AURKB (aurora kinase B) - Rat Genome Database

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Gene: AURKB (aurora kinase B) Canis lupus familiaris
Analyze
Symbol: AURKB
Name: aurora kinase B
RGD ID: 12252448
Description: ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN aging (ortholog); cell population proliferation (ortholog); cleavage furrow formation (ortholog); ASSOCIATED WITH common variable immunodeficiency (ortholog); COVID-19 (ortholog); Diamond-Blackfan anemia (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: serine/threonine-protein kinase 12
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1533,014,098 - 33,028,951 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl533,014,102 - 33,033,948 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha533,150,233 - 33,165,558 (-)NCBI
ROS_Cfam_1.0533,117,167 - 33,132,493 (-)NCBI
UMICH_Zoey_3.1533,083,909 - 33,099,234 (-)NCBI
UNSW_CanFamBas_1.0533,039,680 - 33,055,006 (-)NCBI
UU_Cfam_GSD_1.0533,219,643 - 33,234,968 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
AURKB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1533,014,098 - 33,028,951 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl533,014,102 - 33,033,948 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha533,150,233 - 33,165,558 (-)NCBI
ROS_Cfam_1.0533,117,167 - 33,132,493 (-)NCBI
UMICH_Zoey_3.1533,083,909 - 33,099,234 (-)NCBI
UNSW_CanFamBas_1.0533,039,680 - 33,055,006 (-)NCBI
UU_Cfam_GSD_1.0533,219,643 - 33,234,968 (-)NCBI
AURKB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl178,204,733 - 8,210,600 (-)EnsemblGRCh38hg38GRCh38
GRCh38178,204,731 - 8,210,767 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37178,108,049 - 8,113,893 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36178,048,774 - 8,054,608 (-)NCBINCBI36hg18NCBI36
Build 34178,048,781 - 8,054,604NCBI
Celera178,136,501 - 8,142,334 (-)NCBI
Cytogenetic Map17p13.1NCBI
HuRef178,003,833 - 8,009,723 (-)NCBIHuRef
CHM1_1178,117,184 - 8,123,078 (-)NCBICHM1_1
Aurkb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391168,936,450 - 68,942,490 (+)NCBIGRCm39mm39
GRCm39 Ensembl1168,936,473 - 68,942,490 (+)Ensembl
GRCm381169,045,624 - 69,051,664 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1169,045,647 - 69,051,664 (+)EnsemblGRCm38mm10GRCm38
MGSCv371168,859,145 - 68,865,164 (+)NCBIGRCm37mm9NCBIm37
MGSCv361168,861,838 - 68,867,857 (+)NCBImm8
Celera1175,989,163 - 75,995,182 (+)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1142.32NCBI
Aurkb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21053,744,290 - 53,750,831 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1053,745,142 - 53,750,837 (+)Ensembl
Rnor_6.01055,625,860 - 55,632,399 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1055,626,741 - 55,634,991 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01055,368,674 - 55,375,204 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41055,798,710 - 55,804,367 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11055,812,332 - 55,817,990 (+)NCBI
Celera1052,911,399 - 52,917,056 (+)NCBICelera
Cytogenetic Map10q24NCBI
Aurkb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554678,715,136 - 8,723,932 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554678,715,387 - 8,720,889 (+)NCBIChiLan1.0ChiLan1.0
AURKB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11748,180,066 - 48,186,129 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1748,180,066 - 48,186,129 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01743,447,661 - 43,453,864 (+)NCBIMhudiblu_PPA_v0panPan3
Aurkb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560247,961,511 - 47,966,600 (-)NCBI
SpeTri2.0NW_0049365951,435,601 - 1,437,423 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AURKB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1253,410,176 - 53,423,225 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11253,410,833 - 53,426,165 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21255,886,065 - 55,894,911 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AURKB
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1167,571,255 - 7,583,034 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl167,570,538 - 7,582,959 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605913,820,184 - 13,826,795 (+)NCBIVero_WHO_p1.0
Aurkb
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478610,769,797 - 10,775,142 (-)NCBIHetGla_female_1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 12 5 6 6 8 10
Low 5 10 6 1 6 3 6 6
Below cutoff 3

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005620013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005620014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005620016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005620019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005620020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014113581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022418554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022418555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022418556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475632 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038475637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038536813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038600955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038600956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038600957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038600958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038600959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038600960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038600961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038600962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038600963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038665531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000026940   ⟹   ENSCAFP00000025043
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl533,014,102 - 33,018,882 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000063657   ⟹   ENSCAFP00000053411
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl533,014,102 - 33,033,948 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000065459   ⟹   ENSCAFP00000048954
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl533,014,102 - 33,027,054 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000073242   ⟹   ENSCAFP00000049949
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl533,014,102 - 33,027,018 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000082255   ⟹   ENSCAFP00000052341
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl533,014,102 - 33,028,926 (-)Ensembl
RefSeq Acc Id: XM_005620013   ⟹   XP_005620070
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1533,014,098 - 33,018,892 (-)NCBI
Dog10K_Boxer_Tasha533,150,233 - 33,154,999 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005620014   ⟹   XP_005620071
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1533,014,100 - 33,028,951 (-)NCBI
Dog10K_Boxer_Tasha533,150,235 - 33,165,558 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005620016   ⟹   XP_005620073
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1533,014,100 - 33,018,652 (-)NCBI
Dog10K_Boxer_Tasha533,150,235 - 33,154,805 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005620019   ⟹   XP_005620076
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1533,014,100 - 33,028,947 (-)NCBI
Dog10K_Boxer_Tasha533,150,235 - 33,165,557 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005620020   ⟹   XP_005620077
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1533,014,100 - 33,018,864 (-)NCBI
Dog10K_Boxer_Tasha533,150,235 - 33,154,985 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014113581   ⟹   XP_013969056
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1533,014,100 - 33,018,791 (-)NCBI
Dog10K_Boxer_Tasha533,150,235 - 33,154,878 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022418554   ⟹   XP_022274262
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1533,014,100 - 33,028,947 (-)NCBI
Dog10K_Boxer_Tasha533,150,235 - 33,165,557 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022418555   ⟹   XP_022274263
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1533,014,100 - 33,028,947 (-)NCBI
Dog10K_Boxer_Tasha533,150,235 - 33,165,557 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022418556   ⟹   XP_022274264
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1533,014,100 - 33,016,157 (-)NCBI
Dog10K_Boxer_Tasha533,150,235 - 33,152,292 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038475629   ⟹   XP_038331557
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1533,083,911 - 33,088,481 (-)NCBI
