AKR1A1 (aldo-keto reductase family 1 member A1) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: AKR1A1 (aldo-keto reductase family 1 member A1) Canis lupus familiaris
Analyze
Symbol: AKR1A1
Name: aldo-keto reductase family 1 member A1
RGD ID: 12283459
Description: ENCODES a protein that exhibits NAD-retinol dehydrogenase activity (ortholog); oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor (ortholog); INVOLVED IN aldehyde catabolic process (ortholog); D-glucuronate catabolic process (ortholog); glucuronate catabolic process to xylulose 5-phosphate (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; prostaglandin biosynthetic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); breast cancer (ortholog); Carcinogenesis (ortholog); FOUND IN cytosol (ortholog); synapse (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: alcohol dehydrogenase [NADP(+)]
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: LOC475374  
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11514,792,398 - 14,808,805 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1514,742,012 - 14,808,592 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1514,913,465 - 14,929,729 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01514,947,192 - 14,963,694 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1514,896,489 - 14,963,353 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11514,744,329 - 14,760,787 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01514,814,053 - 14,828,473 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01514,884,045 - 14,900,543 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
AKR1A1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11514,792,398 - 14,808,805 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1514,742,012 - 14,808,592 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1514,913,465 - 14,929,729 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01514,947,192 - 14,963,694 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1514,896,489 - 14,963,353 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11514,744,329 - 14,760,787 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01514,814,053 - 14,828,473 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01514,884,045 - 14,900,543 (-)NCBIUU_Cfam_GSD_1.0
AKR1A1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38145,550,826 - 45,570,049 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl145,550,543 - 45,570,049 (+)EnsemblGRCh38hg38GRCh38
GRCh37146,016,498 - 46,035,721 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36145,789,085 - 45,808,308 (+)NCBINCBI36Build 36hg18NCBI36
Build 34145,685,590 - 45,704,813NCBI
Celera144,300,464 - 44,319,706 (+)NCBICelera
Cytogenetic Map1p34.1NCBI
HuRef144,127,818 - 44,147,063 (+)NCBIHuRef
CHM1_1146,133,579 - 46,152,870 (+)NCBICHM1_1
T2T-CHM13v2.0145,423,192 - 45,442,415 (+)NCBIT2T-CHM13v2.0
Akr1a1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394116,493,707 - 116,508,871 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4116,493,707 - 116,508,877 (-)EnsemblGRCm39 Ensembl
GRCm384116,636,510 - 116,651,674 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4116,636,510 - 116,651,680 (-)EnsemblGRCm38mm10GRCm38
MGSCv374116,309,115 - 116,324,256 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364116,134,442 - 116,149,583 (-)NCBIMGSCv36mm8
Celera4115,370,207 - 115,385,626 (-)NCBICelera
Cytogenetic Map4D1NCBI
Akr1a1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.25130,092,945 - 130,130,277 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5130,092,732 - 130,113,674 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5132,717,057 - 132,734,057 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.05134,471,650 - 134,488,650 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.05134,494,047 - 134,511,049 (-)NCBIRnor_WKY
Rnor_6.05135,482,068 - 135,498,693 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5135,482,068 - 135,498,822 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05139,278,242 - 139,294,867 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45136,920,561 - 136,937,422 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15136,925,785 - 136,942,923 (-)NCBI
