SLC16A14 (solute carrier family 16 member 14) - Rat Genome Database

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Gene: SLC16A14 (solute carrier family 16 member 14) Canis lupus familiaris
Analyze
Symbol: SLC16A14
Name: solute carrier family 16 member 14
RGD ID: 12270625
Description: ENCODES a protein that exhibits monocarboxylic acid transmembrane transporter activity (inferred); transmembrane transporter activity (inferred); INVOLVED IN transmembrane transport (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: monocarboxylate transporter 14; solute carrier family 16, member 14 (monocarboxylic acid transporter 14)
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12542,316,294 - 42,373,862 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2542,318,457 - 42,354,370 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2542,941,535 - 42,972,390 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02542,572,552 - 42,603,488 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2542,572,554 - 42,603,761 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12542,502,842 - 42,533,655 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02542,344,506 - 42,375,280 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02542,499,740 - 42,530,578 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
SLC16A14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12542,316,294 - 42,373,862 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2542,318,457 - 42,354,370 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2542,941,535 - 42,972,390 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02542,572,552 - 42,603,488 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2542,572,554 - 42,603,761 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12542,502,842 - 42,533,655 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02542,344,506 - 42,375,280 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02542,499,740 - 42,530,578 (-)NCBIUU_Cfam_GSD_1.0
SLC16A14
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382230,034,982 - 230,068,924 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2230,034,982 - 230,068,993 (-)EnsemblGRCh38hg38GRCh38
GRCh372230,899,698 - 230,933,640 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362230,607,942 - 230,641,863 (-)NCBINCBI36Build 36hg18NCBI36
Build 342230,725,204 - 230,759,124NCBI
Celera2224,675,617 - 224,709,637 (-)NCBICelera
Cytogenetic Map2q36.3NCBI
HuRef2222,739,435 - 222,773,253 (-)NCBIHuRef
CHM1_12230,905,955 - 230,939,983 (-)NCBICHM1_1
T2T-CHM13v2.02230,517,639 - 230,551,553 (-)NCBIT2T-CHM13v2.0
Slc16a14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39184,881,344 - 84,912,927 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl184,883,619 - 84,912,855 (-)EnsemblGRCm39 Ensembl
GRCm38184,905,488 - 84,935,281 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl184,905,898 - 84,935,134 (-)EnsemblGRCm38mm10GRCm38
MGSCv37184,903,280 - 84,931,658 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36184,785,730 - 84,814,108 (-)NCBIMGSCv36mm8
Celera184,966,975 - 84,995,452 (-)NCBICelera
Cytogenetic Map1C5NCBI
cM Map143.43NCBI
Slc16a14
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8993,558,144 - 93,585,396 (-)NCBIGRCr8
mRatBN7.2986,110,066 - 86,137,546 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl986,112,894 - 86,137,318 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx994,526,927 - 94,554,181 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0999,655,421 - 99,682,679 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0998,038,816 - 98,066,050 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0992,503,602 - 92,531,163 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl992,503,597 - 92,530,938 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0992,234,657 - 92,262,771 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4984,170,601 - 84,195,055 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1984,354,585 - 84,372,280 (-)NCBI
Celera983,536,267 - 83,560,596 (-)NCBICelera
Cytogenetic Map9q35NCBI
Slc16a14
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554535,017,347 - 5,044,259 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554535,011,638 - 5,044,259 (+)NCBIChiLan1.0ChiLan1.0
SLC16A14
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213132,661,964 - 132,695,610 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B132,676,931 - 132,710,577 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B117,287,105 - 117,320,771 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B236,089,949 - 236,123,451 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B236,089,949 - 236,123,451 (-)Ensemblpanpan1.1panPan2
Slc16a14
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303184,496,691 - 184,526,011 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365256,413,583 - 6,443,568 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365256,413,606 - 6,443,004 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC16A14
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15131,026,230 - 131,080,893 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115131,042,367 - 131,080,931 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215144,741,376 - 144,770,756 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC16A14
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110116,059,296 - 116,092,297 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10116,061,700 - 116,088,548 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604083,356,732 - 83,391,379 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc16a14
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248433,794,531 - 3,819,184 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248433,793,309 - 3,825,153 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SLC16A14
864 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 8 4 4 3 6 9
Low 5 14 2 6 2 3 6 8 1 6
Below cutoff 5 6

Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00000016955   ⟹   ENSCAFP00000015684
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2542,318,457 - 42,354,370 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000064603   ⟹   ENSCAFP00000050606
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2542,318,457 - 42,339,941 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845035370   ⟹   ENSCAFP00845027688
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2542,572,554 - 42,603,761 (-)Ensembl
RefSeq Acc Id: XM_038435688   ⟹   XP_038291616
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02542,572,552 - 42,603,488 (-)NCBI
RefSeq Acc Id: XM_038510619   ⟹   XP_038366547
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12542,502,842 - 42,533,655 (-)NCBI
RefSeq Acc Id: XM_038574090   ⟹   XP_038430018
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02542,499,740 - 42,530,578 (-)NCBI
RefSeq Acc Id: XM_038638395   ⟹   XP_038494323
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02542,344,506 - 42,375,280 (-)NCBI
RefSeq Acc Id: XM_543280   ⟹   XP_543280
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12542,316,294 - 42,347,074 (-)NCBI
Dog10K_Boxer_Tasha2542,941,535 - 42,972,390 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_543280   ⟸   XM_543280
- UniProtKB: A0A8C0KE07 (UniProtKB/TrEMBL),   A0A8C0P0W4 (UniProtKB/TrEMBL),   A0A8P0SFT8 (UniProtKB/TrEMBL),   A0A8C0TLV5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000050606   ⟸   ENSCAFT00000064603
RefSeq Acc Id: ENSCAFP00000015684   ⟸   ENSCAFT00000016955
RefSeq Acc Id: XP_038366547   ⟸   XM_038510619
RefSeq Acc Id: XP_038494323   ⟸   XM_038638395
RefSeq Acc Id: XP_038291616   ⟸   XM_038435688
- UniProtKB: A0A8I3P207 (UniProtKB/TrEMBL),   A0A8C0TLV5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038430018   ⟸   XM_038574090
- UniProtKB: A0A8C0KE07 (UniProtKB/TrEMBL),   A0A8C0P0W4 (UniProtKB/TrEMBL),   A0A8C0TLV5 (UniProtKB/TrEMBL),   A0A8P0SFT8 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845027688   ⟸   ENSCAFT00845035370
Protein Domains
Major facilitator superfamily (MFS) profile

Promoters
RGD ID:13687812
Promoter ID:EPDNEW_C5881
Type:initiation region
Name:SLC16A14_1
Description:solute carrier family 16 member 14
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12542,347,160 - 42,347,220EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000010665 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030021733 UniProtKB/TrEMBL
  ENSCAFG00040023031 UniProtKB/TrEMBL
  ENSCAFG00845020077 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000016955.5 UniProtKB/TrEMBL
  ENSCAFT00030039834.1 UniProtKB/TrEMBL
  ENSCAFT00040042820.1 UniProtKB/TrEMBL
  ENSCAFT00845035370 ENTREZGENE
  ENSCAFT00845035370.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1250.20 UniProtKB/TrEMBL
InterPro MFS UniProtKB/TrEMBL
  MFS_dom UniProtKB/TrEMBL
  MFS_trans_sf UniProtKB/TrEMBL
KEGG Report cfa:486154 UniProtKB/TrEMBL
NCBI Gene SLC16A14 ENTREZGENE
PANTHER MONOCARBOXYLATE TRANSPORTER UniProtKB/TrEMBL
  MONOCARBOXYLATE TRANSPORTER 14 UniProtKB/TrEMBL
Pfam MFS_1 UniProtKB/TrEMBL
PROSITE MFS UniProtKB/TrEMBL
Superfamily-SCOP SSF103473 UniProtKB/TrEMBL
UniProt A0A8C0KE07 ENTREZGENE
  A0A8C0P0W4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TLV5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3P207 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SFT8 ENTREZGENE
UniProt Secondary A0A8P0SFT8 UniProtKB/TrEMBL
VGNC ID VGNC:46240 ENTREZGENE