CYP11B2 (cytochrome P450, family 11, subfamily B, polypeptide 2) - Rat Genome Database

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Gene: CYP11B2 (cytochrome P450, family 11, subfamily B, polypeptide 2) Canis lupus familiaris
Analyze
Symbol: CYP11B2
Name: cytochrome P450, family 11, subfamily B, polypeptide 2
RGD ID: 12259565
Description: ENCODES a protein that exhibits corticosterone 18-monooxygenase activity (ortholog); heme binding (ortholog); steroid 11-beta-monooxygenase activity (ortholog); INVOLVED IN adrenal gland development (ortholog); aldosterone biosynthetic process (ortholog); C21-steroid hormone biosynthetic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH adrenal cortical adenoma (ortholog); corticosterone methyloxidase deficiency 1 (ortholog); diabetes mellitus (ortholog); FOUND IN mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: cytochrome P450 11B1, mitochondrial; LOW QUALITY PROTEIN: cytochrome P450 11B1, mitochondrial; mitochondrial cytochrome P450 11B2
RGD Orthologs
Human
Mouse
Rat
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11336,866,476 - 36,880,625 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1336,823,864 - 36,833,784 (+)NCBI
ROS_Cfam_1.01337,342,302 - 37,352,691 (+)NCBI
UMICH_Zoey_3.11337,015,530 - 37,025,564 (+)NCBI
UNSW_CanFamBas_1.01337,134,290 - 37,144,097 (+)NCBI
UU_Cfam_GSD_1.01337,610,637 - 37,619,980 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
CYP11B2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11336,866,476 - 36,880,625 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1336,823,864 - 36,833,784 (+)NCBI
ROS_Cfam_1.01337,342,302 - 37,352,691 (+)NCBI
UMICH_Zoey_3.11337,015,530 - 37,025,564 (+)NCBI
UNSW_CanFamBas_1.01337,134,290 - 37,144,097 (+)NCBI
UU_Cfam_GSD_1.01337,610,637 - 37,619,980 (+)NCBI
CYP11B2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl8142,910,559 - 142,917,843 (-)EnsemblGRCh38hg38GRCh38
GRCh388142,910,559 - 142,917,843 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh378143,991,975 - 143,999,259 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368143,988,977 - 143,996,261 (-)NCBINCBI36hg18NCBI36
Build 348143,988,976 - 143,996,261NCBI
Celera8140,301,421 - 140,308,694 (-)NCBI
Cytogenetic Map8q24.3NCBI
HuRef8139,244,244 - 139,251,515 (-)NCBIHuRef
CHM1_18144,032,236 - 144,039,525 (-)NCBICHM1_1
Cyp11b2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391574,722,467 - 74,728,080 (-)NCBIGRCm39mm39
GRCm39 Ensembl1574,722,859 - 74,728,167 (-)Ensembl
GRCm381574,850,618 - 74,856,231 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1574,851,010 - 74,856,318 (-)EnsemblGRCm38mm10GRCm38
MGSCv371574,681,440 - 74,686,748 (-)NCBIGRCm37mm9NCBIm37
MGSCv361574,678,294 - 74,683,480 (-)NCBImm8
Celera1576,357,529 - 76,362,843 (-)NCBICelera
Cytogenetic Map15D3NCBI
cM Map1534.29NCBI
Cyp11b3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.27106,808,559 - 106,814,048 (-)NCBImRatBN7.2
Rnor_6.0 Ensembl7116,156,219 - 116,255,167 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.07116,155,928 - 116,161,781 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.07116,059,008 - 116,064,497 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47113,013,335 - 113,018,824 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.17113,047,564 - 113,053,054 (-)NCBI
Celera7103,180,975 - 103,186,464 (-)NCBICelera
Cytogenetic Map7q34NCBI
CYP11B2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.141,365,725 - 1,373,138 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
LOC101700701
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473513,701,382 - 13,708,750 (+)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High 5
Medium 1
Low 6 5 5 6 8
Below cutoff 5 5 11 6 6 1 6 6 10 6

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_022426825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022426826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022426827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022426828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022426829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022426830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022426831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038429457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038429460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038429465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038493411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038555706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038555707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038555708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038619612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038619613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038619614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038685225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038685226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038685227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_539192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ195094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_022426825   ⟹   XP_022282533
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11336,866,477 - 36,880,625 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022426826   ⟹   XP_022282534
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11336,866,477 - 36,880,625 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022426827   ⟹   XP_022282535
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11336,866,477 - 36,880,625 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022426828   ⟹   XP_022282536
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11336,866,704 - 36,880,625 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022426829   ⟹   XP_022282537
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11336,866,477 - 36,880,625 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022426830   ⟹   XP_022282538
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11336,866,476 - 36,880,625 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022426831   ⟹   XP_022282539
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11336,866,477 - 36,880,625 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038429457   ⟹   XP_038285385
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1336,823,880 - 36,833,784 (+)NCBI
RefSeq Acc Id: XM_038429460   ⟹   XP_038285388
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1336,823,864 - 36,833,784 (+)NCBI
RefSeq Acc Id: XM_038429465   ⟹   XP_038285393
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1336,823,882 - 36,833,784 (+)NCBI
RefSeq Acc Id: XM_038493411   ⟹   XP_038349339
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11337,015,530 - 37,025,564 (+)NCBI
RefSeq Acc Id: XM_038555706   ⟹   XP_038411634
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01337,610,648 - 37,619,980 (+)NCBI
RefSeq Acc Id: XM_038555707   ⟹   XP_038411635
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01337,610,637 - 37,619,980 (+)NCBI
RefSeq Acc Id: XM_038555708   ⟹   XP_038411636
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01337,610,648 - 37,619,980 (+)NCBI
RefSeq Acc Id: XM_038619612   ⟹   XP_038475540
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01337,134,327 - 37,144,097 (+)NCBI
RefSeq Acc Id: XM_038619613   ⟹   XP_038475541
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01337,134,290 - 37,144,097 (+)NCBI
RefSeq Acc Id: XM_038619614   ⟹   XP_038475542
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01337,134,330 - 37,144,097 (+)NCBI
RefSeq Acc Id: XM_038685225   ⟹   XP_038541153
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01337,342,316 - 37,352,691 (+)NCBI
RefSeq Acc Id: XM_038685226   ⟹   XP_038541154
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01337,342,302 - 37,352,691 (+)NCBI
RefSeq Acc Id: XM_038685227   ⟹   XP_038541155
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01337,342,318 - 37,352,691 (+)NCBI
RefSeq Acc Id: XM_539192   ⟹   XP_539192
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11336,866,477 - 36,880,625 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_539192   ⟸   XM_539192
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022282538   ⟸   XM_022426830
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_022282539   ⟸   XM_022426831
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_022282534   ⟸   XM_022426826
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022282533   ⟸   XM_022426825
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022282535   ⟸   XM_022426827
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022282537   ⟸   XM_022426829
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022282536   ⟸   XM_022426828
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_038349339   ⟸   XM_038493411
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038475541   ⟸   XM_038619613
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038475540   ⟸   XM_038619612
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038475542   ⟸   XM_038619614
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038541154   ⟸   XM_038685226
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038541153   ⟸   XM_038685225
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038541155   ⟸   XM_038685227
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038285388   ⟸   XM_038429460
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038285385   ⟸   XM_038429457
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038285393   ⟸   XM_038429465
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038411635   ⟸   XM_038555707
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038411634   ⟸   XM_038555706
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038411636   ⟸   XM_038555708
- Peptide Label: isoform X3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000001285 ENTREZGENE
NCBI Gene CYP11B2 ENTREZGENE