TTYH2 (tweety family member 2) - Rat Genome Database

Name: TTYH2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: TTYH2 (tweety family member 2) Canis lupus familiaris

Analyze

Symbol:

TTYH2

Name:

tweety family member 2

RGD ID:

12293664

Description:

ENCODES a protein that exhibits calcium ion binding (ortholog); chloride channel activity (ortholog); volume-sensitive anion channel activity (ortholog); INVOLVED IN L-glutamate transmembrane transport (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN chloride channel complex (inferred); membrane (inferred); plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

LOC106559221; tweety homolog 2

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TTYH2 (tweety family member 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Ttyh2 (tweety family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ttyh2 (tweety family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ttyh2 (tweety family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TTYH2 (tweety family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ttyh2 (tweety family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TTYH2 (tweety family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TTYH2 (tweety family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ttyh2 (tweety family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	6,120,586 - 6,156,956 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	6,120,575 - 6,156,957 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	6,742,365 - 6,778,896 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	6,792,981 - 6,829,555 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	6,792,986 - 6,829,564 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	6,833,458 - 6,870,176 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	6,936,998 - 6,973,531 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	6,996,992 - 7,033,550 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chloride transmembrane transport (IEA)

chloride transport (IEA)

L-glutamate transmembrane transport (ISO)

monoatomic ion transmembrane transport (IEA)

monoatomic ion transport (IEA)

Cellular Component

chloride channel complex (IEA)

membrane (IEA)

plasma membrane (IEA)

Molecular Function

calcium ion binding (ISO)

chloride channel activity (IEA,ISO)

intracellularly calcium-gated chloride channel activity (IEA)

protein binding (ISO)

volume-sensitive anion channel activity (ISO)

volume-sensitive chloride channel activity (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

TTYH2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	6,120,586 - 6,156,956 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	6,120,575 - 6,156,957 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	6,742,365 - 6,778,896 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	6,792,981 - 6,829,555 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	6,792,986 - 6,829,564 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	6,833,458 - 6,870,176 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	6,936,998 - 6,973,531 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	6,996,992 - 7,033,550 (-)	NCBI		UU_Cfam_GSD_1.0

TTYH2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	74,213,571 - 74,262,020 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	74,213,571 - 74,262,020 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	72,209,710 - 72,258,159 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	69,721,291 - 69,769,754 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	69,756,099 - 69,769,750	NCBI
Celera	17	68,796,241 - 68,850,209 (+)	NCBI		Celera
Cytogenetic Map	17	q25.1	NCBI
HuRef	17	67,620,155 - 67,668,483 (+)	NCBI		HuRef
CHM1_1	17	72,274,323 - 72,322,720 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	75,104,409 - 75,152,817 (+)	NCBI		T2T-CHM13v2.0

Ttyh2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	114,566,294 - 114,611,810 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	114,566,257 - 114,611,803 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	114,675,468 - 114,720,984 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	114,675,431 - 114,720,977 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	114,536,782 - 114,582,298 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	114,491,558 - 114,537,074 (+)	NCBI		MGSCv36	mm8
Celera	11	126,434,785 - 126,481,284 (+)	NCBI		Celera
Cytogenetic Map	11	E2	NCBI
cM Map	11	79.85	NCBI

Ttyh2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	100,208,129 - 100,252,505 (+)	NCBI		GRCr8
mRatBN7.2	10	99,709,063 - 99,753,449 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	99,709,007 - 99,753,444 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	104,767,015 - 104,811,823 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	104,230,134 - 104,274,937 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	99,630,130 - 99,674,500 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	103,206,085 - 103,248,911 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	103,206,014 - 103,248,862 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	102,865,658 - 102,908,420 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	104,553,284 - 104,596,673 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	10	98,313,869 - 98,344,814 (+)	NCBI		Celera
Cytogenetic Map	10	q32.1	NCBI

Ttyh2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955553	1,137,762 - 1,179,195 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955553	1,137,762 - 1,179,195 (+)	NCBI	ChiLan1.0	ChiLan1.0

TTYH2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	90,244,278 - 90,292,730 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	95,066,716 - 95,115,130 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	68,152,290 - 68,200,690 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	73,710,144 - 73,758,546 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	73,710,144 - 73,758,546 (+)	Ensembl	panpan1.1		panPan2

Ttyh2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	6,707,938 - 6,733,543 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936655	205,774 - 231,342 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936655	205,761 - 231,357 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TTYH2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	6,838,425 - 6,881,472 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	6,838,420 - 6,881,562 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	6,865,496 - 6,908,598 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TTYH2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	47,372,879 - 47,421,471 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	47,372,897 - 47,421,435 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	18,187,232 - 18,235,971 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ttyh2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624801	4,200,102 - 4,241,332 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624801	4,200,038 - 4,242,906 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TTYH2
581 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium									5
Low	5	5	21	6	6	6	6	6	7	8	10	6
Below cutoff			1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014116211	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038485008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038485009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038546708	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038546709	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038610700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038610701	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038626397	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038675828	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038675829	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000091	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000007288 ⟹ ENSCAFP00000006750

