLNRSDHGLFHTRTSLQ KLSTKLSAQSAQYSRQLRAARNEYLLNLVATNAHLDHYYQEELPALLKALVSELLEHLRDPLTL LSRTELEAAEMALEHARRGGQATSQVSWEQDLKLFLQEPGVFSPTPPQEFQPAGTDQVCALELE GDAGSMAGDTSLEKEVQRWTSRAARDYKIQNHGHRVLQRLEQRRQQAPEREAPGIEQRLQEVKE SIRRAQVSQVKGAARLALLQGAGLDVQHWLKPAMTQAQDEVEQERRLSEARLSQRDLSPTAEDA ELSDFEECEETGELFEEPAPTALATRPLPCPAHVVFSYQAGHEDELTITEGEWLEVIEEGDADE WVKMLPSPSPPSFSPPVPTSALDGALASVLPVDQDLGCPAPLDMMAPRLRPMRPPPPPPVKAPD PGHPDSLT hide sequence

RefSeq Acc Id:

ENSCAFP00000060362 ⟸ ENSCAFT00000077640

RefSeq Acc Id:

ENSCAFP00000009302 ⟸ ENSCAFT00000010029

RefSeq Acc Id:

ENSCAFP00000044751 ⟸ ENSCAFT00000075906

RefSeq Acc Id:	XP_038325588 ⟸ XM_038469660
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038325590 ⟸ XM_038469662
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038325587 ⟸ XM_038469659
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038325589 ⟸ XM_038469661
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038450600 ⟸ XM_038594672
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038450602 ⟸ XM_038594674
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038450599 ⟸ XM_038594671
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038450601 ⟸ XM_038594673
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038514646 ⟸ XM_038658718
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0QL61 (UniProtKB/TrEMBL), A0A8I3P0A7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038514648 ⟸ XM_038658720
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0QL61 (UniProtKB/TrEMBL), A0A8I3P0A7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038514644 ⟸ XM_038658716
- Peptide Label:	isoform X1
- UniProtKB:	A0A8P0SBR9 (UniProtKB/TrEMBL), A0A8C0QL61 (UniProtKB/TrEMBL), A0A8I3P0A7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038514647 ⟸ XM_038658719
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0QL61 (UniProtKB/TrEMBL), A0A8I3P0A7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038314233 ⟸ XM_038458305
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0QL61 (UniProtKB/TrEMBL), A0A8I3P0A7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038386366 ⟸ XM_038530438
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0QL61 (UniProtKB/TrEMBL), A0A8I3P0A7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038386368 ⟸ XM_038530440
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0QL61 (UniProtKB/TrEMBL), A0A8I3P0A7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038386365 ⟸ XM_038530437
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0QL61 (UniProtKB/TrEMBL), A0A8I3P0A7 (UniProtKB/TrEMBL), A0A8P0SBR9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038386367 ⟸ XM_038530439
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0QL61 (UniProtKB/TrEMBL), A0A8I3P0A7 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845023225 ⟸ ENSCAFT00845029566

RefSeq Acc Id:

ENSCAFP00845023088 ⟸ ENSCAFT00845029374

RefSeq Acc Id:

ENSCAFP00845023158 ⟸ ENSCAFT00845029476

Protein Domains

F-BAR SH3

Promoters

RGD ID:

13682458

Promoter ID:

EPDNEW_C526

Type:

multiple initiation site

Name:

FCHSD1_1

Description:

FCH and double SH3 domains 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	2	36,612,226 - 36,612,286	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000006203	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030001699	UniProtKB/TrEMBL
	ENSCAFG00040005367	UniProtKB/TrEMBL
	ENSCAFG00845016411	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000010029.5	UniProtKB/TrEMBL
	ENSCAFT00000075906.2	UniProtKB/TrEMBL
	ENSCAFT00000077640.2	UniProtKB/TrEMBL
	ENSCAFT00030003296.1	UniProtKB/TrEMBL
	ENSCAFT00030003381.1	UniProtKB/TrEMBL
	ENSCAFT00040010406.1	UniProtKB/TrEMBL
	ENSCAFT00040010499.1	UniProtKB/TrEMBL
	ENSCAFT00845029374	ENTREZGENE
	ENSCAFT00845029374.1	UniProtKB/TrEMBL
	ENSCAFT00845029476.1	UniProtKB/TrEMBL
	ENSCAFT00845029566.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1270.60	UniProtKB/TrEMBL
	SH3 Domains	UniProtKB/TrEMBL
InterPro	AH/BAR_dom_sf	UniProtKB/TrEMBL
	F_BAR	UniProtKB/TrEMBL
	FCH_dom	UniProtKB/TrEMBL
	FCHSD_SH3_1	UniProtKB/TrEMBL
	SH3-like_dom_sf	UniProtKB/TrEMBL
	SH3_domain	UniProtKB/TrEMBL
KEGG Report	cfa:487187	UniProtKB/TrEMBL
NCBI Gene	FCHSD1	ENTREZGENE
PANTHER	FCH AND DOUBLE SH3 DOMAINS PROTEIN	UniProtKB/TrEMBL
	PTHR15735:SF4	UniProtKB/TrEMBL
Pfam	FCH	UniProtKB/TrEMBL
	SH3_1	UniProtKB/TrEMBL
	SH3_9	UniProtKB/TrEMBL
PROSITE	F_BAR	UniProtKB/TrEMBL
	SH3	UniProtKB/TrEMBL
SMART	FCH	UniProtKB/TrEMBL
	SH3	UniProtKB/TrEMBL
Superfamily-SCOP	SSF103657	UniProtKB/TrEMBL
	SSF50044	UniProtKB/TrEMBL
UniProt	A0A8C0M0B1_CANLF	UniProtKB/TrEMBL
	A0A8C0QL61	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NR32_CANLF	UniProtKB/TrEMBL
	A0A8I3P0A7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3P5M4_CANLF	UniProtKB/TrEMBL
	A0A8P0P9C2_CANLF	UniProtKB/TrEMBL
	A0A8P0SBR9	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:40806	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar