AATF (apoptosis antagonizing transcription factor) - Rat Genome Database

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Gene: AATF (apoptosis antagonizing transcription factor) Canis lupus familiaris
Analyze
Symbol: AATF
Name: apoptosis antagonizing transcription factor
RGD ID: 12251038
Description: ENCODES a protein that exhibits leucine zipper domain binding (ortholog); protein kinase binding (ortholog); tau protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); embryonic cleavage (ortholog); negative regulation of amyloid precursor protein biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); chromosome 17q12 deletion syndrome (ortholog); FOUND IN cytoplasm (inferred); nucleolus (inferred); nucleoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1936,773,313 - 36,878,752 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl936,773,312 - 36,878,745 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha935,998,704 - 36,107,988 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0937,583,095 - 37,693,391 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl937,582,958 - 37,689,359 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1936,364,898 - 36,474,825 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0936,652,569 - 36,762,368 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0936,739,791 - 36,849,296 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
AATF
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1936,773,313 - 36,878,752 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl936,773,312 - 36,878,745 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha935,998,704 - 36,107,988 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0937,583,095 - 37,693,391 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl937,582,958 - 37,689,359 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1936,364,898 - 36,474,825 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0936,652,569 - 36,762,368 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0936,739,791 - 36,849,296 (+)NCBIUU_Cfam_GSD_1.0
AATF
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381736,948,954 - 37,056,871 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1736,948,925 - 37,056,871 (+)EnsemblGRCh38hg38GRCh38
GRCh371735,306,254 - 35,414,171 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361732,380,288 - 32,488,284 (+)NCBINCBI36Build 36hg18NCBI36
Build 341732,380,370 - 32,488,283NCBI
Celera1732,128,305 - 32,236,266 (+)NCBICelera
Cytogenetic Map17q12NCBI
HuRef1731,242,118 - 31,349,732 (+)NCBIHuRef
CHM1_11735,340,438 - 35,448,434 (+)NCBICHM1_1
T2T-CHM13v2.01737,936,011 - 38,043,848 (+)NCBIT2T-CHM13v2.0
Aatf
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391184,313,682 - 84,404,433 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1184,313,681 - 84,404,348 (-)EnsemblGRCm39 Ensembl
GRCm381184,422,856 - 84,513,584 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1184,422,855 - 84,513,522 (-)EnsemblGRCm38mm10GRCm38
MGSCv371184,236,358 - 84,327,003 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361184,239,051 - 84,329,696 (-)NCBIMGSCv36mm8
Celera1194,034,340 - 94,126,318 (-)NCBICelera
Cytogenetic Map11CNCBI
cM Map1151.3NCBI
Aatf
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81069,796,502 - 69,889,671 (-)NCBIGRCr8
mRatBN7.21069,299,029 - 69,392,207 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1069,299,037 - 69,392,201 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1073,919,023 - 74,012,160 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01073,424,050 - 73,517,193 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01068,888,465 - 68,981,611 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01071,744,648 - 71,837,851 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1071,744,659 - 71,837,851 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01071,654,744 - 71,747,166 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41072,701,724 - 72,794,495 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11072,716,103 - 72,808,865 (-)NCBI
Celera1068,226,097 - 68,318,677 (-)NCBICelera
Cytogenetic Map10q26NCBI
Aatf
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955451929,510 - 1,033,492 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955451929,278 - 1,033,665 (-)NCBIChiLan1.0ChiLan1.0
AATF
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21927,706,527 - 27,808,516 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11729,588,204 - 29,690,174 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01720,027,351 - 20,129,255 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11720,325,282 - 20,426,359 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1720,325,282 - 20,426,359 (-)Ensemblpanpan1.1panPan2
Aatf
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560235,755,004 - 35,865,290 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364901,209,967 - 1,319,802 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364901,209,760 - 1,320,046 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AATF
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1238,461,830 - 38,564,306 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11238,461,809 - 38,563,537 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21240,078,719 - 40,180,472 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AATF
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11630,728,070 - 30,838,816 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1630,728,070 - 30,838,704 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660771,459,496 - 1,571,604 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aatf
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248713,965,985 - 4,079,281 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248713,966,323 - 4,078,970 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in AATF
827 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 4 1 22 6 6 6 6 2 12 8 10 6
Low 1 4 4
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003639300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038486210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038486211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038486212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038486213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038486214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038486215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038486216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038486217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038548035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038608869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038608876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038611996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038611997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038611998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038611999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038612003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038677242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038677243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038677244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038677245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038677246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038677247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038677248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038677249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000028358   ⟹   ENSCAFP00000026373
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl936,773,312 - 36,878,745 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000048352   ⟹   ENSCAFP00000036644
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl936,773,312 - 36,878,593 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845011923   ⟹   ENSCAFP00845009302
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl937,582,958 - 37,689,359 (+)Ensembl
RefSeq Acc Id: XM_003639300   ⟹   XP_003639348
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1936,773,314 - 36,870,723 (+)NCBI
Dog10K_Boxer_Tasha935,998,705 - 36,095,932 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022423272   ⟹   XP_022278980
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1936,773,313 - 36,878,752 (+)NCBI
Dog10K_Boxer_Tasha935,998,704 - 36,103,960 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022423273   ⟹   XP_022278981
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1936,773,313 - 36,878,752 (+)NCBI
Dog10K_Boxer_Tasha935,998,704 - 36,103,960 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022423274   ⟹   XP_022278982
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1936,773,316 - 36,878,752 (+)NCBI
Dog10K_Boxer_Tasha935,998,706 - 36,103,960 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022423275   ⟹   XP_022278983
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1936,773,314 - 36,867,408 (+)NCBI
Dog10K_Boxer_Tasha935,998,705 - 36,092,616 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022423277   ⟹   XP_022278985
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1936,773,315 - 36,869,019 (+)NCBI
Dog10K_Boxer_Tasha935,998,705 - 36,094,227 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038486210   ⟹   XP_038342138
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1936,364,898 - 36,470,799 (+)NCBI
RefSeq Acc Id: XM_038486211   ⟹   XP_038342139
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1936,364,898 - 36,470,799 (+)NCBI
RefSeq Acc Id: XM_038486212   ⟹   XP_038342140
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1936,364,900 - 36,470,799 (+)NCBI
RefSeq Acc Id: XM_038486213   ⟹   XP_038342141
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1936,364,899 - 36,462,338 (+)NCBI
RefSeq Acc Id: XM_038486214   ⟹   XP_038342142
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1936,364,899 - 36,459,024 (+)NCBI
RefSeq Acc Id: XM_038486215   ⟹   XP_038342143
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1936,364,899 - 36,460,635 (+)NCBI
RefSeq Acc Id: XM_038486216   ⟹   XP_038342144
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1936,364,899 - 36,474,825 (+)NCBI
RefSeq Acc Id: XM_038486217   ⟹   XP_038342145
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1936,364,899 - 36,445,927 (+)NCBI
RefSeq Acc Id: XM_038548028   ⟹   XP_038403956
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0936,739,791 - 36,845,277 (+)NCBI