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	9	6,120,575 - 6,156,957 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845033599 ⟹ ENSCAFP00845026305

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	9	6,792,986 - 6,829,564 (-)	Ensembl

RefSeq Acc Id:

XM_014116211 ⟹ XP_013971686

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	6,120,586 - 6,156,956 (-)	NCBI
Dog10K_Boxer_Tasha	9	6,742,365 - 6,778,896 (-)	NCBI

Sequence:

show sequence

GATGAGAGTTACCGGGAGTCACTGCTGCTGCTGGGGCTGGTGGCCGCCATCTGCCTGGGCCTGA
ACCTCATTTTCCTCGCGGCCTACGTGGTCTGCGTGTGCTGCTGCAGACAGGACGAGGCCGTGCA
GACCAAGCGGCGCAACCCGTGCTGTGTCACCTGGACGGCGGTGGTGGCCGGGCTCATCTGCTGT
GCTGCGGTGGGTGTCGGTTTCTATGGAAATAGCGAAACCAACGACGGCGTGTACCAGCTCATCT
ACTCCTTGGACAACGCGAACCACACCTTCTCCGGGATAGACGCGCTGGTGTCCGGAACCACCCA
AAAGATGGAGGTGGACCTGGAGCAGCACCTGGCTCGGCTCAGTGAGATCTTTGCAGCACGGGGT
GATTATATCCAGACGCTGAAGTTCGTGCAGCAGATGGCCGGCAACATCATGGTCCAGCTCTCAG
GGCTGCCCGTGTGGAGGGAGGTCACCACGGAGCTGACCGAGCTGGCCGACCAGACTGGCTACGT
GGAGTACTACAGATGGCTTTCCTACCTCCTGCTCTTCATCCTGGACCTGGTCATCTGCCTTATT
GCCTGCCTGGGACTGGCCAGGCGCTCCAGGTGTCTCTTGGCCTCGATGCTGTGCTGTGGGGTGC
TGGGCCTGTTCCTCAGCTGGACGTCTCTGGCCGCTGACAGCGCTGCAGCAGTGGGCACCAGTGA
CTTCTGCTCGGCTCCCGACACCTTCATCCTGAATGTCACAGAGGGCCAGATCCGCACAGAGGTG
ACCCGCTACTACCTATACTGGAGTCAGAGCGGAAGCAGCCCCTTTCAGCAGGCACTGACCGCCT
TCCAGCGCTCGCTCACCACCATGCAGATCCAGGTGGCCGGCCTGCTGCAGTTTGCTGTGCCCCT
CTTCCCCACAGCAGAGAAAGACCTGCTCGGGATCCAGCTCCTGTTGAACTCATCGGAGTCCAAC
CTTCACCAGCTGACAGCCATGCTGGATTGCCGAGGGTTACACAAGGACTACCTGGACGCCCTTG
CTGGCATCTGCTATGATGGCATTGAGGGCTTGCTCTACCTTGGCCTCTTCTCTCTCCTGGCTGC
CCTGGCCTTCTCCACCATGATCTGTGCGGGGCCTCGGGCCTGGAAGCACTTAACCACCAGGAAC
AGAGACTATGACGACATCGACAGTGACGACCCTTTCAACCCCCAGGCCCGACGCATCGCCGCTC
ACAACCCACCTCGGGGGCAGCTTCGCAGCTTCTGCAGCTACAGCAGCGGCCTGGGCAGCCAGAC
CAGTTTGCAGCCCCCGGCTCAGACCATCTCCAACGCCCCGGTCTCGGAGTACATGAACCAGGCC
ATGCTCTTCGGCGGGAACCCACGCTACGAGAACGTGCCGCTCATCGGAAGAGGCTCCCCTCCTC
CCACGTATTCCCCCAGCATGAGGGCCACCTACCTGTCCGTGGCGGACGAGCACCTGAGACACTA