Celera5128,620,481 - 128,637,092 (-)NCBICelera
Cytogenetic Map5q35NCBI
Akr1a1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546412,714,717 - 12,729,662 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546412,715,238 - 12,729,034 (-)NCBIChiLan1.0ChiLan1.0
AKR1A1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1146,211,859 - 46,230,072 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl146,211,859 - 46,230,072 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0144,853,867 - 44,871,764 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
Akr1a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505860,855,920 - 60,872,212 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647426,680,676 - 26,697,214 (+)EnsemblSpeTri2.0
SpeTri2.0NW_00493647426,680,736 - 26,696,996 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AKR1A1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6165,811,247 - 165,824,896 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16165,811,245 - 165,825,168 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
AKR1A1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12087,228,348 - 87,245,511 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2087,228,189 - 87,245,466 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603329,719,096 - 29,738,521 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Akr1a1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249061,462,693 - 1,474,214 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249061,463,201 - 1,474,001 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in AKR1A1
177 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00845038617   ⟹   ENSCAFP00845030233
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1514,896,489 - 14,950,474 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845038813   ⟹   ENSCAFP00845030395
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1514,896,489 - 14,950,474 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845038981   ⟹   ENSCAFP00845030531
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1514,896,489 - 14,950,474 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845039152   ⟹   ENSCAFP00845030662
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1514,896,489 - 14,936,569 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845039239   ⟹   ENSCAFP00845030732
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1514,896,489 - 14,936,569 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845039368   ⟹   ENSCAFP00845030845
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1514,896,489 - 14,936,478 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845039495   ⟹   ENSCAFP00845030948
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1514,896,569 - 14,936,569 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845039692   ⟹   ENSCAFP00845031093
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1514,918,873 - 14,963,353 (-)Ensembl
RefSeq Acc Id: NM_001252168   ⟹   NP_001239097
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11514,792,401 - 14,808,592 (-)NCBI
Dog10K_Boxer_Tasha1514,913,465 - 14,929,729 (-)NCBI
ROS_Cfam_1.01514,947,193 - 14,963,472 (-)NCBI
UMICH_Zoey_3.11514,744,329 - 14,760,787 (-)NCBI
UNSW_CanFamBas_1.01514,814,053 - 14,828,473 (-)NCBI
UU_Cfam_GSD_1.01514,884,045 - 14,900,543 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038687206   ⟹   XP_038543134
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01514,947,192 - 14,963,694 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001239097 (Get FASTA)   NCBI Sequence Viewer  
  XP_038543134 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001239097   ⟸   NM_001252168
- Sequence:
RefSeq Acc Id: XP_038543134   ⟸   XM_038687206
- Peptide Label: isoform X1
RefSeq Acc Id: ENSCAFP00845030948   ⟸   ENSCAFT00845039495
RefSeq Acc Id: ENSCAFP00845030233   ⟸   ENSCAFT00845038617
RefSeq Acc Id: ENSCAFP00845030395   ⟸   ENSCAFT00845038813
RefSeq Acc Id: ENSCAFP00845030531   ⟸   ENSCAFT00845038981
RefSeq Acc Id: ENSCAFP00845030732   ⟸   ENSCAFT00845039239
RefSeq Acc Id: ENSCAFP00845030662   ⟸   ENSCAFT00845039152