RefSeq Acc Id: XM_038548029   ⟹   XP_038403957
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0936,739,791 - 36,845,277 (+)NCBI
RefSeq Acc Id: XM_038548030   ⟹   XP_038403958
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0936,739,792 - 36,845,277 (+)NCBI
RefSeq Acc Id: XM_038548031   ⟹   XP_038403959
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0936,739,792 - 36,837,251 (+)NCBI
RefSeq Acc Id: XM_038548032   ⟹   XP_038403960
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0936,739,792 - 36,833,934 (+)NCBI
RefSeq Acc Id: XM_038548033   ⟹   XP_038403961
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0936,739,792 - 36,835,545 (+)NCBI
RefSeq Acc Id: XM_038548034   ⟹   XP_038403962
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0936,739,792 - 36,849,296 (+)NCBI
RefSeq Acc Id: XM_038548035   ⟹   XP_038403963
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0936,739,792 - 36,820,859 (+)NCBI
RefSeq Acc Id: XM_038608869   ⟹   XP_038464797
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha935,998,705 - 36,107,988 (+)NCBI
RefSeq Acc Id: XM_038608876   ⟹   XP_038464804
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha935,998,705 - 36,079,537 (+)NCBI
RefSeq Acc Id: XM_038611996   ⟹   XP_038467924
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0936,652,569 - 36,758,337 (+)NCBI
RefSeq Acc Id: XM_038611997   ⟹   XP_038467925
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0936,652,569 - 36,758,337 (+)NCBI
RefSeq Acc Id: XM_038611998   ⟹   XP_038467926
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0936,652,571 - 36,758,337 (+)NCBI
RefSeq Acc Id: XM_038611999   ⟹   XP_038467927
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0936,652,570 - 36,750,151 (+)NCBI
RefSeq Acc Id: XM_038612000   ⟹   XP_038467928
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0936,652,570 - 36,746,837 (+)NCBI
RefSeq Acc Id: XM_038612001   ⟹   XP_038467929
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0936,652,570 - 36,748,448 (+)NCBI
RefSeq Acc Id: XM_038612002   ⟹   XP_038467930
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0936,652,570 - 36,762,368 (+)NCBI
RefSeq Acc Id: XM_038612003   ⟹   XP_038467931
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0936,652,570 - 36,733,735 (+)NCBI
RefSeq Acc Id: XM_038677242   ⟹   XP_038533170
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0937,583,095 - 37,689,363 (+)NCBI
RefSeq Acc Id: XM_038677243   ⟹   XP_038533171
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0937,583,095 - 37,689,363 (+)NCBI
RefSeq Acc Id: XM_038677244   ⟹   XP_038533172
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0937,583,097 - 37,689,363 (+)NCBI
RefSeq Acc Id: XM_038677245   ⟹   XP_038533173
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0937,583,096 - 37,680,894 (+)NCBI
RefSeq Acc Id: XM_038677246   ⟹   XP_038533174
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0937,583,096 - 37,677,580 (+)NCBI
RefSeq Acc Id: XM_038677247   ⟹   XP_038533175
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0937,583,096 - 37,679,191 (+)NCBI
RefSeq Acc Id: XM_038677248   ⟹   XP_038533176
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0937,583,096 - 37,693,391 (+)NCBI
RefSeq Acc Id: XM_038677249   ⟹   XP_038533177
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0937,583,096 - 37,664,487 (+)NCBI
Protein Sequences
Protein RefSeqs XP_003639348 (Get FASTA)   NCBI Sequence Viewer  
  XP_022278980 (Get FASTA)   NCBI Sequence Viewer  
  XP_022278981 (Get FASTA)   NCBI Sequence Viewer  
  XP_022278982 (Get FASTA)   NCBI Sequence Viewer  
  XP_022278983 (Get FASTA)   NCBI Sequence Viewer  
  XP_022278985 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342138 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342139 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342140 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342141 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342142 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342143 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342144 (Get FASTA)   NCBI Sequence Viewer  
  XP_038342145 (Get FASTA)   NCBI Sequence Viewer  
  XP_038403956 (Get FASTA)   NCBI Sequence Viewer  
  XP_038403957 (Get FASTA)   NCBI Sequence Viewer  
  XP_038403958 (Get FASTA)   NCBI Sequence Viewer  
  XP_038403959 (Get FASTA)   NCBI Sequence Viewer  
  XP_038403960 (Get FASTA)   NCBI Sequence Viewer  
  XP_038403961 (Get FASTA)   NCBI Sequence Viewer  
  XP_038403962 (Get FASTA)   NCBI Sequence Viewer  
  XP_038403963 (Get FASTA)   NCBI Sequence Viewer  
  XP_038464797 (Get FASTA)   NCBI Sequence Viewer  
  XP_038464804 (Get FASTA)   NCBI Sequence Viewer  
  XP_038467924 (Get FASTA)   NCBI Sequence Viewer  
  XP_038467925 (Get FASTA)   NCBI Sequence Viewer  
  XP_038467926 (Get FASTA)   NCBI Sequence Viewer  
  XP_038467927 (Get FASTA)   NCBI Sequence Viewer  
  XP_038467928 (Get FASTA)   NCBI Sequence Viewer  
  XP_038467929 (Get FASTA)   NCBI Sequence Viewer  
  XP_038467930 (Get FASTA)   NCBI Sequence Viewer  
  XP_038467931 (Get FASTA)   NCBI Sequence Viewer  
  XP_038533170 (Get FASTA)   NCBI Sequence Viewer  
  XP_038533171 (Get FASTA)   NCBI Sequence Viewer  
  XP_038533172 (Get FASTA)   NCBI Sequence Viewer  