CGGCAATGAGTTTCCAGCCTAACACCCTGTCTGCAGAGGTGCCTGCCTCCCCGAGCCGGTTTGG
TTTTGAATGAAGGCCAACGCGAGCTGCGTTTCTTTAATAGAAACCAAAGGCATCTGGAGACTGG
GCGCCGGCCCACAGGATTGTCAGGCTCTCGGGCTGCGGAGGAGCGTCAGCGATGCGGGGGTATC
GACCTGAGCTCAGCCGAGATTCCCAACCGAAAGCCCAGGCAGACAGAAGACCCGTGACTCAGGC
CAGCCTCTCCCTCTTCGCCCTCCTGTCCACGCCAGAAATGCCCCCAGGTGCTTGGCCAAGCTGA
AGCTGGGAGCCTGGTTCCGCTCACCCCTACATCCTCTCCCTCACCAGATGGGAGCTGGCATCGA
AGAGGGCCAGGTCGGGCATCACCTGAGAGATGTAGGTCCTCCTGGATCTTATTGCCGGGCCTCT
GGCTCCCGCAAACCTGGCTCGCGGGTCCAGGTGGCCATTGTCTCCGAGTCCCCTCTCTCCTCCC
GGCTGCACGGCTGGTGGGCAGCGTTTCCCTGCAGGTAAAGGTGGACGGGCTGATCAGGAGATTA
AGGCAGGTGATGTCTCTGATACAATGGGACACTGTCCAAATCGATCCCCGGAGCCAGACGGACC
CTCCCTGGACCACAGAGGGAAGGTGCTGGGGAGCTGTGCGGTGGGTGGCCCCAGGGCCGGGGAC
CATGGCTGCATCCCTGGAAGGCTTCCACAGTGAGACCCTGTGGGGATGTGGGCAACAGCTGCCA
CCTTCTACCCCTCTCCCACCACCCTCCACCACCTCTCCATTCCAGAATCAATGCTGTGAGTTTG
TTCACTACAGATAGGGACAGTCTCAGGTATTAATAGACACTTTGAAAGCGACACTAACTCTCCC
TCCCCCCACCCAGTGTTTTGAATATTTTGATTATCCAAAGAATTGAAACTCCTAGTGCATCCAG
TTTTTACAATAGATGTAGGGCTCATTCCTTACCCCTGGGTTGTATGCCATTGCTTTGCAGATTT
TGCTGGCATCAGCCAGTTCTTTATGGATCTGAAGGAAGGGAAGATTTATAAACAAAGTAGAGAC
CATGAGACATACTGTCCCGAGCTGCTGCTTGGTGGGGATGTGGGTTCATCACGTTCAAGGAGGG
AGGCCCTTTAGGACAGAAAAGCTTAGAGGGACAACTGCACGCACTCTCCTGTCCTGGGGGCTGC
CCAAGTGAATGTCCCCTCCCTTATGTCTTCAGGCAAGTTTGTCTTAAAGGTTTTAGCAAAGTGG
GATGGTGATGTGTGTTGCCCTGAGATGGGCCTCTTCTTCCCTAATCCCATTCCATCCCGTTGTC
CTGGGCCCCCTGAGCTCCACTTGCTCCGTGAGAAGTAGCTTATTGGCCAGGAGGAAATGACCCA
CCATCCTGCCTGCTGAGGATCCAGGGTTAGGGTCTCTGGTGCTTCTAATCTCCTGGCAACTTGG
AGTGCACAGCACGGAAGCCCACGCAGCCTTGCACACCCAAAACCAGGGACACGGGATGACCTGG
CTGGGAACGAGGGCTCCATTTCCATTTTCAAAGAGCCACTTTCCCATCAGGACACTGACAGCAG
AGCAGCTCTTGGTGCCCAGCCACACCTCTACGACAGAAGAGGGCCATAAGGCAGCCTGGACTCT
TGCCTCACCTGCGTTAACCTGTATGTACCGTGTACCATAAACGTATCTGTGTATGGCCACGTCG
CACGCAGATAGGAACTCTGCGACGTCGAGATGTTGCTTCTTAACATTTTGTTGTTGGCGACTGT
AGAGTTGTTTTGAATGCGTATAAACTAAACTAGAATCCTTTGGGTAGTTCCTGAAGGAGCCAGG
TGGGCACACCTCTGCTTGATGCATGTGCGCCCTCACCTGGGGAGAAATAAACCACTTGTACTAA
AATGTG

