AGGF1 (angiogenic factor with G-patch and FHA domains 1) - Rat Genome Database

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Gene: AGGF1 (angiogenic factor with G-patch and FHA domains 1) Canis lupus familiaris
Analyze
Symbol: AGGF1
Name: angiogenic factor with G-patch and FHA domains 1
RGD ID: 12253526
Description: ENCODES a protein that exhibits nucleic acid binding (inferred); INVOLVED IN cell adhesion (inferred); positive regulation of angiogenesis (inferred); positive regulation of endothelial cell proliferation (inferred); ASSOCIATED WITH genetic disease (ortholog); Hermansky-Pudlak syndrome 2 (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (inferred); extracellular region (inferred); perinuclear region of cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: angiogenic factor with G patch and FHA domains 1; LOC102153926; uncharacterized LOC102153926
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1329,578,050 - 29,682,265 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl329,647,592 - 29,682,776 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha330,804,004 - 30,921,635 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0329,486,014 - 29,601,272 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl329,566,220 - 29,601,792 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1329,420,293 - 29,538,033 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0329,400,940 - 29,518,896 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0329,770,262 - 29,888,021 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
AGGF1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1329,578,050 - 29,682,265 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl329,647,592 - 29,682,776 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha330,804,004 - 30,921,635 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0329,486,014 - 29,601,272 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl329,566,220 - 29,601,792 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1329,420,293 - 29,538,033 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0329,400,940 - 29,518,896 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0329,770,262 - 29,888,021 (-)NCBIUU_Cfam_GSD_1.0
AGGF1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38577,030,404 - 77,065,234 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl577,029,251 - 77,065,234 (+)EnsemblGRCh38hg38GRCh38
GRCh37576,326,229 - 76,361,059 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36576,361,988 - 76,396,794 (+)NCBINCBI36Build 36hg18NCBI36
Build 34576,361,987 - 76,396,791NCBI
Celera572,220,718 - 72,255,361 (+)NCBICelera
Cytogenetic Map5q13.3NCBI
HuRef571,532,859 - 71,567,837 (+)NCBIHuRef
CHM1_1575,759,108 - 75,794,521 (+)NCBICHM1_1
T2T-CHM13v2.0577,512,128 - 77,546,904 (+)NCBIT2T-CHM13v2.0
Aggf1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391395,487,191 - 95,511,865 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1395,487,191 - 95,511,860 (-)EnsemblGRCm39 Ensembl
GRCm381395,350,683 - 95,375,357 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1395,350,683 - 95,375,352 (-)EnsemblGRCm38mm10GRCm38
MGSCv371396,120,671 - 96,145,289 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361396,451,415 - 96,476,033 (-)NCBIMGSCv36mm8
Celera1398,972,068 - 98,996,687 (-)NCBICelera
Cytogenetic Map13D1NCBI
cM Map1349.41NCBI
Aggf1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8228,354,073 - 28,380,794 (-)NCBIGRCr8
mRatBN7.2226,619,336 - 26,646,050 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl226,619,339 - 26,645,952 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0225,068,804 - 25,095,429 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl225,069,620 - 25,095,106 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0244,227,286 - 44,253,899 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4225,723,668 - 25,749,359 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1225,644,037 - 25,679,865 (-)NCBI
Celera222,684,509 - 22,711,225 (-)NCBICelera
Cytogenetic Map2q12NCBI
Aggf1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542523,847,673 - 23,874,404 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542523,847,502 - 23,873,964 (-)NCBIChiLan1.0ChiLan1.0
AGGF1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2438,232,858 - 38,265,220 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1536,386,503 - 36,418,418 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0538,236,209 - 38,268,530 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1538,762,317 - 38,794,606 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl538,762,317 - 38,794,594 (-)Ensemblpanpan1.1panPan2
