OFD1 (OFD1 centriole and centriolar satellite protein) - Rat Genome Database

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Gene: OFD1 (OFD1 centriole and centriolar satellite protein) Canis lupus familiaris
Analyze
Symbol: OFD1
Name: OFD1 centriole and centriolar satellite protein
RGD ID: 12275308
Description: ENCODES a protein that exhibits alpha-tubulin binding (ortholog); gamma-tubulin binding (ortholog); INVOLVED IN axoneme assembly (ortholog); centriole replication (ortholog); cilium assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog); CAKUT (ortholog); fundus dystrophy (ortholog); FOUND IN centriolar satellite (ortholog); cilium (ortholog); microtubule cytoskeleton (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X10,140,439 - 10,194,478 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX10,140,067 - 10,194,472 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX10,114,679 - 10,168,786 (+)NCBI
ROS_Cfam_1.0X10,098,262 - 10,152,653 (+)NCBI
UMICH_Zoey_3.1X10,166,885 - 10,220,990 (+)NCBI
UNSW_CanFamBas_1.0X10,158,225 - 10,212,581 (+)NCBI
UU_Cfam_GSD_1.0X10,184,578 - 10,238,702 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
OFD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X10,140,439 - 10,194,478 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX10,140,067 - 10,194,472 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX10,114,679 - 10,168,786 (+)NCBI
ROS_Cfam_1.0X10,098,262 - 10,152,653 (+)NCBI
UMICH_Zoey_3.1X10,166,885 - 10,220,990 (+)NCBI
UNSW_CanFamBas_1.0X10,158,225 - 10,212,581 (+)NCBI
UU_Cfam_GSD_1.0X10,184,578 - 10,238,702 (+)NCBI
OFD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 EnsemblX13,734,745 - 13,769,357 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 EnsemblX13,734,743 - 13,777,955 (+)EnsemblGRCh38hg38GRCh38
GRCh38X13,734,726 - 13,773,978 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X13,752,867 - 13,787,476 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X13,662,801 - 13,697,393 (+)NCBINCBI36hg18NCBI36
Build 34X13,512,536 - 13,547,127NCBI
CeleraX17,869,913 - 17,904,562 (+)NCBI
Cytogenetic MapXp22.2NCBI
HuRefX11,510,937 - 11,544,940 (+)NCBIHuRef
CHM1_1X13,783,650 - 13,818,298 (+)NCBICHM1_1
Ofd1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X165,171,503 - 165,223,700 (-)NCBIGRCm39mm39
GRCm39 EnsemblX165,173,029 - 165,223,700 (-)Ensembl
GRCm38X166,386,573 - 166,440,704 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX166,390,033 - 166,440,704 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X162,827,965 - 162,878,636 (-)NCBIGRCm37mm9NCBIm37
MGSCv36X161,735,041 - 161,784,660 (-)NCBImm8
CeleraX149,569,705 - 149,620,495 (-)NCBICelera
Cytogenetic MapXF5NCBI
cM MapX77.28NCBI
Ofd1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X28,015,347 - 28,056,115 (+)NCBI
Rnor_6.0 EnsemblX29,562,165 - 29,602,925 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0X29,562,165 - 29,602,934 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X29,955,456 - 29,996,224 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X48,701,675 - 48,742,443 (+)NCBIRGSC3.4rn4RGSC3.4
CeleraX28,388,104 - 28,428,825 (+)NCBICelera
Cytogenetic MapXq13NCBI
Ofd1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555194,433,855 - 4,471,070 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555194,433,747 - 4,470,842 (-)NCBIChiLan1.0ChiLan1.0
OFD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1X13,630,006 - 13,669,285 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX13,611,304 - 13,664,512 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0X6,296,597 - 6,376,197 (+)NCBIMhudiblu_PPA_v0panPan3
Ofd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X3,292,935 - 3,331,915 (+)NCBI
SpeTri2.0NW_0049364703,292,961 - 3,331,915 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
OFD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1X10,361,403 - 10,415,502 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X11,314,606 - 11,369,244 (+)NCBISscrofa10.2Sscrofa10.2susScr3
OFD1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X12,222,396 - 12,256,802 (+)NCBI
ChlSab1.1 EnsemblX12,222,760 - 12,256,557 (+)Ensembl
Ofd1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624882376,447 - 417,066 (-)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 3 13 6 6 6 8 10 2
Low 2 5 9 6 6 6 6 4
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005641122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014111611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022416439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038449431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038449432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038449433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038449434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038464332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038464333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038522853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038586836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038586837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038586838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038586839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038586840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038586841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038651354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038651355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038651356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038651357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038651358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038651359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_537958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000018685   ⟹   ENSCAFP00000017310
