RASEF (RAS and EF-hand domain containing) - Rat Genome Database

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Gene: RASEF (RAS and EF-hand domain containing) Canis lupus familiaris
Analyze
Symbol: RASEF
Name: RAS and EF-hand domain containing
RGD ID: 12245654
Description: ENCODES a protein that exhibits calcium ion binding (inferred); GDP binding (inferred); GTP binding (inferred); INVOLVED IN vesicle-mediated transport (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytosol (inferred); perinuclear region of cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1176,257,108 - 76,468,515 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl176,391,186 - 76,466,651 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha176,909,496 - 77,120,665 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0176,565,886 - 76,777,693 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl176,700,215 - 76,775,828 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1176,379,667 - 76,592,170 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0176,275,069 - 76,351,612 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0176,840,803 - 77,053,408 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
RASEF
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1176,257,108 - 76,468,515 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl176,391,186 - 76,466,651 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha176,909,496 - 77,120,665 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0176,565,886 - 76,777,693 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl176,700,215 - 76,775,828 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1176,379,667 - 76,592,170 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0176,275,069 - 76,351,612 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0176,840,803 - 77,053,408 (+)NCBIUU_Cfam_GSD_1.0
RASEF
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38982,979,590 - 83,219,224 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl982,979,590 - 83,063,177 (-)EnsemblGRCh38hg38GRCh38
GRCh37985,594,505 - 85,678,057 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36984,787,135 - 84,867,863 (-)NCBINCBI36Build 36hg18NCBI36
Build 34982,826,877 - 82,907,597NCBI
Celera956,167,301 - 56,247,219 (-)NCBICelera
Cytogenetic Map9q21.32NCBI
HuRef955,419,509 - 55,502,961 (-)NCBIHuRef
CHM1_1985,741,051 - 85,824,644 (-)NCBICHM1_1
T2T-CHM13v2.0995,129,181 - 95,212,707 (-)NCBIT2T-CHM13v2.0
Rasef
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39473,632,814 - 73,709,382 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl473,632,816 - 73,709,231 (-)EnsemblGRCm39 Ensembl
GRCm38473,714,577 - 73,791,236 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl473,714,579 - 73,790,994 (-)EnsemblGRCm38mm10GRCm38
MGSCv37473,360,483 - 73,436,506 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36473,185,810 - 73,261,833 (-)NCBIMGSCv36mm8
Celera472,287,509 - 72,364,841 (-)NCBICelera
Cytogenetic Map4C3NCBI
cM Map436.06NCBI
Rasef
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8592,595,148 - 92,665,526 (-)NCBIGRCr8
mRatBN7.2587,548,908 - 87,619,286 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl587,548,908 - 87,619,031 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx589,987,539 - 90,057,349 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0591,816,567 - 91,886,381 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0591,792,076 - 91,868,131 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0590,419,044 - 90,488,882 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl590,419,020 - 90,488,896 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0594,480,339 - 94,550,121 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4591,528,617 - 91,642,374 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera586,274,733 - 86,344,463 (-)NCBICelera
Cytogenetic Map5q31NCBI
Rasef
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_004955530690,748 - 747,415 (+)NCBIChiLan1.0ChiLan1.0
RASEF
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21182,144,238 - 82,221,534 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1982,150,182 - 82,227,478 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0941,815,989 - 41,893,302 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1981,923,829 - 82,000,739 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl981,923,834 - 82,001,272 (-)Ensemblpanpan1.1panPan2
Rasef
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947123,293,536 - 123,360,592 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936632115,008 - 181,990 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936632114,969 - 179,642 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RASEF
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11031,929,121 - 32,012,183 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21036,103,563 - 36,158,619 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RASEF