Aggf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213185,749,025 - 185,789,458 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365495,068,656 - 5,111,406 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365495,069,164 - 5,109,299 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AGGF1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl285,890,481 - 85,934,358 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1285,890,423 - 85,941,314 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2287,506,911 - 87,552,643 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AGGF1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1471,277,293 - 71,309,973 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl471,277,315 - 71,310,159 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604920,115,923 - 20,148,633 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aggf1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248691,538,833 - 1,580,471 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248691,538,603 - 1,577,119 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in AGGF1
1052 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 13 1 4 12 10 1
Low 5 5 9 6 5 6 2 6 8 5
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005618184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005618185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014112261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022416772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038596783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038596784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038596786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038660996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038660997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038660998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002624975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002624977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002624978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002624979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323202 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005356848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005356849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005356850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005356851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005356852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005356853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005356854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005356855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005391382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005391383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005391384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005391385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005391386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005391387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005391388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005391389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005424396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005424397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005424398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005424399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005424400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005424401 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005424402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005424403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000014724   ⟹   ENSCAFP00000013618
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl329,647,592 - 29,682,250 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000064868   ⟹   ENSCAFP00000054296
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl329,647,592 - 29,682,776 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845017623   ⟹   ENSCAFP00845013720
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl329,566,220 - 29,601,792 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845017704   ⟹   ENSCAFP00845013786
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl329,566,220 - 29,601,272 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845017782   ⟹   ENSCAFP00845013850
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl329,566,220 - 29,601,272 (-)Ensembl
RefSeq Acc Id: XM_005618184   ⟹   XP_005618241
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1329,635,780 - 29,682,265 (-)NCBI
Dog10K_Boxer_Tasha330,875,430 - 30,921,635 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005618185   ⟹   XP_005618242
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1329,645,725 - 29,682,265 (-)NCBI
Dog10K_Boxer_Tasha330,885,379 - 30,921,635 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014112261   ⟹   XP_013967736
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1329,645,725 - 29,682,265 (-)NCBI
Dog10K_Boxer_Tasha330,885,379 - 30,921,635 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038471572   ⟹   XP_038327500
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1329,501,727 - 29,538,033 (-)NCBI
RefSeq Acc Id: XM_038471573   ⟹   XP_038327501
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1329,491,773 - 29,538,033 (-)NCBI
RefSeq Acc Id: XM_038471574   ⟹   XP_038327502
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1329,501,727 - 29,538,033 (-)NCBI
RefSeq Acc Id: XM_038532504   ⟹   XP_038388432
