GPR149 (G protein-coupled receptor 149) - Rat Genome Database

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Gene: GPR149 (G protein-coupled receptor 149) Canis lupus familiaris
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Symbol: GPR149
Name: G protein-coupled receptor 149
RGD ID: 12270383
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); INVOLVED IN antral ovarian follicle growth (ortholog); negative regulation of ovulation (ortholog); preantral ovarian follicle growth (ortholog); ASSOCIATED WITH hypertrophic cardiomyopathy (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: probable G-protein coupled receptor 149
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12348,470,428 - 48,535,861 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2348,471,701 - 48,535,195 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2348,336,897 - 48,402,512 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02349,100,098 - 49,165,816 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2349,101,331 - 49,165,830 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12348,680,893 - 48,746,295 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02348,736,831 - 48,802,227 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02349,019,460 - 49,085,316 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
GPR149
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12348,470,428 - 48,535,861 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2348,471,701 - 48,535,195 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2348,336,897 - 48,402,512 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02349,100,098 - 49,165,816 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2349,101,331 - 49,165,830 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12348,680,893 - 48,746,295 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02348,736,831 - 48,802,227 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02349,019,460 - 49,085,316 (-)NCBIUU_Cfam_GSD_1.0
GPR149
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383154,334,943 - 154,430,190 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3154,334,943 - 154,430,190 (-)EnsemblGRCh38hg38GRCh38
GRCh373154,052,732 - 154,147,979 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363155,538,155 - 155,630,198 (-)NCBINCBI36Build 36hg18NCBI36
Celera3152,476,120 - 152,567,869 (-)NCBICelera
Cytogenetic Map3q25.2NCBI
HuRef3151,450,408 - 151,542,196 (-)NCBIHuRef
CHM1_13154,018,600 - 154,110,520 (-)NCBICHM1_1
T2T-CHM13v2.03157,109,201 - 157,204,151 (-)NCBIT2T-CHM13v2.0
Gpr149
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39362,436,851 - 62,512,861 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl362,436,498 - 62,512,561 (-)EnsemblGRCm39 Ensembl
GRCm38362,529,430 - 62,605,440 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl362,529,077 - 62,605,140 (-)EnsemblGRCm38mm10GRCm38
MGSCv37362,333,885 - 62,409,062 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36362,617,892 - 62,693,069 (-)NCBIMGSCv36mm8
Celera362,201,246 - 62,278,479 (-)NCBICelera
Cytogenetic Map3E1NCBI
cM Map329.97NCBI
Gpr149
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82149,059,333 - 149,130,798 (-)NCBIGRCr8
mRatBN7.22146,909,710 - 146,981,924 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2146,909,713 - 146,981,167 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2153,589,486 - 153,651,712 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02151,691,340 - 151,752,751 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02146,323,718 - 146,385,139 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02152,838,836 - 152,912,027 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2152,839,117 - 152,911,553 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02172,297,848 - 172,307,498 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.02172,232,553 - 172,234,225 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42152,176,361 - 152,257,898 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12152,126,326 - 152,207,861 (-)NCBI
Celera2141,248,693 - 141,308,009 (-)NCBICelera
Cytogenetic Map2q31NCBI
Gpr149
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554485,685,168 - 5,749,467 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554485,682,132 - 5,749,533 (-)NCBIChiLan1.0ChiLan1.0
GPR149
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22152,251,687 - 152,352,510 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13152,256,419 - 152,357,242 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03151,393,049 - 151,493,824 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13158,946,398 - 159,045,996 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3158,949,110 - 159,046,551 (-)Ensemblpanpan1.1panPan2
Gpr149
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560287,663,724 - 87,740,772 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365191,998,086 - 2,070,481 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365191,997,492 - 2,070,157 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPR149
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1394,356,434 - 94,419,184 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11394,356,371 - 94,419,917 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213102,497,964 - 102,524,933 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GPR149
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11536,286,777 - 36,376,765 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1536,287,701 - 36,374,008 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660418,946,424 - 9,039,320 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gpr149
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473031,921,426 - 31,998,801 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473031,921,433 - 31,999,075 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in GPR149
763 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
5 5 3 22 17 11 1 6 1 5 22 16 12 14 10

Sequence


Ensembl Acc Id: ENSCAFT00000013790   ⟹   ENSCAFP00000012753
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2348,471,701 - 48,535,195 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845036774   ⟹   ENSCAFP00845028793
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2349,101,331 - 49,165,830 (-)Ensembl
RefSeq Acc Id: XM_038432721   ⟹   XP_038288649
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02349,100,098 - 49,165,816 (-)NCBI
RefSeq Acc Id: XM_038508025   ⟹   XP_038363953
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12348,680,893 - 48,746,295 (-)NCBI
RefSeq Acc Id: XM_038571267   ⟹   XP_038427195
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02349,019,460 - 49,085,316 (-)NCBI
RefSeq Acc Id: XM_038635462   ⟹   XP_038491390
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02348,736,831 - 48,802,227 (-)NCBI
RefSeq Acc Id: XM_534312   ⟹   XP_534312
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12348,470,428 - 48,535,861 (-)NCBI
Dog10K_Boxer_Tasha2348,336,897 - 48,402,512 (-)NCBI
Sequence:
RefSeq Acc Id: XP_534312   ⟸   XM_534312
- UniProtKB: A0A8C0JYZ9 (UniProtKB/TrEMBL),   A0A8C0N7T5 (UniProtKB/TrEMBL),   A0A8I3PEW2 (UniProtKB/TrEMBL),   A0A8C0N531 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000012753   ⟸   ENSCAFT00000013790
RefSeq Acc Id: XP_038363953   ⟸   XM_038508025
RefSeq Acc Id: XP_038491390   ⟸   XM_038635462
RefSeq Acc Id: XP_038288649   ⟸   XM_038432721
- UniProtKB: A0A8C0JYZ9 (UniProtKB/TrEMBL),   A0A8C0N7T5 (UniProtKB/TrEMBL),   A0A8I3PEW2 (UniProtKB/TrEMBL),   A0A8C0N531 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038427195   ⟸   XM_038571267
- UniProtKB: A0A8C0JYZ9 (UniProtKB/TrEMBL),   A0A8C0N531 (UniProtKB/TrEMBL),   A0A8C0N7T5 (UniProtKB/TrEMBL),   A0A8I3PEW2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845028793   ⟸   ENSCAFT00845036774


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000008688 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030013293 UniProtKB/TrEMBL
  ENSCAFG00845020850 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000013790.5 UniProtKB/TrEMBL
  ENSCAFT00030024629.1 UniProtKB/TrEMBL
  ENSCAFT00030024679.1 UniProtKB/TrEMBL
  ENSCAFT00845036774 ENTREZGENE
  ENSCAFT00845036774.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
KEGG Report cfa:477119 UniProtKB/TrEMBL
NCBI Gene GPR149 ENTREZGENE
PANTHER G-PROTEIN COUPLED RECEPTOR 149-RELATED UniProtKB/TrEMBL
  NEUROPEPTIDES RECEPTOR UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8C0JYZ9 ENTREZGENE
  A0A8C0N531 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0N7T5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PEW2 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:41403 ENTREZGENE