RAD51B (RAD51 paralog B) - Rat Genome Database

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Gene: RAD51B (RAD51 paralog B) Canis lupus familiaris
Analyze
Symbol: RAD51B
Name: RAD51 paralog B
RGD ID: 12264952
Description: ENCODES a protein that exhibits four-way junction DNA binding (ortholog); INVOLVED IN blastocyst growth (ortholog); in utero embryonic development (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH Breast Neoplasms (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN Rad51B-Rad51C-Rad51D-XRCC2 complex (inferred); replication fork (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: DNA repair protein RAD51 homolog 2; RAD51 homolog B; RAD51-like 1; RAD51L1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1841,779,435 - 42,357,362 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl841,778,714 - 42,357,298 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha841,469,217 - 42,151,951 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0842,009,371 - 42,691,934 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl842,009,155 - 42,586,658 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1841,624,025 - 42,306,963 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0841,699,024 - 42,381,539 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0842,056,861 - 42,740,806 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
RAD51B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1841,779,435 - 42,357,362 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl841,778,714 - 42,357,298 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha841,469,217 - 42,151,951 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0842,009,371 - 42,691,934 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl842,009,155 - 42,586,658 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1841,624,025 - 42,306,963 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0841,699,024 - 42,381,539 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0842,056,861 - 42,740,806 (+)NCBIUU_Cfam_GSD_1.0
RAD51B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381467,819,779 - 68,683,096 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1467,819,779 - 68,730,218 (+)EnsemblGRCh38hg38GRCh38
GRCh371468,286,496 - 69,149,813 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361467,356,262 - 68,132,367 (+)NCBINCBI36Build 36hg18NCBI36
Build 341467,356,261 - 68,014,562NCBI
Celera1448,345,516 - 49,121,494 (+)NCBICelera
Cytogenetic Map14q24.1NCBI
HuRef1448,455,813 - 49,231,230 (+)NCBIHuRef
CHM1_11468,225,211 - 69,001,135 (+)NCBICHM1_1
T2T-CHM13v2.01462,026,883 - 62,889,971 (+)NCBIT2T-CHM13v2.0
Rad51b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391279,344,032 - 79,895,034 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1279,344,056 - 79,861,464 (+)EnsemblGRCm39 Ensembl
GRCm381279,297,282 - 79,848,260 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1279,297,282 - 79,814,690 (+)EnsemblGRCm38mm10GRCm38
MGSCv371280,398,269 - 80,915,677 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361280,216,122 - 80,733,530 (+)NCBIMGSCv36mm8
Celera1280,761,261 - 81,278,996 (+)NCBICelera
Cytogenetic Map12C3NCBI
cM Map1235.51NCBI
Rad51b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86103,829,390 - 104,373,923 (+)NCBIGRCr8
mRatBN7.2698,096,525 - 98,640,988 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl698,098,868 - 98,640,979 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx698,525,988 - 99,062,959 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0698,825,134 - 99,362,047 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0698,211,622 - 98,750,469 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06102,473,978 - 103,018,185 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6102,477,036 - 102,512,505 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06115,160,014 - 115,699,112 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46102,069,799 - 102,134,176 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera696,481,576 - 97,009,269 (+)NCBICelera
Cytogenetic Map6q24NCBI
Rad51b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554662,137,192 - 2,381,450 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554661,686,472 - 2,388,146 (-)NCBIChiLan1.0ChiLan1.0
RAD51B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21568,926,972 - 69,844,939 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11468,145,747 - 69,061,558 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01448,399,345 - 49,314,577 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11467,277,400 - 68,189,780 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1467,281,148 - 68,110,693 (+)Ensemblpanpan1.1panPan2
