ISOC1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 11 | 18,011,330 - 18,029,330 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 11 | 18,012,333 - 18,028,489 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 11 | 16,807,451 - 16,825,469 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 11 | 18,760,942 - 18,778,889 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 11 | 18,760,942 - 18,778,934 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 11 | 17,480,530 - 17,498,517 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 11 | 17,319,280 - 17,337,261 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 11 | 17,931,905 - 17,950,287 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
ISOC1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 5 | 129,094,749 - 129,114,028 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 5 | 129,094,749 - 129,114,028 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 5 | 128,430,442 - 128,449,721 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 5 | 128,458,341 - 128,477,620 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 5 | 128,458,338 - 128,477,730 | NCBI | | | | | Celera | 5 | 124,561,590 - 124,580,869 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q23.3 | NCBI | | | | | HuRef | 5 | 123,621,725 - 123,641,469 (+) | NCBI | | HuRef | | | CHM1_1 | 5 | 127,863,093 - 127,882,374 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 5 | 129,597,478 - 129,632,738 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Isoc1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 18 | 58,792,554 - 58,812,642 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 18 | 58,792,538 - 58,813,440 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 18 | 58,659,482 - 58,679,570 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 18 | 58,659,466 - 58,680,368 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 18 | 58,819,136 - 58,839,224 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 18 | 58,784,851 - 58,804,939 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 18 | 59,962,819 - 59,982,937 (+) | NCBI | | Celera | | | Cytogenetic Map | 18 | D3 | NCBI | | | | | cM Map | 18 | 33.71 | NCBI | | | | |
|
Isoc1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 18 | 54,356,757 - 54,377,170 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 18 | 52,158,790 - 52,179,206 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 18 | 52,158,790 - 52,178,703 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 18 | 54,182,706 - 54,203,140 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 18 | 54,897,271 - 54,917,718 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 18 | 52,709,462 - 52,729,877 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 18 | 53,727,203 - 53,747,612 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 18 | 53,727,209 - 53,745,200 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 18 | 53,008,359 - 53,028,768 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 18 | 54,471,690 - 54,492,099 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 18 | 54,535,657 - 54,556,067 (+) | NCBI | | | | | Celera | 18 | 50,269,258 - 50,289,538 (+) | NCBI | | Celera | | | Cytogenetic Map | 18 | q12.1 | NCBI | | | | |
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Isoc1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955415 | 2,091,857 - 2,110,374 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955415 | 2,091,857 - 2,110,313 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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ISOC1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 4 | 124,402,367 - 124,421,758 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 5 | 122,541,929 - 122,561,338 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 5 | 124,508,166 - 124,527,560 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 5 | 130,270,416 - 130,289,582 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 5 | 130,270,123 - 130,289,570 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
Isoc1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024407213 | 140,681,736 - 140,704,138 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936504 | 2,255,177 - 2,278,113 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936504 | 2,255,702 - 2,276,356 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
ISOC1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 2 | 131,857,168 - 131,877,631 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 131,857,126 - 131,877,873 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 137,198,549 - 137,219,688 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
ISOC1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 23 | 32,039,732 - 32,059,821 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 23 | 32,039,811 - 32,059,848 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666034 | 45,976,316 - 45,996,444 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Isoc1 (Heterocephalus glaber - naked mole-rat) |
|