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0329,851,698 - 29,888,021 (-)NCBI
RefSeq Acc Id: XM_038532505   ⟹   XP_038388433
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0329,841,740 - 29,888,021 (-)NCBI
RefSeq Acc Id: XM_038532507   ⟹   XP_038388435
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0329,851,698 - 29,888,021 (-)NCBI
RefSeq Acc Id: XM_038596783   ⟹   XP_038452711
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0329,482,631 - 29,518,896 (-)NCBI
RefSeq Acc Id: XM_038596784   ⟹   XP_038452712
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0329,472,674 - 29,518,896 (-)NCBI
RefSeq Acc Id: XM_038596786   ⟹   XP_038452714
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0329,482,631 - 29,518,896 (-)NCBI
RefSeq Acc Id: XM_038660996   ⟹   XP_038516924
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0329,564,993 - 29,601,272 (-)NCBI
RefSeq Acc Id: XM_038660997   ⟹   XP_038516925
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0329,555,041 - 29,601,272 (-)NCBI
RefSeq Acc Id: XM_038660998   ⟹   XP_038516926
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0329,564,993 - 29,601,272 (-)NCBI
RefSeq Acc Id: XR_002624978
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1329,578,050 - 29,682,265 (-)NCBI
Dog10K_Boxer_Tasha330,817,745 - 30,921,635 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005323196
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1329,434,034 - 29,538,033 (-)NCBI
RefSeq Acc Id: XR_005323197
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1329,434,034 - 29,538,033 (-)NCBI
RefSeq Acc Id: XR_005323198
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1329,434,034 - 29,538,033 (-)NCBI
RefSeq Acc Id: XR_005323199
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1329,434,034 - 29,538,033 (-)NCBI
RefSeq Acc Id: XR_005323200
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1329,420,293 - 29,538,033 (-)NCBI
RefSeq Acc Id: XR_005323201
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1329,420,293 - 29,538,033 (-)NCBI
RefSeq Acc Id: XR_005323202
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1329,434,034 - 29,538,033 (-)NCBI
RefSeq Acc Id: XR_005323203
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1329,434,034 - 29,538,033 (-)NCBI
RefSeq Acc Id: XR_005323416
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha330,817,745 - 30,921,635 (-)NCBI
RefSeq Acc Id: XR_005323418
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha330,817,745 - 30,921,635 (-)NCBI
RefSeq Acc Id: XR_005323422
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha330,817,745 - 30,921,635 (-)NCBI
RefSeq Acc Id: XR_005323425
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha330,804,004 - 30,921,635 (-)NCBI
RefSeq Acc Id: XR_005323429
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha330,804,004 - 30,921,635 (-)NCBI
RefSeq Acc Id: XR_005323430
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha330,817,745 - 30,921,635 (-)NCBI
RefSeq Acc Id: XR_005323431
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha330,817,745 - 30,921,635 (-)NCBI
RefSeq Acc Id: XR_005356848
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0329,784,016 - 29,888,021 (-)NCBI
RefSeq Acc Id: XR_005356849
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0329,784,016 - 29,888,021 (-)NCBI
RefSeq Acc Id: XR_005356850
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0329,784,016 - 29,888,021 (-)NCBI
RefSeq Acc Id: XR_005356851
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0329,784,016 - 29,888,021 (-)NCBI
RefSeq Acc Id: XR_005356852
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0329,770,262 - 29,888,021 (-)NCBI
RefSeq Acc Id: XR_005356853
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0329,770,262 - 29,888,021 (-)NCBI
RefSeq Acc Id: XR_005356854
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0329,784,016 - 29,888,021 (-)NCBI
RefSeq Acc Id: XR_005356855
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0329,784,016 - 29,888,021 (-)NCBI
RefSeq Acc Id: XR_005391382
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0329,414,721 - 29,518,896 (-)NCBI
RefSeq Acc Id: XR_005391383
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0329,414,721 - 29,518,896 (-)NCBI
RefSeq Acc Id: XR_005391384
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0329,414,721 - 29,518,896 (-)NCBI
RefSeq Acc Id: XR_005391385
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0329,414,721 - 29,518,896 (-)NCBI
RefSeq Acc Id: XR_005391386
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0329,400,940 - 29,518,896 (-)NCBI
RefSeq Acc Id: XR_005391387
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0329,400,940 - 29,518,896 (-)NCBI
RefSeq Acc Id: XR_005391388
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0329,414,721 - 29,518,896 (-)NCBI
RefSeq Acc Id: XR_005391389
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0329,414,721 - 29,518,896 (-)NCBI
RefSeq Acc Id: XR_005424396
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0329,497,369 - 29,601,272 (-)NCBI
RefSeq Acc Id: XR_005424397
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0329,497,369 - 29,601,272 (-)NCBI
