CHRNB4 (cholinergic receptor nicotinic beta 4 subunit) - Rat Genome Database

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Gene: CHRNB4 (cholinergic receptor nicotinic beta 4 subunit) Canis lupus familiaris
Analyze
Symbol: CHRNB4
Name: cholinergic receptor nicotinic beta 4 subunit
RGD ID: 12263516
Description: ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN behavioral response to nicotine (ortholog); locomotory behavior (ortholog); neuronal action potential (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Bloom syndrome (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cholinergic synapse (ortholog); postsynaptic specialization membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: basic proline-rich protein-like; LOC111098425; neuronal acetylcholine receptor subunit beta-4
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11338,312,537 - 38,327,242 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1338,312,173 - 38,328,341 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1338,273,110 - 38,288,065 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01338,786,382 - 38,801,494 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1338,786,222 - 38,800,419 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11338,477,587 - 38,492,683 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01338,586,959 - 38,602,041 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01339,061,951 - 39,077,068 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
CHRNB4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11338,312,537 - 38,327,242 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1338,312,173 - 38,328,341 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1338,273,110 - 38,288,065 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01338,786,382 - 38,801,494 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1338,786,222 - 38,800,419 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11338,477,587 - 38,492,683 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01338,586,959 - 38,602,041 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01339,061,951 - 39,077,068 (+)NCBIUU_Cfam_GSD_1.0
CHRNB4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381578,624,111 - 78,661,641 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1578,624,111 - 78,727,754 (-)EnsemblGRCh38hg38GRCh38
GRCh371578,916,453 - 78,933,552 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361576,703,691 - 76,720,642 (-)NCBINCBI36Build 36hg18NCBI36
Build 341576,703,690 - 76,720,642NCBI
Celera1555,852,898 - 55,869,734 (-)NCBICelera
Cytogenetic Map15q25.1NCBI
HuRef1555,674,500 - 55,691,566 (-)NCBIHuRef
CHM1_11579,035,191 - 79,052,089 (-)NCBICHM1_1
T2T-CHM13v2.01576,487,585 - 76,519,049 (-)NCBIT2T-CHM13v2.0
Chrnb4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39954,935,438 - 54,956,236 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl954,935,438 - 54,956,063 (-)EnsemblGRCm39 Ensembl
GRCm38955,028,154 - 55,048,953 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl955,028,154 - 55,048,779 (-)EnsemblGRCm38mm10GRCm38
MGSCv37954,875,963 - 54,896,351 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36954,826,293 - 54,846,681 (-)NCBIMGSCv36mm8
Celera952,271,558 - 52,291,872 (-)NCBICelera
Cytogenetic Map9BNCBI
cM Map929.84NCBI
Chrnb4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8864,312,644 - 64,333,319 (-)NCBIGRCr8
mRatBN7.2855,417,583 - 55,437,027 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl855,418,313 - 55,437,027 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx860,959,884 - 60,978,450 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0859,238,885 - 59,257,451 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0857,103,128 - 57,121,694 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0859,610,489 - 59,629,073 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl859,609,693 - 59,629,133 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0858,192,375 - 58,210,959 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4858,586,961 - 58,605,545 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1858,605,220 - 58,624,659 (-)NCBI
Celera854,902,516 - 54,921,100 (-)NCBICelera
RH 3.4 Map8614.4RGD
Cytogenetic Map8q24NCBI
Chrnb4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554501,013,607 - 1,030,282 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554501,013,897 - 1,030,232 (-)NCBIChiLan1.0ChiLan1.0
CHRNB4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21667,837,116 - 67,880,179 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11572,003,030 - 72,045,815 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01557,552,697 - 57,570,828 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11576,515,683 - 76,532,905 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1576,515,455 - 76,532,712 (-)Ensemblpanpan1.1panPan2
Chrnb4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640118,560,402 - 118,577,508 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647136,408,447 - 36,426,021 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647136,408,471 - 36,425,571 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CHRNB4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1747,338,819 - 47,359,064 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2752,808,908 - 52,829,172 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CHRNB4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1264,700,217 - 4,717,363 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl264,701,321 - 4,719,319 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666048137,078,808 - 137,095,082 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Chrnb4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248942,305,820 - 2,322,505 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248942,305,815 - 2,322,264 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CHRNB4
