DNHD1 (dynein heavy chain domain 1) - Rat Genome Database

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Gene: DNHD1 (dynein heavy chain domain 1) Canis lupus familiaris
Analyze
Symbol: DNHD1
Name: dynein heavy chain domain 1
RGD ID: 12256389
Description: INVOLVED IN flagellated sperm motility (ortholog); sperm flagellum assembly (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); essential tremor (ortholog); genetic disease (ortholog); FOUND IN sperm flagellum (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: CCDC35; coiled-coil domain containing 35; DNHD1L; dynein heavy chain domain-containing protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12129,806,731 - 29,886,637 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2129,508,420 - 29,588,482 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02130,632,697 - 30,712,794 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12129,953,546 - 30,033,583 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02130,119,436 - 30,199,226 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02130,314,710 - 30,394,551 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
DNHD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12129,806,731 - 29,886,637 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2129,508,420 - 29,588,482 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02130,632,697 - 30,712,794 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12129,953,546 - 30,033,583 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02130,119,436 - 30,199,226 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02130,314,710 - 30,394,551 (+)NCBIUU_Cfam_GSD_1.0
DNHD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38116,497,280 - 6,572,020 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl116,497,260 - 6,593,758 (+)EnsemblGRCh38hg38GRCh38
GRCh37116,518,510 - 6,593,250 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36116,543,911 - 6,549,825 (+)NCBINCBI36Build 36hg18NCBI36
Celera116,637,586 - 6,712,323 (+)NCBICelera
Cytogenetic Map11p15.4NCBI
HuRef116,177,598 - 6,252,412 (+)NCBIHuRef
CHM1_1116,517,654 - 6,592,369 (+)NCBICHM1_1
T2T-CHM13v2.0116,555,758 - 6,630,491 (+)NCBIT2T-CHM13v2.0
Dnhd1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397105,299,983 - 105,371,007 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7105,300,034 - 105,371,006 (+)EnsemblGRCm39 Ensembl
GRCm387105,650,776 - 105,721,800 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7105,650,827 - 105,721,799 (+)EnsemblGRCm38mm10GRCm38
MGSCv377112,799,341 - 112,854,161 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367105,525,514 - 105,595,620 (+)NCBIMGSCv36mm8
Celera7105,922,116 - 105,993,110 (+)NCBICelera
Cytogenetic Map7E3NCBI
cM Map755.93NCBI
Dnhd1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81169,402,615 - 169,486,684 (+)NCBIGRCr8
mRatBN7.21159,990,785 - 160,077,990 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1159,990,438 - 160,074,858 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01170,473,792 - 170,570,220 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1170,471,272 - 170,565,063 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01177,487,073 - 177,576,072 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41163,380,065 - 163,467,261 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1157,923,188 - 158,012,263 (+)NCBICelera
Cytogenetic Map1q32NCBI
Dnhd1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541422,231,843 - 22,300,770 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541422,230,887 - 22,300,804 (+)NCBIChiLan1.0ChiLan1.0
DNHD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v298,934,333 - 9,009,134 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1118,898,212 - 8,973,009 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0116,628,568 - 6,703,994 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1116,312,254 - 6,387,032 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl116,312,254 - 6,386,993 (+)Ensemblpanpan1.1panPan2
Dnhd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494756,044,865 - 56,132,664 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936842543,702 - 630,585 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNHD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.193,177,007 - 3,242,892 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.293,834,047 - 3,901,295 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DNHD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1158,254,559 - 58,330,856 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl158,254,609 - 58,329,357 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038156,080,345 - 156,156,488 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dnhd1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248178,009,054 - 8,076,609 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in DNHD1
679 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_022407775   ⟹   XP_022263483
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12129,806,731 - 29,886,637 (+)NCBI
Dog10K_Boxer_Tasha2129,508,420 - 29,588,482 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038430364   ⟹   XP_038286292
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02130,632,697 - 30,712,794 (+)NCBI
RefSeq Acc Id: XM_038505694   ⟹   XP_038361622
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12129,953,546 - 30,033,583 (+)NCBI
RefSeq Acc Id: XM_038568901   ⟹   XP_038424829
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02130,314,710 - 30,394,551 (+)NCBI
RefSeq Acc Id: XM_038633067   ⟹   XP_038488995
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02130,119,436 - 30,199,226 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_022263483   ⟸   XM_022407775
- UniProtKB: A0A8C0K6Y7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038361622   ⟸   XM_038505694
RefSeq Acc Id: XP_038488995   ⟸   XM_038633067
RefSeq Acc Id: XP_038286292   ⟸   XM_038430364
- UniProtKB: A0A8C0K6Y7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038424829   ⟸   XM_038568901
- UniProtKB: A0A8C0K6Y7 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
NCBI Gene DNHD1 ENTREZGENE
UniProt A0A8C0K6Y7 ENTREZGENE
VGNC ID VGNC:40030 ENTREZGENE