RefSeq Acc Id: XM_038475630   ⟹   XP_038331558
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1533,083,911 - 33,099,234 (-)NCBI
RefSeq Acc Id: XM_038475631   ⟹   XP_038331559
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1533,083,911 - 33,088,554 (-)NCBI
RefSeq Acc Id: XM_038475632   ⟹   XP_038331560
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1533,083,909 - 33,088,675 (-)NCBI
RefSeq Acc Id: XM_038475633   ⟹   XP_038331561
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1533,083,911 - 33,099,233 (-)NCBI
RefSeq Acc Id: XM_038475634   ⟹   XP_038331562
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1533,083,911 - 33,088,661 (-)NCBI
RefSeq Acc Id: XM_038475635   ⟹   XP_038331563
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1533,083,911 - 33,099,233 (-)NCBI
RefSeq Acc Id: XM_038475636   ⟹   XP_038331564
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1533,083,911 - 33,099,233 (-)NCBI
RefSeq Acc Id: XM_038475637   ⟹   XP_038331565
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1533,083,911 - 33,085,967 (-)NCBI
RefSeq Acc Id: XM_038536805   ⟹   XP_038392733
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0533,219,645 - 33,224,215 (-)NCBI
RefSeq Acc Id: XM_038536806   ⟹   XP_038392734
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0533,219,645 - 33,234,968 (-)NCBI
RefSeq Acc Id: XM_038536807   ⟹   XP_038392735
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0533,219,645 - 33,224,288 (-)NCBI
RefSeq Acc Id: XM_038536808   ⟹   XP_038392736
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0533,219,643 - 33,224,409 (-)NCBI
RefSeq Acc Id: XM_038536809   ⟹   XP_038392737
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0533,219,645 - 33,234,967 (-)NCBI
RefSeq Acc Id: XM_038536810   ⟹   XP_038392738
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0533,219,645 - 33,224,395 (-)NCBI
RefSeq Acc Id: XM_038536811   ⟹   XP_038392739
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0533,219,645 - 33,234,967 (-)NCBI
RefSeq Acc Id: XM_038536812   ⟹   XP_038392740
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0533,219,645 - 33,234,967 (-)NCBI
RefSeq Acc Id: XM_038536813   ⟹   XP_038392741
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0533,219,645 - 33,221,702 (-)NCBI
RefSeq Acc Id: XM_038600955   ⟹   XP_038456883
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0533,039,682 - 33,044,253 (-)NCBI
RefSeq Acc Id: XM_038600956   ⟹   XP_038456884
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0533,039,682 - 33,055,006 (-)NCBI
RefSeq Acc Id: XM_038600957   ⟹   XP_038456885
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0533,039,682 - 33,044,326 (-)NCBI
RefSeq Acc Id: XM_038600958   ⟹   XP_038456886
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0533,039,680 - 33,044,447 (-)NCBI
RefSeq Acc Id: XM_038600959   ⟹   XP_038456887
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0533,039,682 - 33,055,005 (-)NCBI
RefSeq Acc Id: XM_038600960   ⟹   XP_038456888
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0533,039,682 - 33,044,433 (-)NCBI
RefSeq Acc Id: XM_038600961   ⟹   XP_038456889
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0533,039,682 - 33,055,005 (-)NCBI
RefSeq Acc Id: XM_038600962   ⟹   XP_038456890
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0533,039,682 - 33,055,005 (-)NCBI
RefSeq Acc Id: XM_038600963   ⟹   XP_038456891
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0533,039,682 - 33,041,739 (-)NCBI
RefSeq Acc Id: XM_038665522   ⟹   XP_038521450
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0533,117,169 - 33,121,741 (-)NCBI
RefSeq Acc Id: XM_038665523   ⟹   XP_038521451
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0533,117,169 - 33,132,493 (-)NCBI
RefSeq Acc Id: XM_038665524   ⟹   XP_038521452
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0533,117,169 - 33,121,818 (-)NCBI
RefSeq Acc Id: XM_038665525   ⟹   XP_038521453
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0533,117,167 - 33,121,935 (-)NCBI
RefSeq Acc Id: XM_038665526   ⟹   XP_038521454
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0533,117,169 - 33,132,492 (-)NCBI
RefSeq Acc Id: XM_038665527   ⟹   XP_038521455
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0533,117,169 - 33,121,920 (-)NCBI
RefSeq Acc Id: XM_038665528   ⟹   XP_038521456
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0533,117,169 - 33,132,492 (-)NCBI