Rad51b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864062,431,048 - 62,999,072 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649511,195,767 - 11,467,458 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649511,185,560 - 11,762,254 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RAD51B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl791,592,424 - 92,345,294 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1791,592,413 - 92,301,383 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2797,899,832 - 98,613,557 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RAD51B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12445,056,485 - 45,704,394 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605333,285,609 - 34,057,636 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rad51b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473432,560,579 - 33,173,357 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in RAD51B
4047 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium
Low 5 5 22 6 6 6 6 6 12 8 10 6
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005623564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005623565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022422159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022422160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022422161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038545046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038589716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038589734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038589739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038589745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002629256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005329560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005329561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005329562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005329563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005329564 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005363449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005363450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005363451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005363452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005363453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005387527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005387532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005387533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005387535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005397900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005397901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005397902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005397903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005397904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005431148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005431149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005431150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005431151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005431152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000026122   ⟹   ENSCAFP00000024255
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl841,778,714 - 42,009,193 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000079492   ⟹   ENSCAFP00000058465
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl841,779,570 - 41,788,706 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000089351   ⟹   ENSCAFP00000056881
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl841,778,714 - 42,357,298 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845006500   ⟹   ENSCAFP00845005172
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl842,009,155 - 42,018,620 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845006517   ⟹   ENSCAFP00845005187
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl842,010,744 - 42,586,658 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845006523   ⟹   ENSCAFP00845005193
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl842,010,744 - 42,238,599 (+)Ensembl
RefSeq Acc Id: XM_005623564   ⟹   XP_005623621
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1841,779,454 - 42,351,270 (+)NCBI
Dog10K_Boxer_Tasha841,470,355 - 42,041,039 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005623565   ⟹   XP_005623622
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1841,779,457 - 42,357,362 (+)NCBI
Dog10K_Boxer_Tasha841,470,355 - 42,047,150 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022422160   ⟹   XP_022277868
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1841,779,454 - 42,049,314 (+)NCBI
Dog10K_Boxer_Tasha841,470,355 - 41,738,681 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038483571   ⟹   XP_038339499
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1841,625,161 - 42,306,963 (+)NCBI
RefSeq Acc Id: XM_038483572   ⟹   XP_038339500
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1841,625,161 - 42,195,986 (+)NCBI
RefSeq Acc Id: XM_038483573   ⟹   XP_038339501
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1841,625,161 - 42,202,098 (+)NCBI
RefSeq Acc Id: XM_038483574   ⟹   XP_038339502
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1841,625,144 - 42,306,963 (+)NCBI
RefSeq Acc Id: XM_038483575   ⟹   XP_038339503
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1841,624,025 - 42,306,963 (+)NCBI
RefSeq Acc Id: XM_038483576   ⟹   XP_038339504
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1841,625,161 - 41,893,181 (+)NCBI
RefSeq Acc Id: XM_038483577   ⟹   XP_038339505
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1841,633,255 - 42,306,963 (+)NCBI
RefSeq Acc Id: XM_038545040   ⟹   XP_038400968
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0842,057,999 - 42,740,806 (+)NCBI
RefSeq Acc Id: XM_038545041   ⟹   XP_038400969
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0842,057,999 - 42,629,882 (+)NCBI
RefSeq Acc Id: XM_038545042   ⟹   XP_038400970
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0842,057,999 - 42,635,993 (+)NCBI
RefSeq Acc Id: XM_038545043   ⟹   XP_038400971
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0842,057,982 - 42,740,806 (+)NCBI
RefSeq Acc Id: XM_038545044   ⟹   XP_038400972
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0842,056,861 - 42,740,806 (+)NCBI
RefSeq Acc Id: XM_038545045   ⟹   XP_038400973
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0842,057,999 - 42,327,502 (+)NCBI
RefSeq Acc Id: XM_038545046   ⟹   XP_038400974
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0842,066,112 - 42,740,806 (+)NCBI
RefSeq Acc Id: XM_038589716   ⟹   XP_038445644
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha841,470,355 - 42,151,951 (+)NCBI
RefSeq Acc Id: XM_038589734   ⟹   XP_038445662
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha841,470,338 - 42,151,951 (+)NCBI
RefSeq Acc Id: XM_038589739   ⟹   XP_038445667
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha841,469,217 - 42,151,951 (+)NCBI
RefSeq Acc Id: XM_038589745   ⟹   XP_038445673
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha841,478,476 - 42,151,951 (+)NCBI
RefSeq Acc Id: XM_038609149   ⟹   XP_038465077
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0841,699,041 - 42,381,539 (+)NCBI
RefSeq Acc Id: XM_038609150   ⟹   XP_038465078
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0841,699,041 - 42,270,424 (+)NCBI
RefSeq Acc Id: XM_038609151   ⟹   XP_038465079
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0841,699,041 - 42,276,536 (+)NCBI
RefSeq Acc Id: XM_038609152   ⟹   XP_038465080
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0841,699,024 - 42,381,539 (+)NCBI
RefSeq Acc Id: XM_038609153   ⟹   XP_038465081
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0841,699,041 - 41,968,077 (+)NCBI
RefSeq Acc Id: XM_038609154   ⟹   XP_038465082
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0841,707,154 - 42,381,539 (+)NCBI
RefSeq Acc Id: XM_038673962   ⟹   XP_038529890
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0842,009,388 - 42,691,934 (+)NCBI
RefSeq Acc Id: XM_038673963   ⟹   XP_038529891
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0842,009,388 - 42,580,618 (+)NCBI
RefSeq Acc Id: XM_038673964   ⟹   XP_038529892
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0842,009,388 - 42,586,722 (+)NCBI
RefSeq Acc Id: XM_038673965   ⟹   XP_038529893
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0842,009,371 - 42,691,934 (+)NCBI
RefSeq Acc Id: XM_038673966   ⟹   XP_038529894
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0842,009,388 - 42,278,421 (+)NCBI
RefSeq Acc Id: XM_038673967   ⟹   XP_038529895
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0842,017,500 - 42,691,934 (+)NCBI
RefSeq Acc Id: XR_002629256
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1841,779,454 - 42,347,038 (+)NCBI
Dog10K_Boxer_Tasha841,470,355 - 42,036,826 (+)NCBI
Sequence:
RefSeq Acc Id: XR_005329560
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1841,625,161 - 42,306,963 (+)NCBI
RefSeq Acc Id: XR_005329561
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1841,625,161 - 42,306,963 (+)NCBI
RefSeq Acc Id: XR_005329562
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1841,625,161 - 42,306,963 (+)NCBI
RefSeq Acc Id: XR_005329563
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1841,625,161 - 42,306,963 (+)NCBI
RefSeq Acc Id: XR_005329564
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1841,625,161 - 42,191,766 (+)NCBI
RefSeq Acc Id: XR_005363449
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0842,057,999 - 42,740,806 (+)NCBI
RefSeq Acc Id: XR_005363450
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0842,057,999 - 42,740,806 (+)NCBI
RefSeq Acc Id: XR_005363451
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0842,057,999 - 42,740,806 (+)NCBI
RefSeq Acc Id: XR_005363452
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0842,057,999 - 42,740,806 (+)NCBI
RefSeq Acc Id: XR_005363453
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0842,057,999 - 42,625,669 (+)NCBI
RefSeq Acc Id: XR_005387527
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha841,470,355 - 42,151,951 (+)NCBI
RefSeq Acc Id: XR_005387532
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha841,470,355 - 42,151,951 (+)NCBI
RefSeq Acc Id: XR_005387533
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha841,470,355 - 42,151,951 (+)NCBI
RefSeq Acc Id: XR_005387535
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha841,470,355 - 42,151,951 (+)NCBI
RefSeq Acc Id: XR_005397900
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0841,699,041 - 42,381,539 (+)NCBI
RefSeq Acc Id: XR_005397901
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0841,699,041 - 42,381,539 (+)NCBI
RefSeq Acc Id: XR_005397902
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0841,699,041 - 42,381,539 (+)NCBI
RefSeq Acc Id: XR_005397903
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0841,699,041 - 42,381,539 (+)NCBI
RefSeq Acc Id: XR_005397904
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0841,699,041 - 42,266,207 (+)NCBI
RefSeq Acc Id: XR_005431148
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0842,009,388 - 42,691,934 (+)NCBI
RefSeq Acc Id: XR_005431149
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0842,009,388 - 42,691,934 (+)NCBI
RefSeq Acc Id: XR_005431150
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0842,009,388 - 42,691,934 (+)NCBI
RefSeq Acc Id: XR_005431151
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0842,009,388 - 42,691,934 (+)NCBI
RefSeq Acc Id: XR_005431152
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0842,009,388 - 42,576,404 (+)NCBI
Protein Sequences
Protein RefSeqs XP_005623621 (Get FASTA)   NCBI Sequence Viewer  
  XP_005623622 (Get FASTA)   NCBI Sequence Viewer  
  XP_022277868 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339499 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339500 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339501 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339502 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339503 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339504 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339505 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400968 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400969 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400970 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400971 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400972 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400973 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400974 (Get FASTA)   NCBI Sequence Viewer  
  XP_038445644 (Get FASTA)   NCBI Sequence Viewer  
  XP_038445662 (Get FASTA)   NCBI Sequence Viewer  
  XP_038445667 (Get FASTA)   NCBI Sequence Viewer  
  XP_038445673 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465077 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465078 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465079 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465080 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465081 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465082 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529890 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529891 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529892 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529893 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529894 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529895 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000024255.4
  ENSCAFP00000056881.1
  ENSCAFP00000058465.1
  ENSCAFP00030024896.1
  ENSCAFP00030024913.1
  ENSCAFP00040020708.1
  ENSCAFP00845005172.1
  ENSCAFP00845005187
  ENSCAFP00845005187.1
  ENSCAFP00845005193.1
RefSeq Acc Id: XP_005623622   ⟸   XM_005623565
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SHB1 (UniProtKB/TrEMBL),   A0A8I3N661 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005623621   ⟸   XM_005623564
- Peptide Label: isoform X2
- UniProtKB: A0A8C0SHB1 (UniProtKB/TrEMBL),   A0A8I3N661 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022277868   ⟸   XM_022422160
- Peptide Label: isoform X5
- UniProtKB: A0A8C0JWW3 (UniProtKB/TrEMBL),   A0A8C0NH10 (UniProtKB/TrEMBL),   A0A8I3MR66 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000058465   ⟸   ENSCAFT00000079492
RefSeq Acc Id: ENSCAFP00000056881   ⟸   ENSCAFT00000089351
RefSeq Acc Id: ENSCAFP00000024255   ⟸   ENSCAFT00000026122
RefSeq Acc Id: XP_038339503   ⟸   XM_038483575
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038339502   ⟸   XM_038483574
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038339499   ⟸   XM_038483571
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038339501   ⟸   XM_038483573
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038339500   ⟸   XM_038483572
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038339504   ⟸   XM_038483576
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038339505   ⟸   XM_038483577
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038465080   ⟸   XM_038609152
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038465077   ⟸   XM_038609149
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038465079   ⟸   XM_038609151
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038465078   ⟸   XM_038609150
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038465081   ⟸   XM_038609153
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038465082   ⟸   XM_038609154
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038529893   ⟸   XM_038673965
- Peptide Label: isoform X4
- UniProtKB: A0A8C0SHB1 (UniProtKB/TrEMBL),   A0A8I3N661 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038529890   ⟸   XM_038673962
- Peptide Label: isoform X1
- UniProtKB: A0A8C0SHB1 (UniProtKB/TrEMBL),   A0A8I3N661 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038529892   ⟸   XM_038673964
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SHB1 (UniProtKB/TrEMBL),   A0A8I3N661 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038529891   ⟸   XM_038673963
- Peptide Label: isoform X2
- UniProtKB: A0A8C0SHB1 (UniProtKB/TrEMBL),   A0A8I3N661 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038529894   ⟸   XM_038673966
- Peptide Label: isoform X5
- UniProtKB: A0A8C0JWW3 (UniProtKB/TrEMBL),   A0A8C0NH10 (UniProtKB/TrEMBL),   A0A8I3MR66 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038529895   ⟸   XM_038673967
- Peptide Label: isoform X6
- UniProtKB: A0A8C0SHB1 (UniProtKB/TrEMBL),   A0A8I3N661 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038445667   ⟸   XM_038589739
- Peptide Label: isoform X4
- UniProtKB: A0A8C0SHB1 (UniProtKB/TrEMBL),   A0A8I3N661 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038445662   ⟸   XM_038589734
- Peptide Label: isoform X4
- UniProtKB: A0A8C0SHB1 (UniProtKB/TrEMBL),   A0A8I3N661 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038445644   ⟸   XM_038589716
- Peptide Label: isoform X1
- UniProtKB: A0A8C0SHB1 (UniProtKB/TrEMBL),   A0A8I3N661 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038445673   ⟸   XM_038589745
- Peptide Label: isoform X6
- UniProtKB: A0A8C0SHB1 (UniProtKB/TrEMBL),   A0A8I3N661 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038400972   ⟸   XM_038545044
- Peptide Label: isoform X4
- UniProtKB: A0A8C0SHB1 (UniProtKB/TrEMBL),   A0A8I3N661 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038400971   ⟸   XM_038545043
- Peptide Label: isoform X4
- UniProtKB: A0A8C0SHB1 (UniProtKB/TrEMBL),   A0A8I3N661 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038400968   ⟸   XM_038545040
- Peptide Label: isoform X1
- UniProtKB: A0A8C0SHB1 (UniProtKB/TrEMBL),   A0A8I3N661 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038400970   ⟸   XM_038545042
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SHB1 (UniProtKB/TrEMBL),   A0A8I3N661 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038400969   ⟸   XM_038545041
- Peptide Label: isoform X2
- UniProtKB: A0A8C0SHB1 (UniProtKB/TrEMBL),   A0A8I3N661 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038400973   ⟸   XM_038545045
- Peptide Label: isoform X5
- UniProtKB: A0A8C0JWW3 (UniProtKB/TrEMBL),   A0A8C0NH10 (UniProtKB/TrEMBL),   A0A8I3MR66 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038400974   ⟸   XM_038545046
- Peptide Label: isoform X6
- UniProtKB: A0A8C0SHB1 (UniProtKB/TrEMBL),   A0A8I3N661 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845005187   ⟸   ENSCAFT00845006517
RefSeq Acc Id: ENSCAFP00845005193   ⟸   ENSCAFT00845006523
RefSeq Acc Id: ENSCAFP00845005172   ⟸   ENSCAFT00845006500
Protein Domains
RecA family profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000016485 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030015474 UniProtKB/TrEMBL
  ENSCAFG00040012917 UniProtKB/TrEMBL
  ENSCAFG00845003641 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000026122.5 UniProtKB/TrEMBL
  ENSCAFT00000079492.2 UniProtKB/TrEMBL
  ENSCAFT00000089351.2 UniProtKB/TrEMBL
  ENSCAFT00030028542.1 UniProtKB/TrEMBL
  ENSCAFT00030028565.1 UniProtKB/TrEMBL
  ENSCAFT00040023842.1 UniProtKB/TrEMBL
  ENSCAFT00845006500.1 UniProtKB/TrEMBL
  ENSCAFT00845006517 ENTREZGENE
  ENSCAFT00845006517.1 UniProtKB/TrEMBL
  ENSCAFT00845006523.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
InterPro AAA+_ATPase UniProtKB/TrEMBL
  DNA_recomb/repair_Rad51_C UniProtKB/TrEMBL
  DNA_recomb/repair_RecA-like UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  RAD51B UniProtKB/TrEMBL
  RecA_ATP-bd UniProtKB/TrEMBL
NCBI Gene RAD51B ENTREZGENE
PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 2 UniProtKB/TrEMBL
  PTHR46456 UniProtKB/TrEMBL
Pfam Rad51 UniProtKB/TrEMBL
PIRSF Rad51 UniProtKB/TrEMBL
PROSITE RECA_2 UniProtKB/TrEMBL
SMART AAA UniProtKB/TrEMBL
Superfamily-SCOP C-terminal domain of RNA polymerase alpha subunit UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
UniProt A0A8C0JWW3 ENTREZGENE
  A0A8C0NH10 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SHB1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MR66 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MRX3_CANLF UniProtKB/TrEMBL
  A0A8I3N661 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0TAF8_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:82294 ENTREZGENE