  XP_038533173 (Get FASTA)   NCBI Sequence Viewer  
  XP_038533174 (Get FASTA)   NCBI Sequence Viewer  
  XP_038533175 (Get FASTA)   NCBI Sequence Viewer  
  XP_038533176 (Get FASTA)   NCBI Sequence Viewer  
  XP_038533177 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000026373.3
  ENSCAFP00040004814.1
  ENSCAFP00040004832.1
  ENSCAFP00845009302
  ENSCAFP00845009302.1
RefSeq Acc Id: XP_003639348   ⟸   XM_003639300
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_022278980   ⟸   XM_022423272
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PZT3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022278981   ⟸   XM_022423273
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_022278983   ⟸   XM_022423275
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_022278985   ⟸   XM_022423277
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_022278982   ⟸   XM_022423274
- Peptide Label: isoform X3
- UniProtKB: A0A8C0JPR9 (UniProtKB/TrEMBL),   A0A8C0Q0L4 (UniProtKB/TrEMBL),   A0A8I3N0N4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000026373   ⟸   ENSCAFT00000028358
RefSeq Acc Id: ENSCAFP00000036644   ⟸   ENSCAFT00000048352
RefSeq Acc Id: XP_038342138   ⟸   XM_038486210
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038342139   ⟸   XM_038486211
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038342144   ⟸   XM_038486216
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038342141   ⟸   XM_038486213
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038342143   ⟸   XM_038486215
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038342142   ⟸   XM_038486214
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038342145   ⟸   XM_038486217
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038342140   ⟸   XM_038486212
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038467924   ⟸   XM_038611996
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038467925   ⟸   XM_038611997
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038467930   ⟸   XM_038612002
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038467927   ⟸   XM_038611999
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038467929   ⟸   XM_038612001
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038467928   ⟸   XM_038612000
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038467931   ⟸   XM_038612003
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038467926   ⟸   XM_038611998
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038533170   ⟸   XM_038677242
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PZT3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038533171   ⟸   XM_038677243
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038533176   ⟸   XM_038677248
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038533173   ⟸   XM_038677245
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038533175   ⟸   XM_038677247
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038533174   ⟸   XM_038677246
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038533177   ⟸   XM_038677249
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038533172   ⟸   XM_038677244
- Peptide Label: isoform X3
- UniProtKB: A0A8C0JPR9 (UniProtKB/TrEMBL),   A0A8C0Q0L4 (UniProtKB/TrEMBL),   A0A8I3N0N4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038464797   ⟸   XM_038608869
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038464804   ⟸   XM_038608876
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038403956   ⟸   XM_038548028
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038403957   ⟸   XM_038548029
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038403962   ⟸   XM_038548034
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038403958   ⟸   XM_038548030
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038403959   ⟸   XM_038548031
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038403961   ⟸   XM_038548033
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038403960   ⟸   XM_038548032
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038403963   ⟸   XM_038548035
- Peptide Label: isoform X8
RefSeq Acc Id: ENSCAFP00845009302   ⟸   ENSCAFT00845011923
Promoters
RGD ID:13684634
Promoter ID:EPDNEW_C2702
Type:initiation region
Name:AATF_1
Description:apoptosis antagonizing transcription factor
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1936,773,345 - 36,773,405EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000017869 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00040002949 UniProtKB/TrEMBL
  ENSCAFG00845006720 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000028358.6 UniProtKB/TrEMBL
  ENSCAFT00040005592.1 UniProtKB/TrEMBL
  ENSCAFT00040005615.1 UniProtKB/TrEMBL
  ENSCAFT00845011923 ENTREZGENE
  ENSCAFT00845011923.1 UniProtKB/TrEMBL
InterPro AATF UniProtKB/TrEMBL
  AATF/Bfr2 UniProtKB/TrEMBL
  AATF_C UniProtKB/TrEMBL
NCBI Gene AATF ENTREZGENE
PANTHER PROTEIN AATF UniProtKB/TrEMBL
  PTHR15565 UniProtKB/TrEMBL
Pfam AATF-Che1 UniProtKB/TrEMBL
  TRAUB UniProtKB/TrEMBL
UniProt A0A8C0JPR9 ENTREZGENE
  A0A8C0PZT3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0Q0L4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3N0N4 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:37420 ENTREZGENE