LOC102153005 (putative spermatogenesis-associated protein 31C2) - Rat Genome Database

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Gene: LOC102153005 (putative spermatogenesis-associated protein 31C2) Canis lupus familiaris
Analyze
Symbol: LOC102153005
Name: putative spermatogenesis-associated protein 31C2
RGD ID: 12244864
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: SPATA31 subfamily C member 2; SPATA31C2; spermatogenesis-associated protein 31A6; spermatogenesis-associated protein 31C2; spermatogenesis-associated protein 31E1
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1194,823,506 - 94,829,551 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha195,271,573 - 95,277,598 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0195,424,269 - 95,430,294 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1195,042,227 - 95,054,317 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0194,768,206 - 94,807,229 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0195,530,523 - 95,551,930 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC102153005
124 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_038458955   ⟹   XP_038314883
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha195,271,573 - 95,277,598 (+)NCBI
RefSeq Acc Id: XM_038466584   ⟹   XP_038322512
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1195,042,227 - 95,054,317 (+)NCBI
RefSeq Acc Id: XM_038525511   ⟹   XP_038381439
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0195,530,523 - 95,551,930 (+)NCBI
RefSeq Acc Id: XM_038589928   ⟹   XP_038445856
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0194,768,206 - 94,807,229 (+)NCBI
RefSeq Acc Id: XM_038653625   ⟹   XP_038509553
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0195,424,269 - 95,430,294 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_038322512   ⟸   XM_038466584
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038445856   ⟸   XM_038589928
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038509553   ⟸   XM_038653625
- Peptide Label: isoform X1
- UniProtKB: A0A8I3S2G3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038314883   ⟸   XM_038458955
- Peptide Label: isoform X1
- UniProtKB: A0A8P0PKN2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038381439   ⟸   XM_038525511
- Peptide Label: isoform X4
Protein Domains
SPATA31


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000042306 UniProtKB/TrEMBL
  ENSCAFG00845017090 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000071241.2 UniProtKB/TrEMBL
  ENSCAFT00845030245.1 UniProtKB/TrEMBL
InterPro SPATA31 UniProtKB/TrEMBL
NCBI Gene SPATA31C2 ENTREZGENE
PANTHER ACROSOME-SPECIFIC PROTEIN UniProtKB/TrEMBL
  C2H2-TYPE DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam FAM75 UniProtKB/TrEMBL
UniProt A0A8I3S2G3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PKN2 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-12 LOC102153005  putative spermatogenesis-associated protein 31C2  LOC102153005  spermatogenesis-associated protein 31E1  Symbol and/or name change 5135510 APPROVED
2017-09-12 LOC102153005  spermatogenesis-associated protein 31E1  SPATA31C2  SPATA31 subfamily C member 2  Symbol and/or name change 5135510 APPROVED