AIDA (axin interactor, dorsalization associated) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: AIDA (axin interactor, dorsalization associated) Canis lupus familiaris
Analyze
Symbol: AIDA
Name: axin interactor, dorsalization associated
RGD ID: 12280535
Description: ENCODES a protein that exhibits phosphatidylinositol binding (inferred); protein domain specific binding (inferred); INVOLVED IN negative regulation of Wnt signaling pathway (ortholog); regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN cytoplasm (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: axin interactor, dorsalization-associated protein
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13816,938,279 - 16,971,200 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3816,939,556 - 16,971,200 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3816,994,631 - 17,027,543 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03816,984,669 - 17,017,699 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3816,983,891 - 17,017,672 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13816,990,054 - 17,022,930 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03817,338,903 - 17,371,799 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03817,634,148 - 17,667,198 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
membrane  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
AIDA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13816,938,279 - 16,971,200 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3816,939,556 - 16,971,200 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3816,994,631 - 17,027,543 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03816,984,669 - 17,017,699 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3816,983,891 - 17,017,672 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13816,990,054 - 17,022,930 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03817,338,903 - 17,371,799 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03817,634,148 - 17,667,198 (-)NCBIUU_Cfam_GSD_1.0
AIDA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381222,668,013 - 222,712,491 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1222,668,013 - 222,713,210 (-)EnsemblGRCh38hg38GRCh38
GRCh371222,841,355 - 222,885,833 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361220,907,978 - 220,952,487 (-)NCBINCBI36Build 36hg18NCBI36
Celera1196,060,430 - 196,105,032 (-)NCBICelera
Cytogenetic Map1q41NCBI
HuRef1193,515,353 - 193,560,247 (-)NCBIHuRef
CHM1_11224,113,870 - 224,158,930 (-)NCBICHM1_1
T2T-CHM13v2.01221,901,757 - 221,946,247 (-)NCBIT2T-CHM13v2.0
Aida
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391183,078,604 - 183,105,356 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1183,078,134 - 183,106,331 (+)EnsemblGRCm39 Ensembl
GRCm381183,297,060 - 183,324,501 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1183,296,590 - 183,325,476 (+)EnsemblGRCm38mm10GRCm38
MGSCv3684,087,219 - 4,089,901 (+)NCBIMGSCv36mm8
Celera1190,298,074 - 190,324,759 (+)NCBICelera
Cytogenetic Map1H5NCBI
Aida
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81397,471,931 - 97,499,531 (+)NCBIGRCr8
mRatBN7.21394,940,311 - 94,967,920 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1394,939,741 - 94,967,920 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1397,445,676 - 97,473,280 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01398,845,486 - 98,873,089 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01396,027,632 - 96,055,235 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.013101,698,096 - 101,724,928 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl13101,698,096 - 101,724,923 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013100,906,568 - 100,933,404 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41399,339,703 - 99,357,665 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1394,467,274 - 94,494,504 (+)NCBICelera
Cytogenetic Map13q26NCBI
Aida
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555201,819,706 - 1,851,273 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555201,819,617 - 1,851,273 (+)NCBIChiLan1.0ChiLan1.0
AIDA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2126,608,479 - 26,652,939 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1126,562,347 - 26,606,494 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01198,341,375 - 198,385,682 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11203,354,925 - 203,399,193 (-)NCBIpanpan1.1PanPan1.1panPan2
