RPS29 (ribosomal protein S29) - Rat Genome Database

Name: RPS29
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: RPS29 (ribosomal protein S29) Canis lupus familiaris

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Symbol:

RPS29

Name:

ribosomal protein S29

Description:

PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia (ortholog); Diamond-Blackfan Anemia 13 (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Also known as:

40S ribosomal protein S29

Orthologs:

Homo sapiens (human) : RPS29 (ribosomal protein S29) HGNC Alliance
Mus musculus (house mouse) : Rps29 (ribosomal protein S29) MGI Alliance
Rattus norvegicus (Norway rat) : Rps29 (ribosomal protein S29) Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rps29 (ribosomal protein S29)
Pan paniscus (bonobo/pygmy chimpanzee) : RPS29 (ribosomal protein S29)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rps29 (ribosomal protein S29)
Sus scrofa (pig) : RPS29 (ribosomal protein S29)

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	26,221,546 - 26,223,580 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog Cytomap	8		NCBI

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Model

Annotation (Toggle Annotation Detail/Summary View)

Disease Annotations

Molecular Pathway Annotations

Genomics

Comparative Map Data

RPS29
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	26,221,546 - 26,223,580 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog Cytomap	8		NCBI

RPS29
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	49,570,988 - 49,598,710 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	14	50,043,390 - 50,053,134 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	49,113,789 - 49,122,844 (-)	NCBI	NCBI36		hg18	NCBI36
Build 34	14	49,120,052 - 49,122,844	NCBI
Celera	14	29,903,866 - 29,912,921 (-)	NCBI
Cytogenetic Map	14	q21.3	NCBI
HuRef	14	30,160,698 - 30,170,443 (-)	NCBI		HuRef
CHM1_1	14	49,982,406 - 49,992,150 (-)	NCBI		CHM1_1

Rps29
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm38	12	69,157,722 - 69,159,186 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
MGSCv37	12	70,258,709 - 70,260,173 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	12	70,076,330 - 70,077,675 (-)	NCBI			mm8
Celera	12	70,249,756 - 70,251,220 (-)	NCBI		Celera
Cytogenetic Map	12	C2	NCBI

Rps29
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	6	91,455,333 - 91,456,709 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	147,490,496 - 147,490,666 (-)	Ensembl
Rnor_6.0 Ensembl	6	91,455,333 - 91,456,696 (-)	Ensembl
Rnor_6.0 Ensembl	7	76,980,040 - 76,980,210 (+)	Ensembl
Rnor_5.0	6	100,914,106 - 100,915,482 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	91,115,709 - 91,117,085 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	6	91,119,164 - 91,120,541 (-)	NCBI
Celera	6	86,134,478 - 86,135,854 (-)	NCBI		Celera
Cytogenetic Map	6	q24	NCBI

Rps29
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955409	13,056,022 - 13,057,530 (+)	NCBI	ChiLan1.0	ChiLan1.0

RPS29
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	14	48,459,215 - 48,474,644 (-)	NCBI	panpan1.1	PanPan1.1
Bonobo Cytomap	14		NCBI

Rps29
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936583	426,476 - 428,008 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RPS29
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	1	179,454,923 - 179,456,847 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	199,694,881 - 199,696,780 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Pig Cytomap	1		NCBI

Expression

Sequence

Nucleotide Sequences

Protein Sequences

Additional Information

External Database Links

More on RPS29
	NCBI Gene
	Ensembl Gene
	NCBI Genome Data Viewer

RGD Object Information
RGD ID:	12280076
Created:	2017-01-24
Species:	Canis lupus familiaris
Last Modified:	2019-11-26
Status:	ACTIVE

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Annotations - ClinVar

Imported Annotations - MGI

Imported Annotations - OMIM

RGD Manual Annotations