180 total Variants

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005628130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022426917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038493612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038493613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038493614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038555923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038555924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038555925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038619848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038619849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038619850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038685455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038685456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038685457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_847455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005298933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005298939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005335168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005335169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005368946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005368948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005403231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005403232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005436673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005436674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000002676   ⟹   ENSCAFP00000002484
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1338,312,372 - 38,327,241 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000060025   ⟹   ENSCAFP00000063391
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1338,312,173 - 38,328,341 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845022738   ⟹   ENSCAFP00845017830
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1338,786,222 - 38,800,419 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845022782   ⟹   ENSCAFP00845017862
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1338,786,222 - 38,800,419 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845022815   ⟹   ENSCAFP00845017889
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1338,786,222 - 38,798,688 (+)Ensembl
RefSeq Acc Id: XM_005628130   ⟹   XP_005628187
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11338,312,537 - 38,327,242 (+)NCBI
Dog10K_Boxer_Tasha1338,273,110 - 38,286,992 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022426917   ⟹   XP_022282625
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11338,312,537 - 38,327,242 (+)NCBI
Dog10K_Boxer_Tasha1338,273,110 - 38,286,992 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038493612   ⟹   XP_038349540
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11338,477,587 - 38,491,611 (+)NCBI
RefSeq Acc Id: XM_038493613   ⟹   XP_038349541
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11338,477,587 - 38,491,611 (+)NCBI
RefSeq Acc Id: XM_038493614   ⟹   XP_038349542
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11338,477,587 - 38,491,458 (+)NCBI
RefSeq Acc Id: XM_038555923   ⟹   XP_038411851
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01339,061,951 - 39,075,994 (+)NCBI
RefSeq Acc Id: XM_038555924   ⟹   XP_038411852
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01339,061,951 - 39,075,994 (+)NCBI
RefSeq Acc Id: XM_038555925   ⟹   XP_038411853
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01339,061,951 - 39,075,841 (+)NCBI
RefSeq Acc Id: XM_038619848   ⟹   XP_038475776
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01338,586,959 - 38,600,966 (+)NCBI
RefSeq Acc Id: XM_038619849   ⟹   XP_038475777
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01338,586,959 - 38,600,966 (+)NCBI
RefSeq Acc Id: XM_038619850   ⟹   XP_038475778
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01338,586,959 - 38,600,813 (+)NCBI
RefSeq Acc Id: XM_038685455   ⟹   XP_038541383
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01338,786,382 - 38,800,420 (+)NCBI
RefSeq Acc Id: XM_038685456   ⟹   XP_038541384
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01338,786,382 - 38,800,420 (+)NCBI
RefSeq Acc Id: XM_038685457   ⟹   XP_038541385
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01338,786,382 - 38,800,267 (+)NCBI
RefSeq Acc Id: XM_847455   ⟹   XP_852548
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11338,312,537 - 38,327,083 (+)NCBI
Dog10K_Boxer_Tasha1338,273,110 - 38,286,839 (+)NCBI
Sequence:
RefSeq Acc Id: XR_005298933
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1338,273,110 - 38,288,065 (+)NCBI
RefSeq Acc Id: XR_005298939
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1338,273,110 - 38,288,065 (+)NCBI
RefSeq Acc Id: XR_005335168
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11338,477,587 - 38,492,683 (+)NCBI
RefSeq Acc Id: XR_005335169
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11338,477,587 - 38,492,683 (+)NCBI
RefSeq Acc Id: XR_005368946
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01339,061,951 - 39,077,068 (+)NCBI
RefSeq Acc Id: XR_005368948
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01339,061,951 - 39,077,068 (+)NCBI
RefSeq Acc Id: XR_005403231
