BCAP31 (B cell receptor associated protein 31) - Rat Genome Database

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Gene: BCAP31 (B cell receptor associated protein 31) Canis lupus familiaris
Analyze
Symbol: BCAP31
Name: B cell receptor associated protein 31
RGD ID: 12244428
Description: ENCODES a protein that exhibits MHC class I protein binding (inferred); protein-containing complex binding (inferred); INVOLVED IN positive regulation of retrograde protein transport, ER to cytosol; endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); immune response (ortholog); ASSOCIATED WITH adrenoleukodystrophy (ortholog); autistic disorder (ortholog); creatine transporter deficiency (ortholog); FOUND IN clathrin-coated vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: B-cell receptor associated protein 31; B-cell receptor-associated protein 31
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X121,515,417 - 121,550,373 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX121,507,084 - 121,545,263 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX106,844,790 - 106,879,849 (-)NCBI
ROS_Cfam_1.0X124,656,935 - 124,692,012 (-)NCBI
UMICH_Zoey_3.1X120,426,370 - 120,461,432 (-)NCBI
UNSW_CanFamBas_1.0X122,941,327 - 122,976,452 (-)NCBI
UU_Cfam_GSD_1.0X122,703,489 - 122,738,554 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Genomics

Comparative Map Data
BCAP31
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X121,515,417 - 121,550,373 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX121,507,084 - 121,545,263 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX106,844,790 - 106,879,849 (-)NCBI
ROS_Cfam_1.0X124,656,935 - 124,692,012 (-)NCBI
UMICH_Zoey_3.1X120,426,370 - 120,461,432 (-)NCBI
UNSW_CanFamBas_1.0X122,941,327 - 122,976,452 (-)NCBI
UU_Cfam_GSD_1.0X122,703,489 - 122,738,554 (-)NCBI
BCAP31
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 EnsemblX153,700,492 - 153,724,565 (-)EnsemblGRCh38hg38GRCh38
GRCh38X153,700,492 - 153,724,746 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X152,965,947 - 152,989,842 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X152,619,146 - 152,643,081 (-)NCBINCBI36hg18NCBI36
Build 34X152,486,798 - 152,510,734NCBI
CeleraX153,199,631 - 153,223,882 (-)NCBI
Cytogenetic MapXq28NCBI
HuRefX141,623,032 - 141,647,457 (-)NCBIHuRef
CHM1_1X152,840,359 - 152,864,610 (-)NCBICHM1_1
Bcap31
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X72,729,784 - 72,761,421 (-)NCBIGRCm39mm39
GRCm39 EnsemblX72,729,784 - 72,759,781 (-)Ensembl
GRCm38X73,686,178 - 73,717,815 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX73,686,178 - 73,716,175 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X70,931,522 - 70,961,514 (-)NCBIGRCm37mm9NCBIm37
MGSCv36X69,938,903 - 69,968,895 (-)NCBImm8
CeleraX64,939,998 - 64,969,873 (-)NCBICelera
Cytogenetic MapXA7.3NCBI
Bcap31
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X151,397,567 - 151,429,666 (-)NCBI
Rnor_6.0 EnsemblX157,095,937 - 157,126,393 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0X157,094,365 - 157,126,397 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01152,843,762 - 152,875,715 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X159,583,683 - 159,614,143 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1X159,658,111 - 159,688,572 (-)NCBI
Celera1136,461,516 - 136,491,976 (+)NCBICelera
Cytogenetic MapXq37NCBI
Bcap31
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955580428,644 - 459,168 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955580429,223 - 459,168 (-)NCBIChiLan1.0ChiLan1.0
LOC100976022
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1X153,137,992 - 153,161,628 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX153,137,992 - 153,161,628 (-)Ensemblpanpan1.1panPan2
Bcap31
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X118,844,918 - 118,877,048 (-)NCBI
SpeTri2.0NW_004936809582,689 - 614,800 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BCAP31
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX124,457,001 - 124,484,743 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X124,456,999 - 124,484,923 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X142,021,546 - 142,049,432 (-)NCBISscrofa10.2Sscrofa10.2susScr3
BCAP31
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X128,128,739 - 128,152,617 (-)NCBI
ChlSab1.1 EnsemblX128,128,271 - 128,151,823 (-)Ensembl
Bcap31
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624946398,901 - 420,767 (-)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 22 6 6 6 6 6 12 8 10 6
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005641995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005641996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022415555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038451228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038464269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038524691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038524692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038524693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038524694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038524695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038588656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038588657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038588658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038588659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038588660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038653177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038653178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038653179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038653180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038653181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_538200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000003882   ⟹   ENSCAFP00000031361
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX121,507,084 - 121,545,263 (-)Ensembl
RefSeq Acc Id: XM_005641995   ⟹   XP_005642052
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X121,515,417 - 121,544,714 (-)NCBI
Dog10K_Boxer_TashaX106,844,790 - 106,874,081 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005641996   ⟹   XP_005642053
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X121,515,417 - 121,545,159 (-)NCBI
Dog10K_Boxer_TashaX106,844,790 - 106,874,523 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022415555   ⟹   XP_022271263
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X121,515,417 - 121,550,373 (-)NCBI
Dog10K_Boxer_TashaX106,844,790 - 106,879,849 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038451224   ⟹   XP_038307152
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X124,656,935 - 124,685,884 (-)NCBI
RefSeq Acc Id: XM_038451225   ⟹   XP_038307153
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X124,656,935 - 124,686,877 (-)NCBI
RefSeq Acc Id: XM_038451226   ⟹   XP_038307154
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X124,656,935 - 124,692,012 (-)NCBI
RefSeq Acc Id: XM_038451227   ⟹   XP_038307155
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X124,656,935 - 124,686,675 (-)NCBI
RefSeq Acc Id: XM_038451228   ⟹   XP_038307156
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X124,656,935 - 124,686,233 (-)NCBI
RefSeq Acc Id: XM_038464269   ⟹   XP_038320197
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_TashaX106,844,790 - 106,873,732 (-)NCBI
RefSeq Acc Id: XM_038524691   ⟹   XP_038380619
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X120,426,370 - 120,455,315 (-)NCBI
RefSeq Acc Id: XM_038524692   ⟹   XP_038380620
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X120,426,370 - 120,456,308 (-)NCBI
RefSeq Acc Id: XM_038524693   ⟹   XP_038380621
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X120,426,370 - 120,461,432 (-)NCBI
RefSeq Acc Id: XM_038524694   ⟹   XP_038380622
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X120,426,370 - 120,456,106 (-)NCBI
RefSeq Acc Id: XM_038524695   ⟹   XP_038380623
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X120,426,370 - 120,455,664 (-)NCBI
RefSeq Acc Id: XM_038588656   ⟹   XP_038444584
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X122,703,489 - 122,732,436 (-)NCBI
RefSeq Acc Id: XM_038588657   ⟹   XP_038444585
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X122,703,489 - 122,733,429 (-)NCBI
RefSeq Acc Id: XM_038588658   ⟹   XP_038444586
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X122,703,489 - 122,738,554 (-)NCBI
RefSeq Acc Id: XM_038588659   ⟹   XP_038444587
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X122,703,489 - 122,733,227 (-)NCBI
RefSeq Acc Id: XM_038588660   ⟹   XP_038444588
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X122,703,489 - 122,732,785 (-)NCBI
RefSeq Acc Id: XM_038653177   ⟹   XP_038509105
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X122,941,327 - 122,970,339 (-)NCBI
RefSeq Acc Id: XM_038653178   ⟹   XP_038509106
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X122,941,327 - 122,971,332 (-)NCBI
RefSeq Acc Id: XM_038653179   ⟹   XP_038509107
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X122,941,327 - 122,976,452 (-)NCBI
RefSeq Acc Id: XM_038653180   ⟹   XP_038509108
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X122,941,327 - 122,971,130 (-)NCBI
RefSeq Acc Id: XM_038653181   ⟹   XP_038509109
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X122,941,327 - 122,970,688 (-)NCBI
RefSeq Acc Id: XM_538200   ⟹   XP_538200
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X121,515,417 - 121,545,321 (-)NCBI
Dog10K_Boxer_TashaX106,844,790 - 106,874,725 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_538200   ⟸   XM_538200
- Peptide Label: isoform X2
- UniProtKB: E2R5S2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005642053   ⟸   XM_005641996
- Peptide Label: isoform X2
- UniProtKB: E2R5S2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005642052   ⟸   XM_005641995
- Peptide Label: isoform X2
- UniProtKB: E2R5S2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022271263   ⟸   XM_022415555
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSCAFP00000031361   ⟸   ENSCAFT00000003882
RefSeq Acc Id: XP_038380621   ⟸   XM_038524693
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038380620   ⟸   XM_038524692
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038380622   ⟸   XM_038524694
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038380623   ⟸   XM_038524695
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038380619   ⟸   XM_038524691
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038509107   ⟸   XM_038653179
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038509106   ⟸   XM_038653178
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038509108   ⟸   XM_038653180
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038509109   ⟸   XM_038653181
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038509105   ⟸   XM_038653177
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038307154   ⟸   XM_038451226
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038307153   ⟸   XM_038451225
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038307155   ⟸   XM_038451227
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038307156   ⟸   XM_038451228
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038307152   ⟸   XM_038451224
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038320197   ⟸   XM_038464269
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038444586   ⟸   XM_038588658
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038444585   ⟸   XM_038588657
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038444587   ⟸   XM_038588659
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038444588   ⟸   XM_038588660
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038444584   ⟸   XM_038588656
- Peptide Label: isoform X1
Protein Domains
Bap31   Bap31_Bap29_C


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000019245 Ensembl, UniProtKB/TrEMBL
Ensembl Protein ENSCAFP00000031361 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000003882 UniProtKB/TrEMBL
InterPro BAP29/BAP31 UniProtKB/TrEMBL
  BAP29/BAP31_N UniProtKB/TrEMBL
  Bap31/Bap29_C UniProtKB/TrEMBL
NCBI Gene BCAP31 ENTREZGENE
PANTHER PTHR12701 UniProtKB/TrEMBL
Pfam Bap31 UniProtKB/TrEMBL
  Bap31_Bap29_C UniProtKB/TrEMBL
UniProt E2R5S2 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:38397 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-12-19 BCAP31  B cell receptor associated protein 31    B-cell receptor associated protein 31  Symbol and/or name change 5135510 APPROVED
2017-05-16 BCAP31  B-cell receptor associated protein 31    B-cell receptor-associated protein 31  Symbol and/or name change 5135510 APPROVED