C28H10orf95 (chromosome 28 C10orf95 homolog)

Gene: C28H10orf95 (chromosome 28 C10orf95 homolog) Canis lupus familiaris

Analyze

Symbol:

C28H10orf95

Name:

chromosome 28 C10orf95 homolog

RGD ID:

12298704

Description:

ASSOCIATED WITH genetic disease (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

LOC106557959; uncharacterized LOC106557959; uncharacterized protein C10orf95 homolog; uncharacterized protein LOC106557959

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	14,947,869 - 14,949,414 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	14,948,373 - 14,949,032 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	15,120,691 - 15,121,783 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	15,422,368 - 15,423,460 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	15,422,396 - 15,423,055 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	14,967,401 - 14,968,492 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	15,006,506 - 15,007,598 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	15,139,122 - 15,140,214 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

Genomics

Comparative Map Data

C28H10orf95
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	14,947,869 - 14,949,414 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	14,948,373 - 14,949,032 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	15,120,691 - 15,121,783 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	15,422,368 - 15,423,460 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	15,422,396 - 15,423,055 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	14,967,401 - 14,968,492 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	15,006,506 - 15,007,598 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	15,139,122 - 15,140,214 (-)	NCBI		UU_Cfam_GSD_1.0

C10orf95
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	102,449,837 - 102,451,543 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	102,449,837 - 102,451,543 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	104,209,594 - 104,211,300 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	104,199,584 - 104,201,290 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	104,199,583 - 104,201,290	NCBI
Celera	10	97,950,507 - 97,952,213 (-)	NCBI		Celera
Cytogenetic Map	10	q24.32	NCBI
HuRef	10	97,843,302 - 97,845,271 (-)	NCBI		HuRef
CHM1_1	10	104,493,060 - 104,494,766 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	103,334,824 - 103,336,530 (-)	NCBI		T2T-CHM13v2.0

2310034G01Rik
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	46,336,640 - 46,337,427 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	46,336,640 - 46,338,741 (-)	Ensembl		GRCm39 Ensembl
GRCm38	19	46,348,201 - 46,348,988 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	46,348,201 - 46,350,302 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	46,422,691 - 46,432,834 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	46,422,691 - 46,423,914 (-)	NCBI		MGSCv36	mm8
Celera	19	47,111,549 - 47,121,732 (-)	NCBI		Celera
Cytogenetic Map	19	C3	NCBI
cM Map	19	38.82	NCBI

C1h10orf95
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	255,143,264 - 255,157,901 (-)	NCBI		GRCr8
mRatBN7.2	1	245,210,228 - 245,212,080 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	245,210,973 - 245,211,602 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	253,331,660 - 253,333,512 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	260,026,277 - 260,028,129 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	252,678,080 - 252,679,932 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Cytogenetic Map	1	q54	NCBI

C8H10orf95
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	114,337,781 - 114,338,967 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	114,343,103 - 114,344,289 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	99,053,081 - 99,054,982 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

CUNH10orf95
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	31,825,661 - 31,828,488 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936600	3,428,561 - 3,429,778 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CUNH10orf95
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	95,479,426 - 95,481,662 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666048	56,585,418 - 56,587,021 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Variants

Variants in C28H10orf95
5 total Variants

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014108944	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038440414	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038515035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038578641	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038642825	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000298	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000071	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000374	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000087435 ⟹ ENSCAFP00000044624

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	28	14,948,373 - 14,949,032 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845043166 ⟹ ENSCAFP00845033845

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	28	15,422,396 - 15,423,055 (-)	Ensembl

RefSeq Acc Id:

XM_014108944 ⟹ XP_013964419

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	28	14,947,869 - 14,949,414 (-)	NCBI
Dog10K_Boxer_Tasha	28	15,120,691 - 15,121,783 (-)	NCBI

Sequence:

show sequence

TGGAGGAGAGCAGTGCCACTAAAAACTGGTGAGGAGTCTGCTCCGGACCTCTCTGGCTCCCCCA
AATGCTGGGGACCAGCTCCCCTGGGCTGAAGGAGACGACTGGGGAACCACCTGGGAAGAACACT
TCACCGCTAAGGGCTTGAAAAGGCCTTGGGTCCTTACTGCCTACTGAGAGCCAGGGGTTCGGCC
CAGCCCTGGGACAAGAGGTGCGGACCAGCTCCCAGCATGTACTCCTTCAGCAGCCTGGCGCCCG
GGGAAGGCATCTGGCCTCCCCTACAGCCCCTCCCCTATGCCTACCTGACTGGCCCTCTGCTGCT
GCCCCCCATCCACGCTCACAGCTTCTGCAGCCGGCCCCCCGGCCTGATCGCAGGTGAGTGGCCG
GCTCCGCGGGAATACCACTGCTTCCACGGCCCGGGCGCGCCCCTGGCGGCCGCGCCGCCCTCGT
GGGCCTTCCCGCAGGCCTACGCCGCGGCCCTGCGCCCGCGTTTCCCCGCTCCAGGCTGCCTGGG
GCCATCGCTACGAGGGACCGCGGCGGAGGGGAGCGCGGCTGCCCGGCGCGAGGCCCCGTGGCCG
GAGGGCGCCAGCCAGCAGGCCGAGCTGCGCTGGGGCCGCGTGGAGCGCGCGCTGGACCCGCGCC
TCGAGCTGCCGGACCTAGTGCGCCGGGAGCTGCGGCGCGTGTACGGCACGTACCCGCGCACCGA
CGTGCGCGTCACCTACCGCGGCGGGCAGTTCCTGCTTCGGGCCGCGCCGCGCGTCCGCGAGCAC
GAGTACCGTGTGCAGAGGCGCGTGCTGCGGCCGCCCGCCAGCGGCGACAGCGGCGACAGCAGCC
CGGCCGCGGAAGCGGCGGAGTGTGGCCGCCGGAGGAAGAGGAAAGGCCCGAGCTGAGGACGCCG
CAGGGCCCGGCGGCCGGCCCGGTGAGCACGCGCGCGCCTCTCCTCTCCTGCGCCCGCCGCCTCC
GGCCCGCTACTGGGGAGACCTCCGCGGCGCGCCGGCGCCGGTGCACCTGTCACCTCGCTTTTTG
CTTTCGTTTTTTACCGAGCCTACACGCCGCCCACCTGCTGCACTTCCCTAATTTCCCTCGCGTT
TTTGCTGGATAGCGGGGGAAGGGCCAGAAGAGATCCAGAACATCTCGGGCGGGTGTCCTGTTTC
TCTTCCCTTCCACTCGGACTTGGGAAACGTGGGTGTGAGCTGGAAGAGGGGCGTGGACCCTTTG
TTTCGCCCGCCCCTCCTCCTCCGGGTCTTAGAAGCCTGCCCGGCACCAAGCCCCCACTTTCCCT
TCCCCTCTCCTGCGTCTCACAGAGCTCCCCGAATTGCCCAAGCTCCTCTCCAAGCTGAGGGCCC
ACCTCTCGGCAGATTGTAGGGAACAGTAAATAAATGAAGTCAAGTGTA

hide sequence

RefSeq Acc Id:

XM_038440414 ⟹ XP_038296342

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	28	15,422,368 - 15,423,460 (-)	NCBI

RefSeq Acc Id:

XM_038515035 ⟹ XP_038370963

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	28	14,967,401 - 14,968,492 (-)	NCBI

RefSeq Acc Id:

XM_038578641 ⟹ XP_038434569

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	28	15,139,122 - 15,140,214 (-)	NCBI

RefSeq Acc Id:

XM_038642825 ⟹ XP_038498753

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	28	15,006,506 - 15,007,598 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_013964419	(Get FASTA)	NCBI Sequence Viewer
	XP_038296342	(Get FASTA)	NCBI Sequence Viewer
	XP_038370963	(Get FASTA)	NCBI Sequence Viewer
	XP_038434569	(Get FASTA)	NCBI Sequence Viewer
	XP_038498753	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000044624.1
	ENSCAFP00030039793.1
	ENSCAFP00845033845
	ENSCAFP00845033845.1

RefSeq Acc Id:

XP_013964419 ⟸ XM_014108944

- UniProtKB:

A0A8C0PC48 (UniProtKB/TrEMBL), A0A8I3PRI0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MYSFSSLAPGEGIWPPLQPLPYAYLTGPLLLPPIHAHSFCSRPPGLIAGEWPAPREYHCFHGPG
APLAAAPPSWAFPQAYAAALRPRFPAPGCLGPSLRGTAAEGSAAARREAPWPEGASQQAELRWG
RVERALDPRLELPDLVRRELRRVYGTYPRTDVRVTYRGGQFLLRAAPRVREHEYRVQRRVLRPP
ASGDSGDSSPAAEAAECGRRRKRKGPS

hide sequence

RefSeq Acc Id:

ENSCAFP00000044624 ⟸ ENSCAFT00000087435

RefSeq Acc Id:

XP_038370963 ⟸ XM_038515035

RefSeq Acc Id:

XP_038498753 ⟸ XM_038642825

RefSeq Acc Id:	XP_038296342 ⟸ XM_038440414
- UniProtKB:	A0A8C0PC48 (UniProtKB/TrEMBL), A0A8I3PRI0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038434569 ⟸ XM_038578641
- UniProtKB:	A0A8C0PC48 (UniProtKB/TrEMBL), A0A8I3PRI0 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845033845 ⟸ ENSCAFT00845043166

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000048372	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030024751	UniProtKB/TrEMBL
	ENSCAFG00845024439	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000087435.2	UniProtKB/TrEMBL
	ENSCAFT00030045562.1	UniProtKB/TrEMBL
	ENSCAFT00845043166	ENTREZGENE
	ENSCAFT00845043166.1	UniProtKB/TrEMBL
KEGG Report	cfa:106557959	UniProtKB/TrEMBL
NCBI Gene	LOC106557959	ENTREZGENE
UniProt	A0A8C0PC48	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PRI0	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:109323	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-01-12	C28H10orf95	chromosome 28 C10orf95 homolog	LOC106557959	uncharacterized LOC106557959	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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