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01338,586,959 - 38,602,041 (+)NCBI
RefSeq Acc Id: XR_005403232
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01338,586,959 - 38,602,041 (+)NCBI
RefSeq Acc Id: XR_005436673
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01338,786,382 - 38,801,494 (+)NCBI
RefSeq Acc Id: XR_005436674
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01338,786,382 - 38,801,494 (+)NCBI
RefSeq Acc Id: XP_005628187   ⟸   XM_005628130
- Peptide Label: isoform X2
- UniProtKB: A0A8P0TEX7 (UniProtKB/TrEMBL),   A0A8C0MDQ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_852548   ⟸   XM_847455
- Peptide Label: isoform X3
- UniProtKB: A0A8C0L8L1 (UniProtKB/TrEMBL),   A0A8C0TE45 (UniProtKB/TrEMBL),   A0A8I3NCE4 (UniProtKB/TrEMBL),   A0A8C0MDQ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022282625   ⟸   XM_022426917
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RDY3 (UniProtKB/TrEMBL),   A0A8I3NMY9 (UniProtKB/TrEMBL),   A0A8C0MDM1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000063391   ⟸   ENSCAFT00000060025
Ensembl Acc Id: ENSCAFP00000002484   ⟸   ENSCAFT00000002676
RefSeq Acc Id: XP_038349540   ⟸   XM_038493612
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038349541   ⟸   XM_038493613
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038349542   ⟸   XM_038493614
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038475776   ⟸   XM_038619848
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038475777   ⟸   XM_038619849
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038475778   ⟸   XM_038619850
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038541383   ⟸   XM_038685455
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RDY3 (UniProtKB/TrEMBL),   A0A8I3NMY9 (UniProtKB/TrEMBL),   A0A8C0MDM1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038541384   ⟸   XM_038685456
- Peptide Label: isoform X2
- UniProtKB: A0A8P0TEX7 (UniProtKB/TrEMBL),   A0A8C0MDQ9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038541385   ⟸   XM_038685457
- Peptide Label: isoform X3
- UniProtKB: A0A8C0L8L1 (UniProtKB/TrEMBL),   A0A8C0TE45 (UniProtKB/TrEMBL),   A0A8I3NCE4 (UniProtKB/TrEMBL),   A0A8C0MDQ9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038411851   ⟸   XM_038555923
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MDM1 (UniProtKB/TrEMBL),   A0A8C0RDY3 (UniProtKB/TrEMBL),   A0A8I3NMY9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038411852   ⟸   XM_038555924
- Peptide Label: isoform X2
- UniProtKB: A0A8C0MDQ9 (UniProtKB/TrEMBL),   A0A8P0TEX7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038411853   ⟸   XM_038555925
- Peptide Label: isoform X3
- UniProtKB: A0A8C0L8L1 (UniProtKB/TrEMBL),   A0A8C0MDQ9 (UniProtKB/TrEMBL),   A0A8C0TE45 (UniProtKB/TrEMBL),   A0A8I3NCE4 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845017862   ⟸   ENSCAFT00845022782
Ensembl Acc Id: ENSCAFP00845017889   ⟸   ENSCAFT00845022815
Ensembl Acc Id: ENSCAFP00845017830   ⟸   ENSCAFT00845022738
Promoters
RGD ID:13685637
Promoter ID:EPDNEW_C3706
Type:single initiation site
Name:CHRNB4_1
Description:cholinergic receptor nicotinic beta 4 subunit
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11338,312,372 - 38,312,432EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000023904 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030006296 UniProtKB/TrEMBL
  ENSCAFG00040022120 UniProtKB/TrEMBL
  ENSCAFG00845012797 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000002676.5 UniProtKB/TrEMBL
  ENSCAFT00000060025.2 UniProtKB/TrEMBL
  ENSCAFT00000101214.1 UniProtKB/TrEMBL
  ENSCAFT00030011641.1 UniProtKB/TrEMBL
  ENSCAFT00030011696.1 UniProtKB/TrEMBL
  ENSCAFT00030011701.1 UniProtKB/TrEMBL
  ENSCAFT00040041043.1 UniProtKB/TrEMBL
  ENSCAFT00040041092.1 UniProtKB/TrEMBL
  ENSCAFT00040041127.1 UniProtKB/TrEMBL
  ENSCAFT00040041234.1 UniProtKB/TrEMBL
  ENSCAFT00845022738 ENTREZGENE
  ENSCAFT00845022738.1 UniProtKB/TrEMBL
  ENSCAFT00845022782 ENTREZGENE
  ENSCAFT00845022782.1 UniProtKB/TrEMBL
  ENSCAFT00845022815.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.58.390 UniProtKB/TrEMBL
  2.70.170.10 UniProtKB/TrEMBL
InterPro Neur_chan_lig-bd UniProtKB/TrEMBL
  Neur_chan_lig-bd_sf UniProtKB/TrEMBL
  Neur_channel UniProtKB/TrEMBL
  Neuro-gated_channel_TM_sf UniProtKB/TrEMBL
  Neuro_actylchol_rec UniProtKB/TrEMBL
  Neurotrans-gated_channel_TM UniProtKB/TrEMBL
  Neurotransmitter_ion_chnl_CS UniProtKB/TrEMBL
  Nicotinic_acetylcholine_rcpt UniProtKB/TrEMBL
KEGG Report cfa:482110 UniProtKB/TrEMBL
NCBI Gene CHRNB4 ENTREZGENE
PANTHER NEURONAL ACETYLCHOLINE RECEPTOR SUBUNIT BETA-4 UniProtKB/TrEMBL
  PTHR18945 UniProtKB/TrEMBL
Pfam Neur_chan_LBD UniProtKB/TrEMBL
  Neur_chan_memb UniProtKB/TrEMBL
PRINTS NICOTINICR UniProtKB/TrEMBL
  NRIONCHANNEL UniProtKB/TrEMBL
PROSITE NEUROTR_ION_CHANNEL UniProtKB/TrEMBL
Superfamily-SCOP SSF63712 UniProtKB/TrEMBL
  SSF90112 UniProtKB/TrEMBL
UniProt A0A8C0L8L1 ENTREZGENE
  A0A8C0MDM1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0MDQ9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RDY3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TE45 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TIG6_CANLF UniProtKB/TrEMBL
  A0A8I3NCE4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NMY9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NPV5_CANLF UniProtKB/TrEMBL
  A0A8P0TEX7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0TP45_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:39245 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-14 CHRNB4  cholinergic receptor nicotinic beta 4 subunit  LOC111098425  basic proline-rich protein-like  Data merged from RGD:13250865 737654 PROVISIONAL