SLC25A25 (solute carrier family 25 member 25) - Rat Genome Database

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Gene: SLC25A25 (solute carrier family 25 member 25) Canis lupus familiaris
Analyze
Symbol: SLC25A25
Name: solute carrier family 25 member 25
RGD ID: 12243224
Description: ENCODES a protein that exhibits ATP:inorganic phosphate antiporter activity (ortholog); INVOLVED IN adipose tissue development (ortholog); ATP metabolic process (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); congenital disorder of glycosylation Iu (ortholog); developmental and epileptic encephalopathy (ortholog); FOUND IN membrane (inferred); mitochondrial inner membrane (inferred); mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: calcium-binding mitochondrial carrier protein SCaMC-2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1955,358,348 - 55,394,624 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl955,360,043 - 55,394,519 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha954,553,071 - 54,588,912 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0956,285,169 - 56,316,835 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1955,040,512 - 55,076,587 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0955,355,242 - 55,391,319 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0955,446,944 - 55,482,811 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
SLC25A25
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1955,358,348 - 55,394,624 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl955,360,043 - 55,394,519 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha954,553,071 - 54,588,912 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0956,285,169 - 56,316,835 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1955,040,512 - 55,076,587 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0955,355,242 - 55,391,319 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0955,446,944 - 55,482,811 (-)NCBIUU_Cfam_GSD_1.0
SLC25A25
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389128,068,232 - 128,109,245 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9128,068,201 - 128,109,245 (+)EnsemblGRCh38hg38GRCh38
GRCh379130,830,511 - 130,871,524 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369129,870,300 - 129,911,345 (+)NCBINCBI36Build 36hg18NCBI36
Build 349127,940,370 - 127,951,078NCBI
Celera9101,482,501 - 101,523,452 (+)NCBICelera
Cytogenetic Map9q34.11NCBI
HuRef9100,445,708 - 100,486,206 (+)NCBIHuRef
CHM1_19130,982,710 - 131,023,583 (+)NCBICHM1_1
T2T-CHM13v2.09140,276,208 - 140,317,210 (+)NCBIT2T-CHM13v2.0
Slc25a25
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39232,304,499 - 32,341,482 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl232,304,499 - 32,341,457 (-)EnsemblGRCm39 Ensembl
GRCm38232,414,487 - 32,451,470 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl232,414,487 - 32,451,445 (-)EnsemblGRCm38mm10GRCm38
MGSCv37232,270,007 - 32,306,990 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36232,236,489 - 32,273,431 (-)NCBIMGSCv36mm8
Celera232,120,151 - 32,157,130 (-)NCBICelera
Cytogenetic Map2BNCBI
cM Map222.09NCBI
Slc25a25
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8336,106,448 - 36,139,812 (-)NCBIGRCr8
mRatBN7.2315,708,702 - 15,742,195 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl315,708,703 - 15,742,216 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx318,777,546 - 18,787,673 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0327,362,543 - 27,372,674 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0325,613,291 - 25,623,413 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0311,442,396 - 11,476,186 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl311,442,397 - 11,452,529 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0316,791,266 - 16,825,049 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4311,539,415 - 11,549,538 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1311,435,787 - 11,445,910 (-)NCBI
Celera310,451,575 - 10,461,792 (-)NCBICelera
Cytogenetic Map3p11NCBI
Slc25a25
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955419618,979 - 656,189 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955419621,445 - 656,172 (-)NCBIChiLan1.0ChiLan1.0
SLC25A25
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21111,243,799 - 11,284,673 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1911,246,147 - 11,287,021 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0999,188,906 - 99,229,771 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19127,859,948 - 127,900,922 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9127,859,948 - 127,900,922 (+)Ensemblpanpan1.1panPan2
Slc25a25
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947195,892,611 - 195,927,737 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648715,661,079 - 15,696,406 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648715,661,133 - 15,696,267 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A25
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1268,531,752 - 268,576,994 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11268,531,752 - 268,575,195 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21302,558,673 - 302,565,658 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Sscrofa10.21302,453,222 - 302,453,476 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC25A25
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11210,017,775 - 10,059,013 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1210,017,755 - 10,035,476 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660796,165,921 - 6,208,553 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc25a25
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247607,515,764 - 7,550,810 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247607,516,910 - 7,550,897 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SLC25A25
465 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 18 6 6 6 5 1 12 3 1
Low 5 5 4 1 5 8 7 5
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005625310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005625311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014117031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022423774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038487306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038549222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038549223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038549224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038549225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038549226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038549227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038549228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038549229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038549231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038549232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038549233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038613167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038613168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038613169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038613170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038613171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038613172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038613173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038613174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038613175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038613177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038613178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038675151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_548442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_857280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_857389 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_857417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000031982   ⟹   ENSCAFP00000029780
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl955,360,043 - 55,394,519 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000061439   ⟹   ENSCAFP00000044342
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl955,360,043 - 55,394,519 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000066635   ⟹   ENSCAFP00000058100
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl955,360,043 - 55,369,407 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000084203   ⟹   ENSCAFP00000045545
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl955,360,043 - 55,376,819 (-)Ensembl
RefSeq Acc Id: XM_005625310   ⟹   XP_005625367
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1955,358,348 - 55,394,624 (-)NCBI
Dog10K_Boxer_Tasha954,553,071 - 54,588,912 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005625311   ⟹   XP_005625368
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1955,358,348 - 55,369,514 (-)NCBI
Dog10K_Boxer_Tasha954,553,071 - 54,564,021 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014117031   ⟹   XP_013972506
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1955,358,348 - 55,369,135 (-)NCBI
Dog10K_Boxer_Tasha954,553,071 - 54,563,589 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022423772   ⟹   XP_022279480
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1955,358,348 - 55,377,270 (-)NCBI
Dog10K_Boxer_Tasha954,553,071 - 54,571,729 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022423773   ⟹   XP_022279481
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1955,358,348 - 55,376,565 (-)NCBI
Dog10K_Boxer_Tasha954,553,071 - 54,570,509 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022423774   ⟹   XP_022279482
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1955,358,348 - 55,377,664 (-)NCBI
Dog10K_Boxer_Tasha954,553,071 - 54,572,167 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038487295   ⟹   XP_038343223
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1955,040,512 - 55,076,587 (-)NCBI
RefSeq Acc Id: XM_038487296   ⟹   XP_038343224
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1955,040,512 - 55,076,587 (-)NCBI
RefSeq Acc Id: XM_038487297   ⟹   XP_038343225
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1955,040,512 - 55,059,224 (-)NCBI
RefSeq Acc Id: XM_038487298   ⟹   XP_038343226
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1955,040,512 - 55,059,221 (-)NCBI
RefSeq Acc Id: XM_038487299   ⟹   XP_038343227
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1955,040,512 - 55,051,675 (-)NCBI
RefSeq Acc Id: XM_038487301   ⟹   XP_038343229
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1955,040,512 - 55,051,675 (-)NCBI
RefSeq Acc Id: XM_038487302   ⟹   XP_038343230
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1955,040,512 - 55,051,248 (-)NCBI
RefSeq Acc Id: XM_038487303   ⟹   XP_038343231
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1955,040,512 - 55,059,386 (-)NCBI
RefSeq Acc Id: XM_038487304   ⟹   XP_038343232
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1955,040,512 - 55,049,352 (-)NCBI
RefSeq Acc Id: XM_038487305   ⟹   XP_038343233
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1955,040,512 - 55,059,824 (-)NCBI
RefSeq Acc Id: XM_038487306   ⟹   XP_038343234
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1955,040,512 - 55,058,166 (-)NCBI
RefSeq Acc Id: XM_038549222   ⟹   XP_038405150
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0955,446,944 - 55,482,811 (-)NCBI
RefSeq Acc Id: XM_038549223   ⟹   XP_038405151
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0955,446,944 - 55,482,811 (-)NCBI
RefSeq Acc Id: XM_038549224   ⟹   XP_038405152
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0955,446,944 - 55,465,453 (-)NCBI
RefSeq Acc Id: XM_038549225   ⟹   XP_038405153
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0955,446,944 - 55,465,450 (-)NCBI
RefSeq Acc Id: XM_038549226   ⟹   XP_038405154
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0955,446,944 - 55,457,892 (-)NCBI
RefSeq Acc Id: XM_038549227   ⟹   XP_038405155
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0955,446,944 - 55,457,892 (-)NCBI
RefSeq Acc Id: XM_038549228   ⟹   XP_038405156
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0955,446,944 - 55,457,461 (-)NCBI
RefSeq Acc Id: XM_038549229   ⟹   XP_038405157
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0955,446,944 - 55,465,615 (-)NCBI
RefSeq Acc Id: XM_038549231   ⟹   XP_038405159
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0955,446,944 - 55,455,565 (-)NCBI
