KIAA0319 (KIAA0319) - Rat Genome Database
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Gene: KIAA0319 (KIAA0319) Canis lupus familiaris
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Symbol: KIAA0319
Name: KIAA0319
RGD ID: 12281815
Description: INVOLVED IN negative regulation of axon extension (ortholog); ASSOCIATED WITH dyslexia (ortholog); FOUND IN early endosome (inferred); integral component of membrane (inferred); intracellular membrane-bounded organelle (inferred)
Type: protein-coding
RefSeq Status: MODEL
Also known as: dyslexia-associated protein KIAA0319 homolog; KIAA0319 ortholog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl3522,591,353 - 22,652,292 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.13522,589,103 - 22,689,549 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
dyslexia  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
KIAA0319
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl3522,591,353 - 22,652,292 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.13522,589,103 - 22,689,549 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
KIAA0319
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl624,544,104 - 24,646,191 (-)EnsemblGRCh38hg38GRCh38
GRCh38624,540,128 - 24,646,191 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37624,544,332 - 24,646,383 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36624,652,311 - 24,754,362 (-)NCBINCBI36hg18NCBI36
Celera625,777,709 - 25,879,725 (-)NCBI
Cytogenetic Map6p22.3NCBI
HuRef624,493,749 - 24,595,804 (-)NCBIHuRef
CHM1_1624,548,492 - 24,650,521 (-)NCBICHM1_1
D130043K22Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391325,029,114 - 25,085,422 (+)NCBIGRCm39mm39
GRCm381324,845,131 - 24,901,439 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1324,845,135 - 24,901,270 (+)EnsemblGRCm38mm10GRCm38
MGSCv371324,937,000 - 24,993,139 (+)NCBIGRCm37mm9NCBIm37
MGSCv361324,852,596 - 24,908,735 (+)NCBImm8
Celera1325,075,796 - 25,131,935 (+)NCBICelera
Cytogenetic Map13A3.1NCBI
RGD1307443
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01742,163,245 - 42,226,725 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1742,165,817 - 42,226,377 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01744,031,044 - 44,094,370 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41747,226,680 - 47,287,240 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11747,230,128 - 47,279,391 (-)NCBI
Celera1739,802,603 - 39,862,958 (-)NCBICelera
Cytogenetic Map17p11NCBI
Kiaa0319
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554832,413,181 - 2,462,735 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554832,404,061 - 2,463,210 (+)NCBIChiLan1.0ChiLan1.0
KIAA0319
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1624,713,922 - 24,815,300 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl624,713,922 - 24,815,300 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0624,377,666 - 24,483,388 (-)NCBIMhudiblu_PPA_v0panPan3
Kiaa0319
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936671870,107 - 912,727 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIAA0319
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl719,383,196 - 19,486,232 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1719,383,189 - 19,487,669 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2720,533,670 - 20,639,029 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KIAA0319
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl1747,603,705 - 47,696,302 (+)Ensembl
ChlSab1.11747,603,506 - 47,702,154 (+)NCBI
Kiaa0319
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247562,377,573 - 2,464,766 (+)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 2 1 1 1
Low 15 5 5 6 11 8 4 6
Below cutoff 5 5 5 6 6 6

Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00000016531   ⟹   ENSCAFP00000015294
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3522,591,998 - 22,652,292 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000047018   ⟹   ENSCAFP00000040164
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3522,591,353 - 22,652,292 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000068199   ⟹   ENSCAFP00000057196
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3522,591,353 - 22,652,292 (-)Ensembl
RefSeq Acc Id: XM_005640075   ⟹   XP_005640132
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13522,589,103 - 22,676,334 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014110595   ⟹   XP_013966070
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13522,589,103 - 22,689,549 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022414384   ⟹   XP_022270092
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13522,589,103 - 22,661,168 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022414385   ⟹   XP_022270093
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13522,589,103 - 22,689,548 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022414386   ⟹   XP_022270094
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13522,589,103 - 22,632,090 (-)NCBI
Sequence:
RefSeq Acc Id: XM_535903   ⟹   XP_535903
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13522,589,103 - 22,689,011 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_013966070   ⟸   XM_014110595
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_535903   ⟸   XM_535903
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005640132   ⟸   XM_005640075
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022270093   ⟸   XM_022414385
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_022270092   ⟸   XM_022414384
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022270094   ⟸   XM_022414386
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: ENSCAFP00000057196   ⟸   ENSCAFT00000068199
RefSeq Acc Id: ENSCAFP00000040164   ⟸   ENSCAFT00000047018
RefSeq Acc Id: ENSCAFP00000015294   ⟸   ENSCAFT00000016531
Protein Domains
MANSC   PKD


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000010398 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCAFP00000015294 UniProtKB/TrEMBL
  ENSCAFP00000040164 ENTREZGENE, UniProtKB/TrEMBL
  ENSCAFP00000057196 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000016531 UniProtKB/TrEMBL
  ENSCAFT00000047018 ENTREZGENE, UniProtKB/TrEMBL
  ENSCAFT00000068199 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro Ig-like_fold UniProtKB/TrEMBL
  KIAA0319-like UniProtKB/TrEMBL
  MANSC_dom UniProtKB/TrEMBL
  MANSC_N UniProtKB/TrEMBL
  PKD/Chitinase_dom UniProtKB/TrEMBL
  PKD/REJ-like UniProtKB/TrEMBL
  PKD_dom UniProtKB/TrEMBL
  PKD_dom_sf UniProtKB/TrEMBL
KEGG Report cfa:478736 UniProtKB/TrEMBL
NCBI Gene KIAA0319 ENTREZGENE
PANTHER PTHR46182 UniProtKB/TrEMBL
Pfam REJ UniProtKB/TrEMBL
PROSITE MANSC UniProtKB/TrEMBL
  PKD UniProtKB/TrEMBL
SMART MANEC UniProtKB/TrEMBL
  PKD UniProtKB/TrEMBL
Superfamily-SCOP SSF49299 UniProtKB/TrEMBL
UniProt A0A5F4CS66_CANLF UniProtKB/TrEMBL
  E2RD96_CANLF UniProtKB/TrEMBL
  J9P3N5_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:42343 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-09-12 KIAA0319  KIAA0319    KIAA0319 ortholog  Symbol and/or name change 5135510 APPROVED