IQCG (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 33 | 28,745,089 - 28,791,744 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 33 | 28,745,316 - 28,800,119 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 33 | 28,766,384 - 28,813,023 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 33 | 28,977,812 - 29,024,323 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 33 | 28,978,025 - 29,023,980 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 33 | 28,773,203 - 28,819,620 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 33 | 28,819,198 - 28,865,764 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 33 | 29,440,724 - 29,485,925 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
IQCG (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 3 | 197,889,077 - 197,960,177 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 197,889,077 - 197,960,142 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 197,615,948 - 197,686,862 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 199,100,345 - 199,171,271 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 199,104,258 - 199,175,184 | NCBI | | | | | Celera | 3 | 196,231,726 - 196,303,039 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q29 | NCBI | | | | | HuRef | 3 | 194,918,442 - 194,989,370 (-) | NCBI | | HuRef | | | CHM1_1 | 3 | 197,586,950 - 197,657,806 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 200,621,536 - 200,692,632 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Iqcg (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 16 | 32,834,640 - 32,876,617 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 16 | 32,833,053 - 32,876,588 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 16 | 33,014,270 - 33,057,145 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 16 | 33,012,683 - 33,056,218 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 16 | 33,014,356 - 33,056,272 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 16 | 32,935,132 - 32,975,917 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 16 | 33,494,273 - 33,535,599 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | B3 | NCBI | | | | | cM Map | 16 | 23.55 | NCBI | | | | |
|
Iqcg (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 11 | 81,235,204 - 81,276,249 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 11 | 67,730,117 - 67,771,170 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 11 | 67,730,247 - 67,771,168 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 11 | 76,567,300 - 76,608,237 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 11 | 69,229,111 - 69,270,032 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 11 | 68,256,388 - 68,297,328 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 11 | 70,967,228 - 71,007,708 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 11 | 70,967,223 - 71,105,403 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 11 | 74,052,210 - 74,092,614 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 11 | 69,553,215 - 69,591,042 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 11 | 69,610,803 - 69,648,631 (+) | NCBI | | | | | Celera | 11 | 67,176,940 - 67,215,675 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | q22 | NCBI | | | | |
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Iqcg (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955420 | 11,963,159 - 11,997,531 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955420 | 11,960,778 - 11,997,807 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
IQCG (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 2 | 195,814,110 - 195,892,007 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 195,821,916 - 195,899,813 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 195,316,220 - 195,396,328 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 205,192,718 - 205,268,692 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 205,185,927 - 205,268,692 (-) | Ensembl | panpan1.1 | | panPan2 | |
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Iqcg (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
|
IQCG (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 13 | 134,536,091 - 134,584,656 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 134,540,048 - 134,588,122 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 144,134,653 - 144,179,774 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
IQCG (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 15 | 91,607,639 - 91,675,719 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 15 | 91,608,206 - 91,661,776 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 65,557,049 - 65,616,829 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Iqcg (Heterocephalus glaber - naked mole-rat) |
|