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX10,140,067 - 10,194,472 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000018691   ⟹   ENSCAFP00000017316
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX10,140,067 - 10,194,472 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000064025   ⟹   ENSCAFP00000059196
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX10,140,067 - 10,193,107 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000067672   ⟹   ENSCAFP00000045286
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX10,140,067 - 10,193,107 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000074763   ⟹   ENSCAFP00000050294
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX10,140,067 - 10,193,107 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000086808   ⟹   ENSCAFP00000049541
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX10,140,067 - 10,194,472 (+)Ensembl
RefSeq Acc Id: XM_005641122   ⟹   XP_005641179
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X10,140,439 - 10,194,478 (+)NCBI
Dog10K_Boxer_TashaX10,114,679 - 10,168,786 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014111611   ⟹   XP_013967086
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X10,141,984 - 10,194,473 (+)NCBI
Dog10K_Boxer_TashaX10,116,503 - 10,168,781 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022416439   ⟹   XP_022272147
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X10,140,439 - 10,194,473 (+)NCBI
Dog10K_Boxer_TashaX10,114,679 - 10,168,781 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038449431   ⟹   XP_038305359
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X10,098,262 - 10,152,653 (+)NCBI
RefSeq Acc Id: XM_038449432   ⟹   XP_038305360
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X10,098,606 - 10,152,648 (+)NCBI
RefSeq Acc Id: XM_038449433   ⟹   XP_038305361
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X10,098,262 - 10,152,648 (+)NCBI
RefSeq Acc Id: XM_038449434   ⟹   XP_038305362
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X10,100,089 - 10,152,648 (+)NCBI
RefSeq Acc Id: XM_038464332   ⟹   XP_038320260
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_TashaX10,114,679 - 10,168,781 (+)NCBI
RefSeq Acc Id: XM_038464333   ⟹   XP_038320261
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_TashaX10,115,023 - 10,168,781 (+)NCBI
RefSeq Acc Id: XM_038522848   ⟹   XP_038378776
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X10,166,885 - 10,220,990 (+)NCBI
RefSeq Acc Id: XM_038522849   ⟹   XP_038378777
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X10,166,885 - 10,220,985 (+)NCBI
RefSeq Acc Id: XM_038522850   ⟹   XP_038378778
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X10,166,885 - 10,220,985 (+)NCBI
RefSeq Acc Id: XM_038522851   ⟹   XP_038378779
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X10,167,229 - 10,220,985 (+)NCBI
RefSeq Acc Id: XM_038522852   ⟹   XP_038378780
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X10,168,708 - 10,220,985 (+)NCBI
RefSeq Acc Id: XM_038522853   ⟹   XP_038378781
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X10,167,229 - 10,220,985 (+)NCBI
RefSeq Acc Id: XM_038586836   ⟹   XP_038442764
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X10,184,578 - 10,238,702 (+)NCBI
RefSeq Acc Id: XM_038586837   ⟹   XP_038442765
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X10,184,922 - 10,238,697 (+)NCBI
RefSeq Acc Id: XM_038586838   ⟹   XP_038442766
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X10,184,578 - 10,238,697 (+)NCBI
RefSeq Acc Id: XM_038586839   ⟹   XP_038442767
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X10,186,402 - 10,238,697 (+)NCBI
RefSeq Acc Id: XM_038586840   ⟹   XP_038442768
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X10,184,578 - 10,238,697 (+)NCBI
RefSeq Acc Id: XM_038586841   ⟹   XP_038442769
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X10,184,922 - 10,238,697 (+)NCBI
RefSeq Acc Id: XM_038651354   ⟹   XP_038507282
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X10,158,225 - 10,212,581 (+)NCBI
RefSeq Acc Id: XM_038651355   ⟹   XP_038507283
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X10,158,569 - 10,212,576 (+)NCBI
RefSeq Acc Id: XM_038651356   ⟹   XP_038507284
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X10,158,225 - 10,212,576 (+)NCBI
RefSeq Acc Id: XM_038651357   ⟹   XP_038507285
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X10,160,052 - 10,212,576 (+)NCBI
RefSeq Acc Id: XM_038651358   ⟹   XP_038507286
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X10,158,225 - 10,212,576 (+)NCBI
RefSeq Acc Id: XM_038651359   ⟹   XP_038507287
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X10,158,569 - 10,212,576 (+)NCBI
RefSeq Acc Id: XM_537958   ⟹   XP_537958
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X10,140,474 - 10,194,473 (+)NCBI
Dog10K_Boxer_TashaX10,115,023 - 10,168,781 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005641179 (Get FASTA)   NCBI Sequence Viewer  
  XP_013967086 (Get FASTA)   NCBI Sequence Viewer  