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11293,799,064 - 93,876,163 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1293,802,158 - 93,875,908 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603882,209,533 - 82,288,832 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rasef
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462481110,848,490 - 10,926,493 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462481110,844,717 - 10,926,558 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in RASEF
2564 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 2 11 1 6 10
Low 3 5 2 1 3 1 5 4 8 2
Below cutoff 9 5 3 5 2 6 4

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005615822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005615823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022420727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022420731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022420737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022420739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022420745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022420750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022420754 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022420756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038576141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038576329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038591302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038655097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038655098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038655099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038655100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038655101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038655102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038655103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038655104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_541269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000002269   ⟹   ENSCAFP00000002105
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl176,391,186 - 76,466,651 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000073467   ⟹   ENSCAFP00000059543
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl176,391,186 - 76,466,651 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000079028   ⟹   ENSCAFP00000052944
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl176,391,186 - 76,466,651 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000087886   ⟹   ENSCAFP00000065420
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl176,391,186 - 76,466,651 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845011951   ⟹   ENSCAFP00845009326
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl176,700,215 - 76,775,828 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845012037   ⟹   ENSCAFP00845009395
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl176,700,215 - 76,775,828 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845012106   ⟹   ENSCAFP00845009455
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl176,700,215 - 76,775,828 (+)Ensembl
RefSeq Acc Id: XM_005615823   ⟹   XP_005615880
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1176,258,816 - 76,468,515 (+)NCBI
Dog10K_Boxer_Tasha176,911,177 - 77,120,665 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022420731   ⟹   XP_022276439
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1176,258,816 - 76,468,515 (+)NCBI
Dog10K_Boxer_Tasha176,911,177 - 77,120,665 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022420745   ⟹   XP_022276453
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1176,258,816 - 76,468,515 (+)NCBI
Dog10K_Boxer_Tasha176,911,177 - 77,120,665 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022420754   ⟹   XP_022276462
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1176,258,816 - 76,468,515 (+)NCBI
Dog10K_Boxer_Tasha176,911,177 - 77,120,665 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022420756   ⟹   XP_022276464
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1176,257,108 - 76,468,515 (+)NCBI
Dog10K_Boxer_Tasha176,909,496 - 77,120,665 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038466295   ⟹   XP_038322223
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1176,515,725 - 76,592,170 (+)NCBI
RefSeq Acc Id: XM_038466296   ⟹   XP_038322224
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1176,381,391 - 76,592,170 (+)NCBI
RefSeq Acc Id: XM_038466297   ⟹   XP_038322225
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1176,475,075 - 76,592,170 (+)NCBI
RefSeq Acc Id: XM_038466298   ⟹   XP_038322226
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1176,381,391 - 76,592,170 (+)NCBI
RefSeq Acc Id: XM_038466300   ⟹   XP_038322228
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1176,381,391 - 76,592,170 (+)NCBI
RefSeq Acc Id: XM_038466301   ⟹   XP_038322229
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1176,475,075 - 76,592,170 (+)NCBI
RefSeq Acc Id: XM_038466302   ⟹   XP_038322230
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1176,381,391 - 76,592,170 (+)NCBI