RefSeq Acc Id: ENSCAFP00845030845   ⟸   ENSCAFT00845039368
RefSeq Acc Id: ENSCAFP00845031093   ⟸   ENSCAFT00845039692
Promoters
RGD ID:13685902
Promoter ID:EPDNEW_C3972
Type:initiation region
Name:AKR1A1_1
Description:aldo-keto reductase family 1 member A1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11514,808,521 - 14,808,581EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000004517 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00000058692 UniProtKB/TrEMBL
  ENSCAFG00030017261 UniProtKB/TrEMBL
  ENSCAFG00030017341 UniProtKB/TrEMBL
  ENSCAFG00040017533 UniProtKB/TrEMBL
  ENSCAFG00845021858 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCAFP00000006806.3 UniProtKB/TrEMBL
  ENSCAFP00000046926.1 UniProtKB/TrEMBL
  ENSCAFP00000051554.2 UniProtKB/TrEMBL
  ENSCAFP00000053679.1 UniProtKB/TrEMBL
  ENSCAFP00000057885.2 UniProtKB/TrEMBL
  ENSCAFP00000060415.2 UniProtKB/TrEMBL
  ENSCAFP00030027747.1 UniProtKB/TrEMBL
  ENSCAFP00030028024.1 UniProtKB/TrEMBL
  ENSCAFP00040028207 UniProtKB/TrEMBL
  ENSCAFP00040028300 UniProtKB/TrEMBL
  ENSCAFP00040028436 UniProtKB/TrEMBL
  ENSCAFP00040028546 UniProtKB/TrEMBL
  ENSCAFP00040028597 UniProtKB/TrEMBL
  ENSCAFP00040028683 UniProtKB/TrEMBL
  ENSCAFP00040028783 UniProtKB/TrEMBL
  ENSCAFP00845030233.1 UniProtKB/TrEMBL
  ENSCAFP00845030395.1 UniProtKB/TrEMBL
  ENSCAFP00845030531.1 UniProtKB/TrEMBL
  ENSCAFP00845030662.1 UniProtKB/TrEMBL
  ENSCAFP00845030732.1 UniProtKB/TrEMBL
  ENSCAFP00845030845.1 UniProtKB/TrEMBL
  ENSCAFP00845031093 ENTREZGENE
  ENSCAFP00845031093.1 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000007346.5 UniProtKB/TrEMBL
  ENSCAFT00000069343.2 UniProtKB/TrEMBL
  ENSCAFT00000081109.2 UniProtKB/TrEMBL
  ENSCAFT00000085225.2 UniProtKB/TrEMBL
  ENSCAFT00000086514.2 UniProtKB/TrEMBL
  ENSCAFT00000088745.2 UniProtKB/TrEMBL
  ENSCAFT00030031821.1 UniProtKB/TrEMBL
  ENSCAFT00030032134.1 UniProtKB/TrEMBL
  ENSCAFT00040032423 UniProtKB/TrEMBL
  ENSCAFT00040032526 UniProtKB/TrEMBL
  ENSCAFT00040032681 UniProtKB/TrEMBL
  ENSCAFT00040032817 UniProtKB/TrEMBL
  ENSCAFT00040032870 UniProtKB/TrEMBL
  ENSCAFT00040032964 UniProtKB/TrEMBL
  ENSCAFT00040033077 UniProtKB/TrEMBL
  ENSCAFT00845038617.1 UniProtKB/TrEMBL
  ENSCAFT00845038813.1 UniProtKB/TrEMBL
  ENSCAFT00845038981.1 UniProtKB/TrEMBL
  ENSCAFT00845039152.1 UniProtKB/TrEMBL
  ENSCAFT00845039239.1 UniProtKB/TrEMBL
  ENSCAFT00845039368.1 UniProtKB/TrEMBL
  ENSCAFT00845039692 ENTREZGENE
  ENSCAFT00845039692.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.10 UniProtKB/TrEMBL
  3.20.20.100 UniProtKB/TrEMBL
InterPro AKR UniProtKB/TrEMBL
  AKR1A UniProtKB/TrEMBL
  Aldo/ket_reductase_CS UniProtKB/TrEMBL
  NADP_OxRdtase_dom UniProtKB/TrEMBL
  NADP_OxRdtase_dom_sf UniProtKB/TrEMBL
  Tetratricopeptide_SHNi-TPR_dom UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/TrEMBL
  TPR_repeat UniProtKB/TrEMBL
NCBI Gene AKR1A1 ENTREZGENE
PANTHER ALDO-KETO REDUCTASE FAMILY 1 MEMBER A1 UniProtKB/TrEMBL
  ALDO/KETO REDUCTASE UniProtKB/TrEMBL
  NUCLEAR AUTOANTIGENIC SPERM PROTEIN UniProtKB/TrEMBL
  NUCLEAR AUTOANTIGENIC SPERM PROTEIN NASP -RELATED UniProtKB/TrEMBL
Pfam Aldo_ket_red UniProtKB/TrEMBL
  SHNi-TPR UniProtKB/TrEMBL
  TPR_8 UniProtKB/TrEMBL
PIRSF AKR UniProtKB/TrEMBL
PRINTS ALDKETRDTASE UniProtKB/TrEMBL
PROSITE ALDOKETO_REDUCTASE_1 UniProtKB/TrEMBL
  ALDOKETO_REDUCTASE_2 UniProtKB/TrEMBL
  ALDOKETO_REDUCTASE_3 UniProtKB/TrEMBL
  TPR UniProtKB/TrEMBL
SMART TPR UniProtKB/TrEMBL
Superfamily-SCOP SSF48452 UniProtKB/TrEMBL
  SSF51430 UniProtKB/TrEMBL
UniProt A0A8C0SY19_CANLF UniProtKB/TrEMBL
  A0A8C0SY59_CANLF UniProtKB/TrEMBL
  A0A8C0SYW5_CANLF UniProtKB/TrEMBL
  A0A8C0T081_CANLF UniProtKB/TrEMBL
  A0A8C0T2N7_CANLF UniProtKB/TrEMBL
  A0A8C0T2V7_CANLF UniProtKB/TrEMBL
  A0A8C0Z0T5_CANLF UniProtKB/TrEMBL
  A0A8I3PBM7_CANLF UniProtKB/TrEMBL
  A0A8I3PEU2_CANLF UniProtKB/TrEMBL
  A0A8I3PF35_CANLF UniProtKB/TrEMBL
  A0A8I3PHU3_CANLF UniProtKB/TrEMBL
  A0A8I3PIF0_CANLF UniProtKB/TrEMBL
  A0A8I3PMD4_CANLF UniProtKB/TrEMBL
  A0A8I3PQT6_CANLF UniProtKB/TrEMBL
  A0A8P0P726_CANLF UniProtKB/TrEMBL
  A0A8P0TC89_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:37768 ENTREZGENE