RefSeq Acc Id: XM_038665530   ⟹   XP_038521458
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0533,117,169 - 33,132,492 (-)NCBI
RefSeq Acc Id: XM_038665531   ⟹   XP_038521459
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0533,117,169 - 33,119,226 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005620070 (Get FASTA)   NCBI Sequence Viewer  
  XP_005620071 (Get FASTA)   NCBI Sequence Viewer  
  XP_005620073 (Get FASTA)   NCBI Sequence Viewer  
  XP_005620076 (Get FASTA)   NCBI Sequence Viewer  
  XP_005620077 (Get FASTA)   NCBI Sequence Viewer  
  XP_013969056 (Get FASTA)   NCBI Sequence Viewer  
  XP_022274262 (Get FASTA)   NCBI Sequence Viewer  
  XP_022274263 (Get FASTA)   NCBI Sequence Viewer  
  XP_022274264 (Get FASTA)   NCBI Sequence Viewer  
  XP_038331557 (Get FASTA)   NCBI Sequence Viewer  
  XP_038331558 (Get FASTA)   NCBI Sequence Viewer  
  XP_038331559 (Get FASTA)   NCBI Sequence Viewer  
  XP_038331560 (Get FASTA)   NCBI Sequence Viewer  
  XP_038331561 (Get FASTA)   NCBI Sequence Viewer  
  XP_038331562 (Get FASTA)   NCBI Sequence Viewer  
  XP_038331563 (Get FASTA)   NCBI Sequence Viewer  
  XP_038331564 (Get FASTA)   NCBI Sequence Viewer  
  XP_038331565 (Get FASTA)   NCBI Sequence Viewer  
  XP_038392733 (Get FASTA)   NCBI Sequence Viewer  
  XP_038392734 (Get FASTA)   NCBI Sequence Viewer  
  XP_038392735 (Get FASTA)   NCBI Sequence Viewer  
  XP_038392736 (Get FASTA)   NCBI Sequence Viewer  
  XP_038392737 (Get FASTA)   NCBI Sequence Viewer  
  XP_038392738 (Get FASTA)   NCBI Sequence Viewer  
  XP_038392739 (Get FASTA)   NCBI Sequence Viewer  
  XP_038392740 (Get FASTA)   NCBI Sequence Viewer  
  XP_038392741 (Get FASTA)   NCBI Sequence Viewer  
  XP_038456883 (Get FASTA)   NCBI Sequence Viewer  
  XP_038456884 (Get FASTA)   NCBI Sequence Viewer  
  XP_038456885 (Get FASTA)   NCBI Sequence Viewer  
  XP_038456886 (Get FASTA)   NCBI Sequence Viewer  
  XP_038456887 (Get FASTA)   NCBI Sequence Viewer  
  XP_038456888 (Get FASTA)   NCBI Sequence Viewer  
  XP_038456889 (Get FASTA)   NCBI Sequence Viewer  
  XP_038456890 (Get FASTA)   NCBI Sequence Viewer  
  XP_038456891 (Get FASTA)   NCBI Sequence Viewer  
  XP_038521450 (Get FASTA)   NCBI Sequence Viewer  
  XP_038521451 (Get FASTA)   NCBI Sequence Viewer  
  XP_038521452 (Get FASTA)   NCBI Sequence Viewer  
  XP_038521453 (Get FASTA)   NCBI Sequence Viewer  
  XP_038521454 (Get FASTA)   NCBI Sequence Viewer  
  XP_038521455 (Get FASTA)   NCBI Sequence Viewer  
  XP_038521456 (Get FASTA)   NCBI Sequence Viewer  
  XP_038521458 (Get FASTA)   NCBI Sequence Viewer  
  XP_038521459 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005620071   ⟸   XM_005620014
- Peptide Label: isoform X1
- UniProtKB: E2QZL4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005620076   ⟸   XM_005620019
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_005620070   ⟸   XM_005620013
- Peptide Label: isoform X1
- UniProtKB: E2QZL4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013969056   ⟸   XM_014113581
- Peptide Label: isoform X1
- UniProtKB: E2QZL4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005620077   ⟸   XM_005620020
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_005620073   ⟸   XM_005620016
- Peptide Label: isoform X1
- UniProtKB: E2QZL4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022274262   ⟸   XM_022418554
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_022274263   ⟸   XM_022418555
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_022274264   ⟸   XM_022418556
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: ENSCAFP00000049949   ⟸   ENSCAFT00000073242
RefSeq Acc Id: ENSCAFP00000053411   ⟸   ENSCAFT00000063657
RefSeq Acc Id: ENSCAFP00000052341   ⟸   ENSCAFT00000082255
RefSeq Acc Id: ENSCAFP00000048954   ⟸   ENSCAFT00000065459
RefSeq Acc Id: ENSCAFP00000025043   ⟸   ENSCAFT00000026940
RefSeq Acc Id: XP_038331560   ⟸   XM_038475632
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038331558   ⟸   XM_038475630
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038331564   ⟸   XM_038475636
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038331561   ⟸   XM_038475633
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038331563   ⟸   XM_038475635
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038331562   ⟸   XM_038475634
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038331559   ⟸   XM_038475631
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038331557   ⟸   XM_038475629
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038331565   ⟸   XM_038475637
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038456886   ⟸   XM_038600958
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038456884   ⟸   XM_038600956
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038456890   ⟸   XM_038600962
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038456887   ⟸   XM_038600959
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038456889   ⟸   XM_038600961
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038456888   ⟸   XM_038600960
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038456885   ⟸   XM_038600957
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038456883   ⟸   XM_038600955
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038456891   ⟸   XM_038600963
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038521453   ⟸   XM_038665525
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038521451   ⟸   XM_038665523
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038521458   ⟸   XM_038665530
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038521454   ⟸   XM_038665526
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038521456   ⟸   XM_038665528
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038521455   ⟸   XM_038665527
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038521452   ⟸   XM_038665524
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038521450   ⟸   XM_038665522
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038521459   ⟸   XM_038665531
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038392736   ⟸   XM_038536808
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038392734   ⟸   XM_038536806
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038392740   ⟸   XM_038536812
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038392737   ⟸   XM_038536809
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038392739   ⟸   XM_038536811
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038392738   ⟸   XM_038536810
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038392735   ⟸   XM_038536807
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038392733   ⟸   XM_038536805
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038392741   ⟸   XM_038536813
- Peptide Label: isoform X4

Damaging Variants


Assembly: CanFam3.1

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain
5 33015383 33015384 C T snv Australian Terrier (AR001), Beagle (BE020), Pomeranian (ZS14_2), West Highland White Terrier (WW64), West Highland White Terrier (WW364), West Highland White Terrier (WW363), West Highland White Terrier (WW362), West Highland White Terrier (WW361), Shetland Sheepdog (SS004), Shetland Sheepdog (SRS932138), Malinois (MA324), Lagotto Romagnolo (LR494), Lagotto Romagnolo (LR390), Labrador Retriever (LA900), Labrador Retriever (LA882), Labrador Retriever (LA1869), Cairn Terrier (CE073), Miniature Bullterrier (BT007), Basset (BH003)
5 33016076 33016077 A G snv Lagotto Romagnolo (LR494), Chinese indigenous dogs (YJ7), Malinois (MA324), Lagotto Romagnolo (LR1030), Shetland Sheepdog (SRS932138), Lagotto Romagnolo (LR538), Shetland Sheepdog (SS004), Lagotto Romagnolo (LR654), West Highland White Terrier (WW361), Tibetan Mastiff (TM1), West Highland White Terrier (WW362), West Highland White Terrier (WW174), West Highland White Terrier (WW363), West Highland White Terrier (WW558), West Highland White Terrier (WW364), Chinese indigenous dogs (YJ1), West Highland White Terrier (WW64), Chinese indigenous dogs (YJ2), Pomeranian (ZS14_2), Cairn Terrier (CE073), Chow Chow (CW011), Chinese indigenous dogs (LJ8), Lagotto Romagnolo (LR390), Chinese indigenous dogs (LJ6), Labrador Retriever (LA900), Chinese indigenous dogs (LJ3), Labrador Retriever (LA882), Chinese indigenous dogs (LJ10), Labrador Retriever (LA1869), Eurasier (EU035), Eurasier (EU008), Miniature Bullterrier (BT007), Chinese indigenous dogs (DQ9), Chinese indigenous dogs (YJ9), Basset (BH003), Beagle (BE020), Australian Terrier (AR001), Chinese indigenous dogs (DQ1), Chinese indigenous dogs (LJ9)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000017008 Ensembl
NCBI Gene AURKB ENTREZGENE
UniProt E2QZL4 ENTREZGENE
VGNC ID VGNC:38312 ENTREZGENE