RefSeq Acc Id: XM_038466303   ⟹   XP_038322231
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1176,379,667 - 76,592,170 (+)NCBI
RefSeq Acc Id: XM_038526990   ⟹   XP_038382918
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0176,976,991 - 77,053,408 (+)NCBI
RefSeq Acc Id: XM_038526991   ⟹   XP_038382919
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0176,842,526 - 77,053,408 (+)NCBI
RefSeq Acc Id: XM_038526992   ⟹   XP_038382920
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0176,936,290 - 77,053,408 (+)NCBI
RefSeq Acc Id: XM_038526993   ⟹   XP_038382921
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0176,842,526 - 77,053,408 (+)NCBI
RefSeq Acc Id: XM_038526994   ⟹   XP_038382922
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0176,842,526 - 77,053,408 (+)NCBI
RefSeq Acc Id: XM_038526995   ⟹   XP_038382923
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0176,936,290 - 77,053,408 (+)NCBI
RefSeq Acc Id: XM_038526996   ⟹   XP_038382924
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0176,842,526 - 77,053,408 (+)NCBI
RefSeq Acc Id: XM_038526997   ⟹   XP_038382925
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0176,840,803 - 77,053,408 (+)NCBI
RefSeq Acc Id: XM_038576141   ⟹   XP_038432069
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha177,003,689 - 77,120,665 (+)NCBI
RefSeq Acc Id: XM_038576329   ⟹   XP_038432257
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha177,003,689 - 77,120,665 (+)NCBI
RefSeq Acc Id: XM_038591302   ⟹   XP_038447230
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0176,275,069 - 76,351,612 (+)NCBI
RefSeq Acc Id: XM_038655097   ⟹   XP_038511025
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0176,701,087 - 76,777,693 (+)NCBI
RefSeq Acc Id: XM_038655098   ⟹   XP_038511026
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0176,567,569 - 76,777,693 (+)NCBI
RefSeq Acc Id: XM_038655099   ⟹   XP_038511027
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0176,660,418 - 76,777,693 (+)NCBI
RefSeq Acc Id: XM_038655100   ⟹   XP_038511028
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0176,567,569 - 76,777,693 (+)NCBI
RefSeq Acc Id: XM_038655101   ⟹   XP_038511029
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0176,567,569 - 76,777,693 (+)NCBI
RefSeq Acc Id: XM_038655102   ⟹   XP_038511030
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0176,660,418 - 76,777,693 (+)NCBI
RefSeq Acc Id: XM_038655103   ⟹   XP_038511031
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0176,567,569 - 76,777,693 (+)NCBI
RefSeq Acc Id: XM_038655104   ⟹   XP_038511032
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0176,565,886 - 76,777,693 (+)NCBI
RefSeq Acc Id: XM_541269   ⟹   XP_541269
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1176,392,043 - 76,468,515 (+)NCBI
Dog10K_Boxer_Tasha177,044,359 - 77,120,665 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005615880 (Get FASTA)   NCBI Sequence Viewer  
  XP_022276439 (Get FASTA)   NCBI Sequence Viewer  
  XP_022276453 (Get FASTA)   NCBI Sequence Viewer  
  XP_022276462 (Get FASTA)   NCBI Sequence Viewer  
  XP_022276464 (Get FASTA)   NCBI Sequence Viewer  
  XP_038322223 (Get FASTA)   NCBI Sequence Viewer  
  XP_038322224 (Get FASTA)   NCBI Sequence Viewer  
  XP_038322225 (Get FASTA)   NCBI Sequence Viewer  
  XP_038322226 (Get FASTA)   NCBI Sequence Viewer  
  XP_038322228 (Get FASTA)   NCBI Sequence Viewer  
  XP_038322229 (Get FASTA)   NCBI Sequence Viewer  
  XP_038322230 (Get FASTA)   NCBI Sequence Viewer  
  XP_038322231 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382918 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382919 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382920 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382921 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382922 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382923 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382924 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382925 (Get FASTA)   NCBI Sequence Viewer  
  XP_038432069 (Get FASTA)   NCBI Sequence Viewer  
  XP_038432257 (Get FASTA)   NCBI Sequence Viewer  
  XP_038447230 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511025 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511026 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511027 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511028 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511029 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511030 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511031 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511032 (Get FASTA)   NCBI Sequence Viewer  
  XP_541269 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000002105.4
  ENSCAFP00000052944.2
  ENSCAFP00000059543.2
  ENSCAFP00030006041.1
  ENSCAFP00845009326
  ENSCAFP00845009326.1
  ENSCAFP00845009395.1
  ENSCAFP00845009455.1
Reference Protein Sequences
RefSeq Acc Id: XP_005615880   ⟸   XM_005615823
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_541269   ⟸   XM_541269
- Peptide Label: isoform X1
