ATMIN (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 5 | 70,779,676 - 70,795,829 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 5 | 70,782,853 - 70,795,888 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 5 | 70,728,614 - 70,744,741 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 5 | 71,084,025 - 71,100,838 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 5 | 71,086,034 - 71,100,940 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 5 | 71,026,491 - 71,043,285 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 5 | 70,861,713 - 70,878,528 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 5 | 71,339,240 - 71,356,057 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
ATMIN (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 16 | 81,035,842 - 81,047,350 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 16 | 81,035,842 - 81,047,350 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 16 | 81,069,447 - 81,080,955 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 16 | 79,626,959 - 79,638,452 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 16 | 65,367,853 - 65,379,348 (+) | NCBI | | Celera | | | Cytogenetic Map | 16 | q23.2 | NCBI | | | | | HuRef | 16 | 66,826,345 - 66,837,755 (+) | NCBI | | HuRef | | | CHM1_1 | 16 | 82,480,826 - 82,492,320 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 16 | 87,097,372 - 87,108,882 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Atmin (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 8 | 117,670,132 - 117,687,184 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 117,670,132 - 117,687,184 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 116,943,383 - 116,960,445 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 116,943,393 - 116,960,445 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 119,467,293 - 119,484,345 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 119,829,385 - 119,846,422 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 121,162,779 - 121,179,840 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | E1 | NCBI | | | | | cM Map | 8 | 63.37 | NCBI | | | | |
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Atmin (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 19 | 61,905,343 - 61,922,443 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 19 | 44,996,506 - 45,013,606 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 19 | 44,996,356 - 45,013,605 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 19 | 51,806,281 - 51,823,383 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 19 | 52,459,296 - 52,476,398 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 19 | 54,703,537 - 54,720,643 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 19 | 49,482,482 - 49,499,682 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_5.0 | 19 | 60,273,787 - 60,290,987 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 19 | 47,054,050 - 47,071,395 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 7 | 71,090,419 - 71,092,881 (-) | NCBI | | | | | Celera | 19 | 44,269,716 - 44,286,805 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | q12 | NCBI | | | | |
|
Atmin (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955522 | 3,829,865 - 3,835,449 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955522 | 3,829,875 - 3,835,449 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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ATMIN (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 18 | 90,788,124 - 90,797,462 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 16 | 96,707,583 - 96,719,096 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 16 | 61,642,394 - 61,653,921 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 16 | 81,075,807 - 81,081,641 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
|
Atmin (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | X | 56,872,492 - 57,019,573 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936475 | 28,711,984 - 28,719,281 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936547 | 3,192,904 - 3,339,985 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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ATMIN (Sus scrofa - pig) |
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ATMIN (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 5 | 66,492,443 - 66,503,813 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 5 | 66,492,599 - 66,503,908 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666047 | 9,331,660 - 9,343,059 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Atmin (Heterocephalus glaber - naked mole-rat) |
|