AIDA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1011,428,399 - 11,466,643 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11011,430,758 - 11,466,849 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21013,585,250 - 13,621,298 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AIDA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1256,858,138 - 6,900,064 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl256,858,152 - 6,898,175 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660557,096,822 - 7,138,698 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aida
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248355,207,011 - 5,240,269 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248355,206,365 - 5,240,534 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in AIDA
354 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 21 5 6 5 6 6 12 8 10 6
Low 1 1 1
Below cutoff

Sequence


RefSeq Acc Id: ENSCAFT00000021486   ⟹   ENSCAFP00000019953
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3816,939,556 - 16,971,161 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000071994   ⟹   ENSCAFP00000064519
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3816,939,556 - 16,963,115 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000085167   ⟹   ENSCAFP00000048577
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3816,939,556 - 16,971,200 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845054111   ⟹   ENSCAFP00845042513
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3816,983,891 - 17,017,672 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845054118   ⟹   ENSCAFP00845042518
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3816,983,891 - 17,017,672 (-)Ensembl
RefSeq Acc Id: XM_038448503   ⟹   XP_038304431
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03816,984,669 - 17,017,699 (-)NCBI
RefSeq Acc Id: XM_038522410   ⟹   XP_038378338
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13816,990,054 - 17,022,930 (-)NCBI
RefSeq Acc Id: XM_038586208   ⟹   XP_038442136
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03817,634,148 - 17,667,198 (-)NCBI
RefSeq Acc Id: XM_038650615   ⟹   XP_038506543
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03817,338,903 - 17,371,799 (-)NCBI
RefSeq Acc Id: XM_844507   ⟹   XP_849600
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13816,938,279 - 16,971,200 (-)NCBI
Dog10K_Boxer_Tasha3816,994,631 - 17,027,543 (-)NCBI
Sequence:
RefSeq Acc Id: XP_849600   ⟸   XM_844507
- UniProtKB: A0A8C0P6L2 (UniProtKB/TrEMBL),   A0A8C0QTU1 (UniProtKB/TrEMBL),   A0A8I3Q3P5 (UniProtKB/TrEMBL),   A0A8C0SW26 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000019953   ⟸   ENSCAFT00000021486
RefSeq Acc Id: ENSCAFP00000048577   ⟸   ENSCAFT00000085167
RefSeq Acc Id: ENSCAFP00000064519   ⟸   ENSCAFT00000071994
RefSeq Acc Id: XP_038378338   ⟸   XM_038522410
RefSeq Acc Id: XP_038506543   ⟸   XM_038650615
RefSeq Acc Id: XP_038304431   ⟸   XM_038448503
- UniProtKB: A0A8C0P6L2 (UniProtKB/TrEMBL),   A0A8C0QTU1 (UniProtKB/TrEMBL),   A0A8I3Q3P5 (UniProtKB/TrEMBL),   A0A8C0SW26 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038442136   ⟸   XM_038586208
- UniProtKB: A0A8C0P6L2 (UniProtKB/TrEMBL),   A0A8C0QTU1 (UniProtKB/TrEMBL),   A0A8C0SW26 (UniProtKB/TrEMBL),   A0A8I3Q3P5 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845042518   ⟸   ENSCAFT00845054118
RefSeq Acc Id: ENSCAFP00845042513   ⟸   ENSCAFT00845054111
Protein Domains
C2 Aida-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000013540 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030021109 UniProtKB/TrEMBL
  ENSCAFG00040017195 UniProtKB/TrEMBL
  ENSCAFG00845030498 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000021486.4 UniProtKB/TrEMBL
  ENSCAFT00000085167.2 UniProtKB/TrEMBL
  ENSCAFT00030038796.1 UniProtKB/TrEMBL
  ENSCAFT00030038901.1 UniProtKB/TrEMBL
  ENSCAFT00030038940.1 UniProtKB/TrEMBL
  ENSCAFT00040031816.1 UniProtKB/TrEMBL
  ENSCAFT00040031856.1 UniProtKB/TrEMBL
  ENSCAFT00040031926.1 UniProtKB/TrEMBL
  ENSCAFT00845054111 ENTREZGENE
  ENSCAFT00845054111.1 UniProtKB/TrEMBL
  ENSCAFT00845054118.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.120.360 UniProtKB/TrEMBL
  2.60.40.150 UniProtKB/TrEMBL
InterPro Aida_C UniProtKB/TrEMBL
  AIDA_N UniProtKB/TrEMBL
  AIDA_N_sf UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/TrEMBL
KEGG Report cfa:607802 UniProtKB/TrEMBL
NCBI Gene AIDA ENTREZGENE
PANTHER AXIN INTERACTOR, DORSALIZATION-ASSOCIATED PROTEIN UniProtKB/TrEMBL
  AXIN INTERACTOR, DORSALIZATION-ASSOCIATED PROTEIN UniProtKB/TrEMBL
Pfam Aida_C2 UniProtKB/TrEMBL
  Aida_N UniProtKB/TrEMBL
PROSITE C2_AIDA UniProtKB/TrEMBL
Superfamily-SCOP SSF109779 UniProtKB/TrEMBL
UniProt A0A8C0P6L2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0QTU1 ENTREZGENE
  A0A8C0SW26 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SYU5_CANLF UniProtKB/TrEMBL
  A0A8I3Q3P5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3QAM0_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:37734 ENTREZGENE