DCTN2 (dynactin subunit 2) - Rat Genome Database

Name: DCTN2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: DCTN2 (dynactin subunit 2) Canis lupus familiaris

Analyze

Symbol:

DCTN2

Name:

dynactin subunit 2

RGD ID:

12272725

Description:

ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); spectrin binding (ortholog); INVOLVED IN melanosome transport (ortholog); mitotic metaphase chromosome alignment (ortholog); protein localization to centrosome (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease axonal type 2U (ortholog); familial melanoma (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); dynactin complex (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DCTN2 (dynactin subunit 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Dctn2 (dynactin 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Dctn2 (dynactin subunit 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Dctn2 (dynactin subunit 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DCTN2 (dynactin subunit 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Dctn2 (dynactin subunit 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DCTN2 (dynactin subunit 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DCTN2 (dynactin subunit 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Dctn2 (dynactin subunit 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	1,620,702 - 1,634,385 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	1,620,724 - 1,634,309 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	1,683,865 - 1,697,555 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	1,629,967 - 1,643,711 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	1,630,053 - 1,643,684 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	1,607,705 - 1,621,392 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	1,849,593 - 1,863,307 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	1,974,591 - 1,988,304 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Charcot-Marie-Tooth disease (ISO)

Charcot-Marie-Tooth disease axonal type 2U (ISO)

familial melanoma (ISO)

genetic disease (ISO)

INTERSTITIAL LUNG AND LIVER DISEASE (ISO)

paraplegia (ISO)

synucleinopathy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

melanosome transport (ISO)

microtubule-based process (IEA)

mitotic metaphase chromosome alignment (ISO)

mitotic spindle organization (IEA)

protein localization to centrosome (ISO)

Cellular Component

centrosome (IEA,ISO)

cytoplasm (IEA)

cytosol (ISO)

dynactin complex (IEA,ISO)

dynein complex (IEA)

growth cone (ISO)

kinetochore (ISO)

vesicle (ISO)

Molecular Function

identical protein binding (ISO)

protein binding (ISO)

protein kinase binding (ISO)

spectrin binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

mitochondria transport pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

DCTN2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	1,620,702 - 1,634,385 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	1,620,724 - 1,634,309 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	1,683,865 - 1,697,555 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	1,629,967 - 1,643,711 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	1,630,053 - 1,643,684 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	1,607,705 - 1,621,392 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	1,849,593 - 1,863,307 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	1,974,591 - 1,988,304 (-)	NCBI		UU_Cfam_GSD_1.0

DCTN2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	57,530,051 - 57,547,192 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	57,529,633 - 57,547,224 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	57,923,834 - 57,940,975 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	56,210,361 - 56,227,245 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	56,210,360 - 56,227,245	NCBI
Celera	12	57,579,926 - 57,596,808 (-)	NCBI		Celera
Cytogenetic Map	12	q13.3	NCBI
HuRef	12	54,961,731 - 54,979,012 (-)	NCBI		HuRef
CHM1_1	12	57,891,658 - 57,908,952 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	57,498,291 - 57,515,431 (-)	NCBI		T2T-CHM13v2.0

Dctn2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	127,102,131 - 127,117,828 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	127,102,237 - 127,117,819 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	127,266,262 - 127,281,959 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	127,266,368 - 127,281,950 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	126,703,318 - 126,719,015 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	126,669,348 - 126,684,756 (+)	NCBI		MGSCv36	mm8
Celera	10	129,658,775 - 129,674,400 (+)	NCBI		Celera
Cytogenetic Map	10	D3	NCBI
cM Map	10	74.5	NCBI

Dctn2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	64,977,338 - 64,992,875 (+)	NCBI		GRCr8
mRatBN7.2	7	63,092,061 - 63,107,560 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	63,092,057 - 63,108,543 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	64,981,425 - 64,996,689 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	67,183,845 - 67,199,109 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	66,985,182 - 67,000,460 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	70,555,953 - 70,571,433 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	70,556,019 - 70,572,614 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	70,730,089 - 70,745,583 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	67,223,893 - 67,239,157 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	67,244,622 - 67,259,886 (+)	NCBI
Celera	7	60,232,682 - 60,247,954 (+)	NCBI		Celera
Cytogenetic Map	7	q22	NCBI

Dctn2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955458	5,247,871 - 5,265,242 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955458	5,247,871 - 5,264,424 (-)	NCBI	ChiLan1.0	ChiLan1.0

DCTN2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	36,793,760 - 36,810,798 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	36,790,531 - 36,807,569 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	31,379,531 - 31,396,570 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	31,638,272 - 31,655,458 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	31,636,884 - 31,655,458 (+)	Ensembl	panpan1.1		panPan2

Dctn2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	57,175,175 - 57,191,709 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936646	1,678,678 - 1,695,142 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936646	1,678,678 - 1,695,142 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DCTN2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	22,799,287 - 22,814,362 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	22,799,286 - 22,814,358 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

DCTN2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	53,438,878 - 53,456,181 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	53,439,249 - 53,456,267 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	192,507,976 - 192,525,286 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dctn2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624802	10,412,466 - 10,429,354 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in DCTN2
96 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	5	5	22	6	6	6	6	6	12	8	10	6
Low
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005625545	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022424096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038487891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038487892	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038487893	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038549785	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038549786	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038549787	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038613747	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038613748	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038613749	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038633520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038679107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038679108	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038679109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_844581	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_853979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000097	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000358	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000000369 ⟹ ENSCAFP00000000335

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	10	1,620,724 - 1,634,309 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000061579 ⟹ ENSCAFP00000049802

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	10	1,620,724 - 1,634,309 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000093117 ⟹ ENSCAFP00000044176

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	10	1,620,724 - 1,634,309 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845021801 ⟹ ENSCAFP00845017149

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	10	1,630,053 - 1,643,684 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845021827 ⟹ ENSCAFP00845017167

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	10	1,630,053 - 1,643,684 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845021852 ⟹ ENSCAFP00845017188

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	10	1,630,053 - 1,643,684 (-)	Ensembl

RefSeq Acc Id:

XM_005625545 ⟹ XP_005625602

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	10	1,620,702 - 1,634,384 (-)	NCBI
Dog10K_Boxer_Tasha	10	1,683,865 - 1,697,554 (-)	NCBI

Sequence:

show sequence

CCTGTGCGACTCCTGTCGCGAGACTTCCTGCTCCTCCGCCTCCTCCGCCGCTCCCTTTGCCGCC
GCCTTAGCCCGGGACTCGGACCCAGCCTCTCCCCTACCCGAACACCGGCCCCGGCTCCACCGAG
GCCCCGGTCCCCCAACCCCGCCTCGCCGCCGCCATGGCGGACCCCAAATACGCCGACCTTCCCG
GCATTGCCAGGAACGAGCCAGATGTTTATGAAACCAGCGACCTACCTGAAGATGATCAAGCAGA
GTTTGATGCGGAGCTGGAGGAGCTGACGAGCACAAGTGTGGAGCACATCATTGTCAATCCCAAT
GCTGCCTATGACAAGTTCAAAGACAAGAGAGTGGGGACAAAGGGACTTGATTTCTCAGATCGTA
TTGGAAAAACCAAGAGAACAGGATATGAATCTGGAGAATATGAGATGCTTGGAGAGGGTCTAGG
AGTGAAGGAGACACCCCAGCAAAAGTACCAGCGACTACTGCATGAGGTCCAAGAGCTGACAACT
GAAGTTGAGAAAATCAAGACATCGGTGAAGGAGTCAGCCACTGAAGAGAAGCTGACCCCAGTGG
TTTTGGCTAAGCAGCTGGCAGCCTTGAAGCAGCAGCTGGTTGCTTCCCACCTGGAGAAGCTGCT
GGGACCAGATGCAGCTATCAACCTTACTGACCCTGATGGAGCTCTGGCTAAGCGCCTGCTGCTG
CAGCTGGAAGCAACAAAAAACAGCAAAGGAACTGGTTCAGGGGGAAAGACCACCGGTGGGACTC
CCGTAGATAGTAACCTTGTCACTTACGAACTACATTCTCGGCCTGAACAGGACAAGTTCTCTCA
AGCTGCCAAAGTTGCAGAACTTGAGAAGCGCCTGACAGAGCTGGAAGCCACTGTACGCTGTGAT
CAGGACGCTCAGAATCCCCTTTCAGCAGGTCTACAGGGAGCCTGTCTTATGGAGACTGTAGAAC
TGTTGCAAGCAAAGGTGAACGCCCTGGACCTCGCAGTTCTGGACCAAGTGGAGGCTCGGCTACA
GAGTGTCCTGGGCAAGGTGAACGAGATTGCCAAGCATAAAGCTTCTGTAGAGGATGCAGATACA
CAAAGCAAGGTGCACCAGCTCTATGAAACCATACAGCGCTGGAGCCCCATCGCCTCCACCCTGC
CTGAGCTGGTGCAGAGACTTGTCACCATCAAGCAGCTGCATGAGCAAGCCATGCAGTTCGGTCA
GCTCCTGACACACTTGGATACCACACAGCAGATGATTGCTAGCTCCCTCAAGGACAACACCGCC
CTCCTGACCCAGGTGCAGACAACCATGCGTGAGAACCTGTCCACAATTGAGGGGAATTTTGCCA
ACATTGATGAGCGGATGAAGCAGCTGGGAAAGTGAGCACCTTTAGGAGATGGAGAACAGGGGTA
ATCCCTGCCCCTTTGAACTCTGTTAACAGCTTACATAGGGCTCCCCCTTCATTATAACTCTCGC
ACCCCCATCCCATTTGACACTGGGGTCAAGGGGTTCTTCTTGCATGTGGGGTTTACACCCCTCC
TCCGACGAATACAGAGTGGTAGCTGGGGGACTTTAGATGGTGGTCTCCCCTCAGGCCCTGGGGA
CGTGGGCCCAGCCACAGGGCAGCTCCTGTCCAGTACTGCTTTGCCTGGGGTGGGGAAGGACTGG
GTCCTGTCCTCCAGCACAGCTCCTGTGGCTGGATGTACTACTGTACAACTGTTTCTGACCATTA
AATGCTGTTGTACTCTG

hide sequence

RefSeq Acc Id:

XM_038487891 ⟹ XP_038343819

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	10	1,607,705 - 1,621,391 (-)	NCBI

RefSeq Acc Id:

XM_038487892 ⟹ XP_038343820

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	10	1,607,705 - 1,621,392 (-)	NCBI

RefSeq Acc Id:

XM_038487893 ⟹ XP_038343821

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	10	1,607,705 - 1,621,391 (-)	NCBI

RefSeq Acc Id:

XM_038549785 ⟹ XP_038405713

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	10	1,974,591 - 1,988,303 (-)	NCBI

RefSeq Acc Id:

XM_038549786 ⟹ XP_038405714

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	10	1,974,591 - 1,988,304 (-)	NCBI

RefSeq Acc Id:

XM_038549787 ⟹ XP_038405715

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	10	1,974,591 - 1,988,302 (-)	NCBI

RefSeq Acc Id:

XM_038613747 ⟹ XP_038469675

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	10	1,849,593 - 1,863,307 (-)	NCBI

RefSeq Acc Id:

XM_038613748 ⟹ XP_038469676

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	10	1,849,593 - 1,863,307 (-)	NCBI

RefSeq Acc Id:

XM_038613749 ⟹ XP_038469677

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	10	1,849,593 - 1,863,306 (-)	NCBI

RefSeq Acc Id:

XM_038633520 ⟹ XP_038489448

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	10	1,683,865 - 1,697,555 (-)	NCBI

RefSeq Acc Id:

XM_038679107 ⟹ XP_038535035

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	10	1,629,967 - 1,643,710 (-)	NCBI

RefSeq Acc Id:

XM_038679108 ⟹ XP_038535036

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	10	1,629,967 - 1,643,711 (-)	NCBI

RefSeq Acc Id:

XM_038679109 ⟹ XP_038535037

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	10	1,629,967 - 1,643,709 (-)	NCBI

RefSeq Acc Id:

XM_853979 ⟹ XP_859072

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	10	1,620,702 - 1,634,383 (-)	NCBI
Dog10K_Boxer_Tasha	10	1,683,865 - 1,697,554 (-)	NCBI

Sequence:

show sequence

CTGTGCGACTCCTGTCGCGAGACTTCCTGCTCCTCCGCCTCCTCCGCCGCTCCCTTTGCCGCCG
CCTTAGCCCGGGACTCGGACCCAGCCTCTCCCCTACCCGAACACCGGCCCCGGCTCCACCGAGG
CCCCGGTCCCCCAACCCCGCCTCGCCGCCGCCATGGCGGACCCCAAATACGCCGACCTTCCCGG
CATTGCCAGGAACGAGCCAGATGTTTATGAAACCAGCGACCTACCTGAAGATGATCAAGCAGAG
TTTGATGCGGAGGAGCTGACGAGCACAAGTGTGGAGCACATCATTGTCAATCCCAATGCTGCCT
ATGACAAGTTCAAAGACAAGAGAGTGGGGACAAAGGGACTTGATTTCTCAGATCGTATTGGAAA
AACCAAGAGAACAGGATATGAATCTGGAGAATATGAGATGCTTGGAGAGGGTCTAGGAGTGAAG
GAGACACCCCAGCAAAAGTACCAGCGACTACTGCATGAGGTCCAAGAGCTGACAACTGAAGTTG
AGAAAATCAAGACATCGGTGAAGGAGTCAGCCACTGAAGAGAAGCTGACCCCAGTGGTTTTGGC
TAAGCAGCTGGCAGCCTTGAAGCAGCAGCTGGTTGCTTCCCACCTGGAGAAGCTGCTGGGACCA
GATGCAGCTATCAACCTTACTGACCCTGATGGAGCTCTGGCTAAGCGCCTGCTGCTGCAGCTGG
AAGCAACAAAAAACAGCAAAGGAACTGGTTCAGGGGGAAAGACCACCGGTGGGACTCCCGTAGA
TAGTAACCTTGTCACTTACGAACTACATTCTCGGCCTGAACAGGACAAGTTCTCTCAAGCTGCC
AAAGTTGCAGAACTTGAGAAGCGCCTGACAGAGCTGGAAGCCACTGTACGCTGTGATCAGGACG
CTCAGAATCCCCTTTCAGCAGGTCTACAGGGAGCCTGTCTTATGGAGACTGTAGAACTGTTGCA
AGCAAAGGTGAACGCCCTGGACCTCGCAGTTCTGGACCAAGTGGAGGCTCGGCTACAGAGTGTC
CTGGGCAAGGTGAACGAGATTGCCAAGCATAAAGCTTCTGTAGAGGATGCAGATACACAAAGCA
AGGTGCACCAGCTCTATGAAACCATACAGCGCTGGAGCCCCATCGCCTCCACCCTGCCTGAGCT
GGTGCAGAGACTTGTCACCATCAAGCAGCTGCATGAGCAAGCCATGCAGTTCGGTCAGCTCCTG
ACACACTTGGATACCACACAGCAGATGATTGCTAGCTCCCTCAAGGACAACACCGCCCTCCTGA
CCCAGGTGCAGACAACCATGCGTGAGAACCTGTCCACAATTGAGGGGAATTTTGCCAACATTGA
TGAGCGGATGAAGCAGCTGGGAAAGTGAGCACCTTTAGGAGATGGAGAACAGGGGTAATCCCTG
CCCCTTTGAACTCTGTTAACAGCTTACATAGGGCTCCCCCTTCATTATAACTCTCGCACCCCCA
TCCCATTTGACACTGGGGTCAAGGGGTTCTTCTTGCATGTGGGGTTTACACCCCTCCTCCGACG
AATACAGAGTGGTAGCTGGGGGACTTTAGATGGTGGTCTCCCCTCAGGCCCTGGGGACGTGGGC
CCAGCCACAGGGCAGCTCCTGTCCAGTACTGCTTTGCCTGGGGTGGGGAAGGACTGGGTCCTGT
CCTCCAGCACAGCTCCTGTGGCTGGATGTACTACTGTACAACTGTTTCTGACCATTAAATGCTG
TTGTACTCTG

hide sequence

Protein Sequences


Protein RefSeqs	XP_005625602	(Get FASTA)	NCBI Sequence Viewer
	XP_038343819	(Get FASTA)	NCBI Sequence Viewer
	XP_038343820	(Get FASTA)	NCBI Sequence Viewer
	XP_038343821	(Get FASTA)	NCBI Sequence Viewer
	XP_038405713	(Get FASTA)	NCBI Sequence Viewer
	XP_038405714	(Get FASTA)	NCBI Sequence Viewer
	XP_038405715	(Get FASTA)	NCBI Sequence Viewer
	XP_038469675	(Get FASTA)	NCBI Sequence Viewer
	XP_038469676	(Get FASTA)	NCBI Sequence Viewer
	XP_038469677	(Get FASTA)	NCBI Sequence Viewer
	XP_038489448	(Get FASTA)	NCBI Sequence Viewer
	XP_038535035	(Get FASTA)	NCBI Sequence Viewer
	XP_038535036	(Get FASTA)	NCBI Sequence Viewer
	XP_038535037	(Get FASTA)	NCBI Sequence Viewer
	XP_859072	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000000335.3
	ENSCAFP00000044176.1
	ENSCAFP00000049802.1
	ENSCAFP00030012017.1
	ENSCAFP00030012048.1
	ENSCAFP00030012087.1
	ENSCAFP00040023744.1
	ENSCAFP00040023807.1
	ENSCAFP00040023857.1
	ENSCAFP00845017149.1
	ENSCAFP00845017167
	ENSCAFP00845017167.1
	ENSCAFP00845017188
	ENSCAFP00845017188.1

RefSeq Acc Id:	XP_859072 ⟸ XM_853979
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0MVC7 (UniProtKB/TrEMBL), A0A8I3RWZ8 (UniProtKB/TrEMBL), A0A8C0MPB4 (UniProtKB/TrEMBL), A0A8I3NX29 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADPKYADLPGIARNEPDVYETSDLPEDDQAEFDAEELTSTSVEHIIVNPNAAYDKFKDKRVGT KGLDFSDRIGKTKRTGYESGEYEMLGEGLGVKETPQQKYQRLLHEVQELTTEVEKIKTSVKESA TEEKLTPVVLAKQLAALKQQLVASHLEKLLGPDAAINLTDPDGALAKRLLLQLEATKNSKGTGS GGKTTGGTPVDSNLVTYELHSRPEQDKFSQAAKVAELEKRLTELEATVRCDQDAQNPLSAGLQG ACLMETVELLQAKVNALDLAVLDQVEARLQSVLGKVNEIAKHKASVEDADTQSKVHQLYETIQR WSPIASTLPELVQRLVTIKQLHEQAMQFGQLLTHLDTTQQMIASSLKDNTALLTQVQTTMRENL STIEGNFANIDERMKQLGK hide sequence

RefSeq Acc Id:	XP_005625602 ⟸ XM_005625545
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0SNF5 (UniProtKB/TrEMBL), A0A8I3NKR5 (UniProtKB/TrEMBL), A0A8C0MPB4 (UniProtKB/TrEMBL), A0A8I3NX29 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADPKYADLPGIARNEPDVYETSDLPEDDQAEFDAELEELTSTSVEHIIVNPNAAYDKFKDKRV GTKGLDFSDRIGKTKRTGYESGEYEMLGEGLGVKETPQQKYQRLLHEVQELTTEVEKIKTSVKE SATEEKLTPVVLAKQLAALKQQLVASHLEKLLGPDAAINLTDPDGALAKRLLLQLEATKNSKGT GSGGKTTGGTPVDSNLVTYELHSRPEQDKFSQAAKVAELEKRLTELEATVRCDQDAQNPLSAGL QGACLMETVELLQAKVNALDLAVLDQVEARLQSVLGKVNEIAKHKASVEDADTQSKVHQLYETI QRWSPIASTLPELVQRLVTIKQLHEQAMQFGQLLTHLDTTQQMIASSLKDNTALLTQVQTTMRE NLSTIEGNFANIDERMKQLGK hide sequence

RefSeq Acc Id:

ENSCAFP00000000335 ⟸ ENSCAFT00000000369

RefSeq Acc Id:

ENSCAFP00000044176 ⟸ ENSCAFT00000093117

RefSeq Acc Id:

ENSCAFP00000049802 ⟸ ENSCAFT00000061579

RefSeq Acc Id:	XP_038343820 ⟸ XM_038487892
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038343821 ⟸ XM_038487893
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038343819 ⟸ XM_038487891
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038469676 ⟸ XM_038613748
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038469675 ⟸ XM_038613747
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038469677 ⟸ XM_038613749
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038535036 ⟸ XM_038679108
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0MPB4 (UniProtKB/TrEMBL), A0A8I3NX29 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038535035 ⟸ XM_038679107
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0SNF5 (UniProtKB/TrEMBL), A0A8I3NKR5 (UniProtKB/TrEMBL), A0A8C0MPB4 (UniProtKB/TrEMBL), A0A8I3NX29 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038535037 ⟸ XM_038679109
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0MVC7 (UniProtKB/TrEMBL), A0A8I3RWZ8 (UniProtKB/TrEMBL), A0A8C0MPB4 (UniProtKB/TrEMBL), A0A8I3NX29 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038489448 ⟸ XM_038633520
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0MPB4 (UniProtKB/TrEMBL), A0A8I3NX29 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038405714 ⟸ XM_038549786
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0MPB4 (UniProtKB/TrEMBL), A0A8I3NX29 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038405713 ⟸ XM_038549785
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MPB4 (UniProtKB/TrEMBL), A0A8C0SNF5 (UniProtKB/TrEMBL), A0A8I3NKR5 (UniProtKB/TrEMBL), A0A8I3NX29 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038405715 ⟸ XM_038549787
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0MPB4 (UniProtKB/TrEMBL), A0A8C0MVC7 (UniProtKB/TrEMBL), A0A8I3NX29 (UniProtKB/TrEMBL), A0A8I3RWZ8 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845017149 ⟸ ENSCAFT00845021801

RefSeq Acc Id:

ENSCAFP00845017188 ⟸ ENSCAFT00845021852

RefSeq Acc Id:

ENSCAFP00845017167 ⟸ ENSCAFT00845021827

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000000233	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030007450	UniProtKB/TrEMBL
	ENSCAFG00040014802	UniProtKB/TrEMBL
	ENSCAFG00845012256	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000000369.5	UniProtKB/TrEMBL
	ENSCAFT00000061579.2	UniProtKB/TrEMBL
	ENSCAFT00000093117.2	UniProtKB/TrEMBL
	ENSCAFT00030013767.1	UniProtKB/TrEMBL
	ENSCAFT00030013806.1	UniProtKB/TrEMBL
	ENSCAFT00030013846.1	UniProtKB/TrEMBL
	ENSCAFT00040027322.1	UniProtKB/TrEMBL
	ENSCAFT00040027396.1	UniProtKB/TrEMBL
	ENSCAFT00040027462.1	UniProtKB/TrEMBL
	ENSCAFT00845021801.1	UniProtKB/TrEMBL
	ENSCAFT00845021827	ENTREZGENE
	ENSCAFT00845021827.1	UniProtKB/TrEMBL
	ENSCAFT00845021852	ENTREZGENE
	ENSCAFT00845021852.1	UniProtKB/TrEMBL
InterPro	Dynamitin	UniProtKB/TrEMBL
KEGG Report	cfa:474415	UniProtKB/TrEMBL
NCBI Gene	DCTN2	ENTREZGENE
PANTHER	DYNACTIN SUBUNIT 2	UniProtKB/TrEMBL
	PTHR15346	UniProtKB/TrEMBL
Pfam	Dynamitin	UniProtKB/TrEMBL
UniProt	A0A8C0MPB4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0MVC7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0SNF5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NKR5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NX29	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3RWZ8	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:39817	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

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Imported Disease Annotations - ClinVar

RGD Manual Annotations