hide sequence

RefSeq Acc Id:

XM_038485008 ⟹ XP_038340936

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	9	6,833,458 - 6,870,176 (-)	NCBI

RefSeq Acc Id:

XM_038485009 ⟹ XP_038340937

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	9	6,833,458 - 6,859,451 (-)	NCBI

RefSeq Acc Id:

XM_038546708 ⟹ XP_038402636

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	6,996,992 - 7,033,550 (-)	NCBI

RefSeq Acc Id:

XM_038546709 ⟹ XP_038402637

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	6,996,992 - 7,022,821 (-)	NCBI

RefSeq Acc Id:

XM_038610700 ⟹ XP_038466628

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	6,936,998 - 6,973,531 (-)	NCBI

RefSeq Acc Id:

XM_038610701 ⟹ XP_038466629

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	6,936,998 - 6,962,812 (-)	NCBI

RefSeq Acc Id:

XM_038626397 ⟹ XP_038482325

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	9	6,742,365 - 6,768,063 (-)	NCBI

RefSeq Acc Id:

XM_038675828 ⟹ XP_038531756

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	6,792,981 - 6,829,555 (-)	NCBI

RefSeq Acc Id:

XM_038675829 ⟹ XP_038531757

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	6,792,981 - 6,818,724 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_013971686	(Get FASTA)	NCBI Sequence Viewer
	XP_038340936	(Get FASTA)	NCBI Sequence Viewer
	XP_038340937	(Get FASTA)	NCBI Sequence Viewer
	XP_038402636	(Get FASTA)	NCBI Sequence Viewer
	XP_038402637	(Get FASTA)	NCBI Sequence Viewer
	XP_038466628	(Get FASTA)	NCBI Sequence Viewer
	XP_038466629	(Get FASTA)	NCBI Sequence Viewer
	XP_038482325	(Get FASTA)	NCBI Sequence Viewer
	XP_038531756	(Get FASTA)	NCBI Sequence Viewer
	XP_038531757	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000006750.5
	ENSCAFP00000068433.1
	ENSCAFP00000069880.1
	ENSCAFP00000071936.1
	ENSCAFP00845026305
	ENSCAFP00845026305.1

RefSeq Acc Id:	XP_013971686 ⟸ XM_014116211
- Peptide Label:	isoform X1
- UniProtKB:	A0A8P0N788 (UniProtKB/TrEMBL)
- Sequence:	show sequence DESYRESLLLLGLVAAICLGLNLIFLAAYVVCVCCCRQDEAVQTKRRNPCCVTWTAVVAGLICC AAVGVGFYGNSETNDGVYQLIYSLDNANHTFSGIDALVSGTTQKMEVDLEQHLARLSEIFAARG DYIQTLKFVQQMAGNIMVQLSGLPVWREVTTELTELADQTGYVEYYRWLSYLLLFILDLVICLI ACLGLARRSRCLLASMLCCGVLGLFLSWTSLAADSAAAVGTSDFCSAPDTFILNVTEGQIRTEV TRYYLYWSQSGSSPFQQALTAFQRSLTTMQIQVAGLLQFAVPLFPTAEKDLLGIQLLLNSSESN LHQLTAMLDCRGLHKDYLDALAGICYDGIEGLLYLGLFSLLAALAFSTMICAGPRAWKHLTTRN RDYDDIDSDDPFNPQARRIAAHNPPRGQLRSFCSYSSGLGSQTSLQPPAQTISNAPVSEYMNQA MLFGGNPRYENVPLIGRGSPPPTYSPSMRATYLSVADEHLRHYGNEFPA hide sequence

RefSeq Acc Id:

ENSCAFP00000006750 ⟸ ENSCAFT00000007288

RefSeq Acc Id:	XP_038340936 ⟸ XM_038485008
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038340937 ⟸ XM_038485009
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038466628 ⟸ XM_038610700
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038466629 ⟸ XM_038610701
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038531756 ⟸ XM_038675828
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LEV0 (UniProtKB/TrEMBL), A0A8I3NXW9 (UniProtKB/TrEMBL), A0A8P0N788 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038531757 ⟸ XM_038675829
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038482325 ⟸ XM_038626397
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038402636 ⟸ XM_038546708
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LEV0 (UniProtKB/TrEMBL), A0A8I3NXW9 (UniProtKB/TrEMBL), A0A8P0N788 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038402637 ⟸ XM_038546709
- Peptide Label:	isoform X2

RefSeq Acc Id:

ENSCAFP00845026305 ⟸ ENSCAFT00845033599

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000004524	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00845018975	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000007288.5	UniProtKB/TrEMBL
	ENSCAFT00000095910.1	UniProtKB/TrEMBL
	ENSCAFT00000101572.1	UniProtKB/TrEMBL
	ENSCAFT00000102164.1	UniProtKB/TrEMBL
	ENSCAFT00845033599	ENTREZGENE
	ENSCAFT00845033599.1	UniProtKB/TrEMBL
InterPro	Tweety	UniProtKB/TrEMBL
NCBI Gene	LOC106559221	ENTREZGENE
PANTHER	PROTEIN TWEETY HOMOLOG 2	UniProtKB/TrEMBL
	PTHR12424	UniProtKB/TrEMBL
Pfam	Tweety	UniProtKB/TrEMBL
UniProt	A0A8C0LEV0	ENTREZGENE
	A0A8I3NXW9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0N788	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0PHF0_CANLF	UniProtKB/TrEMBL
	A0A8P0PJC3_CANLF	UniProtKB/TrEMBL
	A0A8P0TQL2_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:49681	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-11-21	TTYH2	tweety family member 2	TTYH2	tweety family member 2	Data merged from RGD:12200166	737654	PROVISIONAL
2017-09-12	TTYH2	tweety family member 2	LOC106559221	protein tweety homolog 2-like	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar