SPARC (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 4 | 57,659,541 - 57,682,147 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 4 | 57,659,650 - 57,681,711 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 4 | 57,479,010 - 57,501,597 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 4 | 58,102,077 - 58,124,747 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 4 | 58,101,302 - 58,124,748 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 4 | 57,918,069 - 57,940,655 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 4 | 58,016,600 - 58,039,187 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 4 | 58,519,992 - 58,542,658 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
SPARC (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 5 | 151,661,096 - 151,686,915 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 5 | 151,661,096 - 151,686,975 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 5 | 151,040,657 - 151,066,476 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 5 | 151,021,201 - 151,046,710 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 5 | 151,021,203 - 151,046,710 | NCBI | | | | | Celera | 5 | 147,122,406 - 147,147,929 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | q33.1 | NCBI | | | | | HuRef | 5 | 146,186,043 - 146,212,010 (-) | NCBI | | HuRef | | | CHM1_1 | 5 | 150,473,070 - 150,499,042 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 5 | 152,200,073 - 152,225,896 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Sparc (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 11 | 55,284,985 - 55,310,906 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 55,285,326 - 55,314,009 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 55,394,159 - 55,420,080 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 55,394,500 - 55,423,183 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 11 | 55,208,003 - 55,233,582 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 11 | 55,237,924 - 55,263,289 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 11 | 59,982,920 - 59,995,424 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | B1.3 | NCBI | | | | | cM Map | 11 | 33.04 | NCBI | | | | |
|
Sparc (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 10 | 40,017,065 - 40,038,816 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 10 | 39,516,394 - 39,538,252 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 10 | 39,516,406 - 39,538,396 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 10 | 44,200,679 - 44,221,761 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 10 | 43,690,774 - 43,711,860 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 10 | 39,194,463 - 39,215,539 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 10 | 40,742,390 - 40,764,232 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 10 | 40,742,400 - 40,764,185 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 10 | 40,573,510 - 40,595,261 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 10 | 40,809,730 - 40,831,481 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 10 | 40,823,352 - 40,845,104 (-) | NCBI | | | | | Celera | 10 | 38,848,158 - 38,869,906 (-) | NCBI | | Celera | | | RH 3.4 Map | 10 | 414.6 | RGD | | | | | Cytogenetic Map | 10 | q22 | NCBI | | | | |
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Sparc (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955408 | 6,099,003 - 6,122,459 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955408 | 6,100,123 - 6,122,460 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
SPARC (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 4 | 146,892,751 - 146,917,550 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 5 | 145,032,296 - 145,057,021 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 5 | 147,087,903 - 147,112,466 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 5 | 153,091,160 - 153,115,745 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 5 | 153,090,181 - 153,115,750 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
Sparc (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024407213 | 112,576,762 - 112,597,465 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936515 | 11,025,724 - 11,046,849 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936515 | 11,026,156 - 11,046,812 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
SPARC (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 16 | 71,357,586 - 71,381,161 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 16 | 71,368,164 - 71,380,972 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 16 | 77,576,864 - 77,584,734 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
SPARC (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 23 | 54,224,003 - 54,248,869 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 23 | 54,222,838 - 54,238,006 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666034 | 23,456,066 - 23,481,034 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Sparc (Heterocephalus glaber - naked mole-rat) |
|