RefSeq Acc Id: XR_005424398
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0329,497,369 - 29,601,272 (-)NCBI
RefSeq Acc Id: XR_005424399
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0329,497,369 - 29,601,272 (-)NCBI
RefSeq Acc Id: XR_005424400
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0329,486,014 - 29,601,272 (-)NCBI
RefSeq Acc Id: XR_005424401
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0329,486,014 - 29,601,272 (-)NCBI
RefSeq Acc Id: XR_005424402
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0329,497,369 - 29,601,272 (-)NCBI
RefSeq Acc Id: XR_005424403
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0329,497,369 - 29,601,272 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_005618241   ⟸   XM_005618184
- Peptide Label: isoform X1
- UniProtKB: A0A8P0NBE7 (UniProtKB/TrEMBL),   A0A8C0N5R9 (UniProtKB/TrEMBL),   A0A8C0PVJ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013967736   ⟸   XM_014112261
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LP13 (UniProtKB/TrEMBL),   A0A8C0N5R9 (UniProtKB/TrEMBL),   A0A8C0PVJ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005618242   ⟸   XM_005618185
- Peptide Label: isoform X1
- UniProtKB: A0A8P0NBE7 (UniProtKB/TrEMBL),   A0A8C0N5R9 (UniProtKB/TrEMBL),   A0A8C0PVJ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000054296   ⟸   ENSCAFT00000064868
RefSeq Acc Id: ENSCAFP00000013618   ⟸   ENSCAFT00000014724
RefSeq Acc Id: XP_038327501   ⟸   XM_038471573
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038327502   ⟸   XM_038471574
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038327500   ⟸   XM_038471572
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038452712   ⟸   XM_038596784
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038452714   ⟸   XM_038596786
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038452711   ⟸   XM_038596783
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038516925   ⟸   XM_038660997
- Peptide Label: isoform X1
- UniProtKB: A0A8I3NES6 (UniProtKB/TrEMBL),   A0A8C0N5R9 (UniProtKB/TrEMBL),   A0A8C0PVJ7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038516926   ⟸   XM_038660998
- Peptide Label: isoform X2
- UniProtKB: A0A8C0N5R9 (UniProtKB/TrEMBL),   A0A8C0PVJ7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038516924   ⟸   XM_038660996
- Peptide Label: isoform X1
- UniProtKB: A0A8I3NES6 (UniProtKB/TrEMBL),   A0A8C0N5R9 (UniProtKB/TrEMBL),   A0A8C0PVJ7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388433   ⟸   XM_038532505
- Peptide Label: isoform X1
- UniProtKB: A0A8C0N5R9 (UniProtKB/TrEMBL),   A0A8C0PVJ7 (UniProtKB/TrEMBL),   A0A8I3NES6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388435   ⟸   XM_038532507
- Peptide Label: isoform X2
- UniProtKB: A0A8C0N5R9 (UniProtKB/TrEMBL),   A0A8C0PVJ7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388432   ⟸   XM_038532504
- Peptide Label: isoform X1
- UniProtKB: A0A8C0N5R9 (UniProtKB/TrEMBL),   A0A8C0PVJ7 (UniProtKB/TrEMBL),   A0A8I3NES6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845013850   ⟸   ENSCAFT00845017782
RefSeq Acc Id: ENSCAFP00845013720   ⟸   ENSCAFT00845017623
RefSeq Acc Id: ENSCAFP00845013786   ⟸   ENSCAFT00845017704
Protein Domains
FHA   G-patch


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000009268 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030010956 UniProtKB/TrEMBL
  ENSCAFG00040001750 UniProtKB/TrEMBL
  ENSCAFG00845010001 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000014724.5 UniProtKB/TrEMBL
  ENSCAFT00000064868.2 UniProtKB/TrEMBL
  ENSCAFT00030020437.1 UniProtKB/TrEMBL
  ENSCAFT00040003373.1 UniProtKB/TrEMBL
  ENSCAFT00845017623 ENTREZGENE
  ENSCAFT00845017623.1 UniProtKB/TrEMBL
  ENSCAFT00845017704 ENTREZGENE
  ENSCAFT00845017704.1 UniProtKB/TrEMBL
  ENSCAFT00845017782 ENTREZGENE
  ENSCAFT00845017782.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.200.20 UniProtKB/TrEMBL
InterPro AGGF1_OCRE UniProtKB/TrEMBL
  FHA_dom UniProtKB/TrEMBL
  G_patch_dom UniProtKB/TrEMBL
  OCRE UniProtKB/TrEMBL
  SMAD_FHA_dom_sf UniProtKB/TrEMBL
KEGG Report cfa:479176 UniProtKB/TrEMBL
NCBI Gene AGGF1 ENTREZGENE
PANTHER ANGIOGENIC FACTOR WITH G PATCH AND FHA DOMAINS 1 UniProtKB/TrEMBL
  ANGIOGENIC FACTOR WITH G PATCH AND FHA DOMAINS 1 UniProtKB/TrEMBL
Pfam FHA UniProtKB/TrEMBL
  G-patch UniProtKB/TrEMBL
  OCRE UniProtKB/TrEMBL
PROSITE FHA_DOMAIN UniProtKB/TrEMBL
  G_PATCH UniProtKB/TrEMBL
SMART FHA UniProtKB/TrEMBL
  G_patch UniProtKB/TrEMBL
Superfamily-SCOP SSF49879 UniProtKB/TrEMBL
UniProt A0A8C0LP13 ENTREZGENE
  A0A8C0N5R9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PVJ7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3N911_CANLF UniProtKB/TrEMBL
  A0A8I3NES6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NFR2_CANLF UniProtKB/TrEMBL
  A0A8P0NBE7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0P3S6_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:37702 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-14 AGGF1  angiogenic factor with G-patch and FHA domains 1  LOC102153926  uncharacterized LOC102153926  Data merged from RGD:12264363 737654 PROVISIONAL