RefSeq Acc Id: XM_038549232   ⟹   XP_038405160
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0955,446,944 - 55,466,053 (-)NCBI
RefSeq Acc Id: XM_038549233   ⟹   XP_038405161
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0955,446,944 - 55,464,395 (-)NCBI
RefSeq Acc Id: XM_038613167   ⟹   XP_038469095
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0955,355,242 - 55,391,319 (-)NCBI
RefSeq Acc Id: XM_038613168   ⟹   XP_038469096
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0955,355,242 - 55,391,319 (-)NCBI
RefSeq Acc Id: XM_038613169   ⟹   XP_038469097
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0955,355,242 - 55,373,947 (-)NCBI
RefSeq Acc Id: XM_038613170   ⟹   XP_038469098
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0955,355,242 - 55,373,944 (-)NCBI
RefSeq Acc Id: XM_038613171   ⟹   XP_038469099
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0955,355,242 - 55,366,397 (-)NCBI
RefSeq Acc Id: XM_038613172   ⟹   XP_038469100
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0955,355,242 - 55,366,397 (-)NCBI
RefSeq Acc Id: XM_038613173   ⟹   XP_038469101
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0955,355,242 - 55,365,978 (-)NCBI
RefSeq Acc Id: XM_038613174   ⟹   XP_038469102
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0955,355,242 - 55,374,109 (-)NCBI
RefSeq Acc Id: XM_038613175   ⟹   XP_038469103
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0955,355,242 - 55,364,082 (-)NCBI
RefSeq Acc Id: XM_038613177   ⟹   XP_038469105
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0955,355,242 - 55,374,547 (-)NCBI
RefSeq Acc Id: XM_038613178   ⟹   XP_038469106
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0955,355,242 - 55,372,889 (-)NCBI
RefSeq Acc Id: XM_038618450   ⟹   XP_038474378
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha954,553,071 - 54,561,693 (-)NCBI
RefSeq Acc Id: XM_038675151   ⟹   XP_038531079
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0956,285,169 - 56,316,835 (-)NCBI
RefSeq Acc Id: XM_548442   ⟹   XP_548442
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1955,358,348 - 55,377,082 (-)NCBI
Dog10K_Boxer_Tasha954,553,071 - 54,571,567 (-)NCBI
Sequence:
RefSeq Acc Id: XM_857280   ⟹   XP_862373
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1955,358,348 - 55,394,622 (-)NCBI
Dog10K_Boxer_Tasha954,553,071 - 54,588,912 (-)NCBI
Sequence:
RefSeq Acc Id: XM_857389   ⟹   XP_862482
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1955,358,348 - 55,377,081 (-)NCBI
Dog10K_Boxer_Tasha954,553,071 - 54,571,564 (-)NCBI
Sequence:
RefSeq Acc Id: XM_857417   ⟹   XP_862510
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1955,358,348 - 55,369,513 (-)NCBI
Dog10K_Boxer_Tasha954,553,071 - 54,564,021 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005625367 (Get FASTA)   NCBI Sequence Viewer  
  XP_005625368 (Get FASTA)   NCBI Sequence Viewer  
  XP_013972506 (Get FASTA)   NCBI Sequence Viewer  
  XP_022279480 (Get FASTA)   NCBI Sequence Viewer  
  XP_022279481 (Get FASTA)   NCBI Sequence Viewer  
  XP_022279482 (Get FASTA)   NCBI Sequence Viewer  
  XP_038343223 (Get FASTA)   NCBI Sequence Viewer  
  XP_038343224 (Get FASTA)   NCBI Sequence Viewer  
  XP_038343225 (Get FASTA)   NCBI Sequence Viewer  
  XP_038343226 (Get FASTA)   NCBI Sequence Viewer  
  XP_038343227 (Get FASTA)   NCBI Sequence Viewer  
  XP_038343229 (Get FASTA)   NCBI Sequence Viewer  
  XP_038343230 (Get FASTA)   NCBI Sequence Viewer  
  XP_038343231 (Get FASTA)   NCBI Sequence Viewer  
  XP_038343232 (Get FASTA)   NCBI Sequence Viewer  
  XP_038343233 (Get FASTA)   NCBI Sequence Viewer  
  XP_038343234 (Get FASTA)   NCBI Sequence Viewer  
  XP_038405150 (Get FASTA)   NCBI Sequence Viewer  
  XP_038405151 (Get FASTA)   NCBI Sequence Viewer  
  XP_038405152 (Get FASTA)   NCBI Sequence Viewer  
  XP_038405153 (Get FASTA)   NCBI Sequence Viewer  
  XP_038405154 (Get FASTA)   NCBI Sequence Viewer  
  XP_038405155 (Get FASTA)   NCBI Sequence Viewer  
  XP_038405156 (Get FASTA)   NCBI Sequence Viewer  
  XP_038405157 (Get FASTA)   NCBI Sequence Viewer  
  XP_038405159 (Get FASTA)   NCBI Sequence Viewer  
  XP_038405160 (Get FASTA)   NCBI Sequence Viewer  
  XP_038405161 (Get FASTA)   NCBI Sequence Viewer  
  XP_038469095 (Get FASTA)   NCBI Sequence Viewer  
  XP_038469096 (Get FASTA)   NCBI Sequence Viewer  
  XP_038469097 (Get FASTA)   NCBI Sequence Viewer  
  XP_038469098 (Get FASTA)   NCBI Sequence Viewer  
  XP_038469099 (Get FASTA)   NCBI Sequence Viewer  
  XP_038469100 (Get FASTA)   NCBI Sequence Viewer  
  XP_038469101 (Get FASTA)   NCBI Sequence Viewer  
  XP_038469102 (Get FASTA)   NCBI Sequence Viewer  
  XP_038469103 (Get FASTA)   NCBI Sequence Viewer  
  XP_038469105 (Get FASTA)   NCBI Sequence Viewer  
  XP_038469106 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474378 (Get FASTA)   NCBI Sequence Viewer  
  XP_038531079 (Get FASTA)   NCBI Sequence Viewer  
  XP_548442 (Get FASTA)   NCBI Sequence Viewer  
  XP_862373 (Get FASTA)   NCBI Sequence Viewer  
  XP_862482 (Get FASTA)   NCBI Sequence Viewer  
  XP_862510 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000029780.4
  ENSCAFP00000044342.1
  ENSCAFP00000045545.2
  ENSCAFP00000058100.1
  ENSCAFP00000069982.1
  ENSCAFP00030020243.1
  ENSCAFP00030020327.1
  ENSCAFP00030020409.1
  ENSCAFP00030020448.1
  ENSCAFP00040025263.1
  ENSCAFP00040025284.1
  ENSCAFP00040025337.1
  ENSCAFP00040025377.1
RefSeq Acc Id: XP_862373   ⟸   XM_857280
- Peptide Label: isoform X27
- UniProtKB: A0A8C0KR98 (UniProtKB/TrEMBL),   A0A8C0STK7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005625367   ⟸   XM_005625310
- Peptide Label: isoform X26
- UniProtKB: A0A8C0N732 (UniProtKB/TrEMBL),   A0A8P0NUP3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_548442   ⟸   XM_548442
- Peptide Label: isoform X28
- UniProtKB: A0A8C0N238 (UniProtKB/TrEMBL),   A0A8P0TM81 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_862482   ⟸   XM_857389
- Peptide Label: isoform X29
- UniProtKB: A0A8P0NLD0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005625368   ⟸   XM_005625311
- Peptide Label: isoform X30
- UniProtKB: A0A8C0RIS5 (UniProtKB/TrEMBL),   A0A8P0P783 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_862510   ⟸   XM_857417
- Peptide Label: isoform X31
- UniProtKB: A0A8C0R1X1 (UniProtKB/TrEMBL),   A0A8C0SUJ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013972506   ⟸   XM_014117031
- Peptide Label: isoform X32
- Sequence:
RefSeq Acc Id: XP_022279482   ⟸   XM_022423774
- Peptide Label: isoform X33
- Sequence:
RefSeq Acc Id: XP_022279480   ⟸   XM_022423772
- Peptide Label: isoform X33
- Sequence:
RefSeq Acc Id: XP_022279481   ⟸   XM_022423773
- Peptide Label: isoform X33
- Sequence:
RefSeq Acc Id: ENSCAFP00000045545   ⟸   ENSCAFT00000084203
RefSeq Acc Id: ENSCAFP00000058100   ⟸   ENSCAFT00000066635
RefSeq Acc Id: ENSCAFP00000029780   ⟸   ENSCAFT00000031982
RefSeq Acc Id: ENSCAFP00000044342   ⟸   ENSCAFT00000061439
RefSeq Acc Id: XP_038343224   ⟸   XM_038487296
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038343223   ⟸   XM_038487295
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038343233   ⟸   XM_038487305
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038343231   ⟸   XM_038487303
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038343225   ⟸   XM_038487297
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038343226   ⟸   XM_038487298
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038343234   ⟸   XM_038487306
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038343229   ⟸   XM_038487301
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038343227   ⟸   XM_038487299
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038343230   ⟸   XM_038487302
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038343232   ⟸   XM_038487304
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038469096   ⟸   XM_038613168
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038469095   ⟸   XM_038613167
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038469105   ⟸   XM_038613177
- Peptide Label: isoform X17
RefSeq Acc Id: XP_038469102   ⟸   XM_038613174
- Peptide Label: isoform X17
RefSeq Acc Id: XP_038469097   ⟸   XM_038613169
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038469098   ⟸   XM_038613170
- Peptide Label: isoform X13
RefSeq Acc Id: XP_038469106   ⟸   XM_038613178