  XP_022272147 (Get FASTA)   NCBI Sequence Viewer  
  XP_038305359 (Get FASTA)   NCBI Sequence Viewer  
  XP_038305360 (Get FASTA)   NCBI Sequence Viewer  
  XP_038305361 (Get FASTA)   NCBI Sequence Viewer  
  XP_038305362 (Get FASTA)   NCBI Sequence Viewer  
  XP_038320260 (Get FASTA)   NCBI Sequence Viewer  
  XP_038320261 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378776 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378777 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378778 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378779 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378780 (Get FASTA)   NCBI Sequence Viewer  
  XP_038378781 (Get FASTA)   NCBI Sequence Viewer  
  XP_038442764 (Get FASTA)   NCBI Sequence Viewer  
  XP_038442765 (Get FASTA)   NCBI Sequence Viewer  
  XP_038442766 (Get FASTA)   NCBI Sequence Viewer  
  XP_038442767 (Get FASTA)   NCBI Sequence Viewer  
  XP_038442768 (Get FASTA)   NCBI Sequence Viewer  
  XP_038442769 (Get FASTA)   NCBI Sequence Viewer  
  XP_038507282 (Get FASTA)   NCBI Sequence Viewer  
  XP_038507283 (Get FASTA)   NCBI Sequence Viewer  
  XP_038507284 (Get FASTA)   NCBI Sequence Viewer  
  XP_038507285 (Get FASTA)   NCBI Sequence Viewer  
  XP_038507286 (Get FASTA)   NCBI Sequence Viewer  
  XP_038507287 (Get FASTA)   NCBI Sequence Viewer  
  XP_537958 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005641179   ⟸   XM_005641122
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_537958   ⟸   XM_537958
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013967086   ⟸   XM_014111611
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_022272147   ⟸   XM_022416439
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: ENSCAFP00000059196   ⟸   ENSCAFT00000064025
RefSeq Acc Id: ENSCAFP00000050294   ⟸   ENSCAFT00000074763
RefSeq Acc Id: ENSCAFP00000017310   ⟸   ENSCAFT00000018685
RefSeq Acc Id: ENSCAFP00000045286   ⟸   ENSCAFT00000067672
RefSeq Acc Id: ENSCAFP00000017316   ⟸   ENSCAFT00000018691
RefSeq Acc Id: ENSCAFP00000049541   ⟸   ENSCAFT00000086808
RefSeq Acc Id: XP_038378776   ⟸   XM_038522848
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038378777   ⟸   XM_038522849
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038378778   ⟸   XM_038522850
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038378779   ⟸   XM_038522851
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038378781   ⟸   XM_038522853
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038378780   ⟸   XM_038522852
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038507282   ⟸   XM_038651354
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038507284   ⟸   XM_038651356
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038507286   ⟸   XM_038651358
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038507283   ⟸   XM_038651355
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038507287   ⟸   XM_038651359
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038507285   ⟸   XM_038651357
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038305359   ⟸   XM_038449431
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038305361   ⟸   XM_038449433
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038305360   ⟸   XM_038449432
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038305362   ⟸   XM_038449434
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038320260   ⟸   XM_038464332
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038320261   ⟸   XM_038464333
- Peptide Label: isoform X13
RefSeq Acc Id: XP_038442764   ⟸   XM_038586836
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038442766   ⟸   XM_038586838
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038442768   ⟸   XM_038586840
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038442765   ⟸   XM_038586837
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038442769   ⟸   XM_038586841
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038442767   ⟸   XM_038586839
- Peptide Label: isoform X3
Protein Domains
LisH

Promoters
RGD ID:13689263
Promoter ID:EPDNEW_C7329
Type:single initiation site
Name:OFD1_1
Description:OFD1, centriole and centriolar satellite protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X10,140,272 - 10,140,332EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000011764 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCAFP00000017310 UniProtKB/TrEMBL
  ENSCAFP00000017316 UniProtKB/TrEMBL
  ENSCAFP00000045286 UniProtKB/TrEMBL
  ENSCAFP00000049541 UniProtKB/TrEMBL
  ENSCAFP00000050294 UniProtKB/TrEMBL
  ENSCAFP00000059196 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000018685 UniProtKB/TrEMBL
  ENSCAFT00000018691 UniProtKB/TrEMBL
  ENSCAFT00000064025 UniProtKB/TrEMBL
  ENSCAFT00000067672 UniProtKB/TrEMBL
  ENSCAFT00000074763 UniProtKB/TrEMBL
  ENSCAFT00000086808 UniProtKB/TrEMBL
InterPro LisH UniProtKB/TrEMBL
NCBI Gene OFD1 ENTREZGENE
Pfam LisH_2 UniProtKB/TrEMBL
PROSITE LISH UniProtKB/TrEMBL
SMART LisH UniProtKB/TrEMBL
UniProt A0A5F4BTW4_CANLF UniProtKB/TrEMBL
  A0A5F4C5P7_CANLF UniProtKB/TrEMBL
  A0A5F4C7V9_CANLF UniProtKB/TrEMBL
  A0A5F4CXY9_CANLF UniProtKB/TrEMBL
  F1P7K4_CANLF UniProtKB/TrEMBL
  F6XFW5_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:44103 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-04-16 OFD1  OFD1 centriole and centriolar satellite protein    OFD1, centriole and centriolar satellite protein  Symbol and/or name change 5135510 APPROVED