- UniProtKB: A0A8P0S7E4 (UniProtKB/TrEMBL),   A0A8C0MBA7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022276464   ⟸   XM_022420756
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022276462   ⟸   XM_022420754
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022276439   ⟸   XM_022420731
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022276453   ⟸   XM_022420745
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000052944   ⟸   ENSCAFT00000079028
RefSeq Acc Id: ENSCAFP00000065420   ⟸   ENSCAFT00000087886
RefSeq Acc Id: ENSCAFP00000059543   ⟸   ENSCAFT00000073467
RefSeq Acc Id: ENSCAFP00000002105   ⟸   ENSCAFT00000002269
RefSeq Acc Id: XP_038322231   ⟸   XM_038466303
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038322230   ⟸   XM_038466302
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038322226   ⟸   XM_038466298
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038322224   ⟸   XM_038466296
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038322228   ⟸   XM_038466300
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038322225   ⟸   XM_038466297
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038322229   ⟸   XM_038466301
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038322223   ⟸   XM_038466295
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038447230   ⟸   XM_038591302
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038511032   ⟸   XM_038655104
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038511031   ⟸   XM_038655103
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038511028   ⟸   XM_038655100
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038511026   ⟸   XM_038655098
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038511029   ⟸   XM_038655101
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038511027   ⟸   XM_038655099
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038511030   ⟸   XM_038655102
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038511025   ⟸   XM_038655097
- Peptide Label: isoform X1
- UniProtKB: A0A8I3N0Q0 (UniProtKB/TrEMBL),   A0A8C0MBA7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038432069   ⟸   XM_038576141
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038432257   ⟸   XM_038576329
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038382925   ⟸   XM_038526997
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038382924   ⟸   XM_038526996
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038382921   ⟸   XM_038526993
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038382919   ⟸   XM_038526991
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038382922   ⟸   XM_038526994
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038382920   ⟸   XM_038526992
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038382923   ⟸   XM_038526995
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LIA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038382918   ⟸   XM_038526990
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MBA7 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845009326   ⟸   ENSCAFT00845011951
RefSeq Acc Id: ENSCAFP00845009395   ⟸   ENSCAFT00845012037
RefSeq Acc Id: ENSCAFP00845009455   ⟸   ENSCAFT00845012106
Protein Domains
EF-hand


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000001453 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030003650 UniProtKB/TrEMBL
  ENSCAFG00845006700 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000002269.5 UniProtKB/TrEMBL
  ENSCAFT00000073467.2 UniProtKB/TrEMBL
  ENSCAFT00000079028.2 UniProtKB/TrEMBL
  ENSCAFT00030006877.1 UniProtKB/TrEMBL
  ENSCAFT00845011951 ENTREZGENE
  ENSCAFT00845011951.1 UniProtKB/TrEMBL
  ENSCAFT00845012037.1 UniProtKB/TrEMBL
  ENSCAFT00845012106.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.1490 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
  EF-hand UniProtKB/TrEMBL
InterPro EF-hand-dom_pair UniProtKB/TrEMBL
  EF_Hand_1_Ca_BS UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  Small_GTP-bd_dom UniProtKB/TrEMBL
  Small_GTPase UniProtKB/TrEMBL
NCBI Gene RASEF ENTREZGENE
PANTHER RAS AND EF-HAND DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  RAS-RELATED PROTEIN RAB UniProtKB/TrEMBL
Pfam EF-hand_7 UniProtKB/TrEMBL
  Ras UniProtKB/TrEMBL
PRINTS RASTRNSFRMNG UniProtKB/TrEMBL
PROSITE EF_HAND_1 UniProtKB/TrEMBL
  EF_HAND_2 UniProtKB/TrEMBL
  RAB UniProtKB/TrEMBL
  RAS UniProtKB/TrEMBL
  RHO UniProtKB/TrEMBL
SMART ARF UniProtKB/TrEMBL
  EFh UniProtKB/TrEMBL
  RAB UniProtKB/TrEMBL
  RAN UniProtKB/TrEMBL
  RAS UniProtKB/TrEMBL
  RHO UniProtKB/TrEMBL
Superfamily-SCOP SSF47473 UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
UniProt A0A8C0LIA4 ENTREZGENE
  A0A8C0MBA7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3N0Q0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3RUZ8_CANLF UniProtKB/TrEMBL
  A0A8I3RV08_CANLF UniProtKB/TrEMBL
  A0A8P0S7E4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0T5G2_CANLF UniProtKB/TrEMBL
  A0A8P0TBG5_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:45366 ENTREZGENE