- Peptide Label: isoform X17
RefSeq Acc Id: XP_038469100   ⟸   XM_038613172
- Peptide Label: isoform X15
RefSeq Acc Id: XP_038469099   ⟸   XM_038613171
- Peptide Label: isoform X14
RefSeq Acc Id: XP_038469101   ⟸   XM_038613173
- Peptide Label: isoform X16
RefSeq Acc Id: XP_038469103   ⟸   XM_038613175
- Peptide Label: isoform X17
RefSeq Acc Id: XP_038531079   ⟸   XM_038675151
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038474378   ⟸   XM_038618450
- Peptide Label: isoform X33
RefSeq Acc Id: XP_038405151   ⟸   XM_038549223
- Peptide Label: isoform X19
- UniProtKB: A0A8C0KR98 (UniProtKB/TrEMBL),   A0A8C0STK7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038405150   ⟸   XM_038549222
- Peptide Label: isoform X18
- UniProtKB: A0A8C0N732 (UniProtKB/TrEMBL),   A0A8P0NUP3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038405160   ⟸   XM_038549232
- Peptide Label: isoform X25
RefSeq Acc Id: XP_038405157   ⟸   XM_038549229
- Peptide Label: isoform X25
RefSeq Acc Id: XP_038405152   ⟸   XM_038549224
- Peptide Label: isoform X20
RefSeq Acc Id: XP_038405153   ⟸   XM_038549225
- Peptide Label: isoform X21
- UniProtKB: A0A8C0R281 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038405161   ⟸   XM_038549233
- Peptide Label: isoform X25
RefSeq Acc Id: XP_038405155   ⟸   XM_038549227
- Peptide Label: isoform X23
- UniProtKB: A0A8C0R1X1 (UniProtKB/TrEMBL),   A0A8C0SUJ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038405154   ⟸   XM_038549226
- Peptide Label: isoform X22
- UniProtKB: A0A8C0RIS5 (UniProtKB/TrEMBL),   A0A8P0P783 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038405156   ⟸   XM_038549228
- Peptide Label: isoform X24
RefSeq Acc Id: XP_038405159   ⟸   XM_038549231
- Peptide Label: isoform X25
Protein Domains
EF-hand

Promoters
RGD ID:13684825
Promoter ID:EPDNEW_C2892
Type:multiple initiation site
Name:SLC25A25_1
Description:solute carrier family 25 member 25
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1955,394,617 - 55,394,677EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000020091 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030012385 UniProtKB/TrEMBL
  ENSCAFG00040015345 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000031982.5 UniProtKB/TrEMBL
  ENSCAFT00000061439.2 UniProtKB/TrEMBL
  ENSCAFT00000066635.2 UniProtKB/TrEMBL
  ENSCAFT00000084203.2 UniProtKB/TrEMBL
  ENSCAFT00000098486.1 UniProtKB/TrEMBL
  ENSCAFT00030023211.1 UniProtKB/TrEMBL
  ENSCAFT00030023312.1 UniProtKB/TrEMBL
  ENSCAFT00030023410.1 UniProtKB/TrEMBL
  ENSCAFT00030023457.1 UniProtKB/TrEMBL
  ENSCAFT00040029075.1 UniProtKB/TrEMBL
  ENSCAFT00040029100.1 UniProtKB/TrEMBL
  ENSCAFT00040029155.1 UniProtKB/TrEMBL
  ENSCAFT00040029202.1 UniProtKB/TrEMBL
Gene3D-CATH 1.50.40.10 UniProtKB/TrEMBL
  EF-hand UniProtKB/TrEMBL
InterPro EF-hand-dom_pair UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/TrEMBL
  Graves_DC UniProtKB/TrEMBL
  Mit_carrier UniProtKB/TrEMBL
  Mitochondrial_sb/sol_carrier UniProtKB/TrEMBL
  Mt_carrier_dom_sf UniProtKB/TrEMBL
KEGG Report cfa:491321 UniProtKB/TrEMBL
NCBI Gene SLC25A25 ENTREZGENE
PANTHER CALCIUM-BINDING MITOCHONDRIAL CARRIER PROTEIN SCAMC-2 UniProtKB/TrEMBL
  SOLUTE CARRIER FAMILY 25 UniProtKB/TrEMBL
Pfam EF-hand_7 UniProtKB/TrEMBL
  EF-hand_8 UniProtKB/TrEMBL
  Mito_carr UniProtKB/TrEMBL
PRINTS GRAVESDC UniProtKB/TrEMBL
  MITOCARRIER UniProtKB/TrEMBL
PROSITE EF_HAND_2 UniProtKB/TrEMBL
  SOLCAR UniProtKB/TrEMBL
SMART EFh UniProtKB/TrEMBL
Superfamily-SCOP SSF103506 UniProtKB/TrEMBL
  SSF47473 UniProtKB/TrEMBL
UniProt A0A8C0KR98 ENTREZGENE
  A0A8C0N238 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0N732 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0R1X1 ENTREZGENE
  A0A8C0R281 ENTREZGENE
  A0A8C0RIS5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0STK7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SUJ0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0NLD0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0NUP3 ENTREZGENE
  A0A8P0P783 ENTREZGENE
  A0A8P0SYU5_CANLF UniProtKB/TrEMBL
  A0A8P0TM81 ENTREZGENE
UniProt Secondary A0A8P0NUP3 UniProtKB/TrEMBL
  A0A8P0P783 UniProtKB/TrEMBL
  A0A8P0TM81 UniProtKB/TrEMBL
VGNC ID VGNC:46301 ENTREZGENE