OR52J8 (olfactory receptor family 52 subfamily J member 8) - Rat Genome Database

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Gene: OR52J8 (olfactory receptor family 52 subfamily J member 8) Canis lupus familiaris
Analyze
No known orthologs.
Symbol: OR52J8
Name: olfactory receptor family 52 subfamily J member 8
RGD ID: 12241484
Description: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: COR52J8
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12127,651,356 - 27,652,291 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2127,651,356 - 27,652,291 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2127,417,115 - 27,418,050 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02128,277,857 - 28,278,792 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2128,277,857 - 28,278,792 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12127,699,448 - 27,700,383 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02127,962,736 - 27,963,671 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02128,012,386 - 28,013,321 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:14962662   PMID:22301074  


Genomics

Variants

.
Variants in OR52J8
9 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00000070813   ⟹   ENSCAFP00000061064
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2127,651,356 - 27,652,291 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845034421   ⟹   ENSCAFP00845026955
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2128,277,857 - 28,278,792 (+)Ensembl
RefSeq Acc Id: NM_001256448   ⟹   NP_001243377
RefSeq Status: VALIDATED
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12127,651,356 - 27,652,291 (+)NCBI
Dog10K_Boxer_Tasha2127,417,115 - 27,418,050 (+)NCBI
ROS_Cfam_1.02128,277,857 - 28,278,792 (+)NCBI
UMICH_Zoey_3.12127,699,448 - 27,700,383 (+)NCBI
UNSW_CanFamBas_1.02127,962,736 - 27,963,671 (+)NCBI
UU_Cfam_GSD_1.02128,012,386 - 28,013,321 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001243377 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000061064.1
  ENSCAFP00030029532.1
  ENSCAFP00040037344.1
  ENSCAFP00845026955
  ENSCAFP00845026955.1
Reference Protein Sequences
RefSeq Acc Id: NP_001243377   ⟸   NM_001256448
- UniProtKB: A0A8C0TLA3 (UniProtKB/TrEMBL),   A0A8I3NYI1 (UniProtKB/TrEMBL),   A0A8C0NU66 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000061064   ⟸   ENSCAFT00000070813
RefSeq Acc Id: ENSCAFP00845026955   ⟸   ENSCAFT00845034421
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000049476 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030018404 UniProtKB/TrEMBL
  ENSCAFG00040023035 UniProtKB/TrEMBL
  ENSCAFG00845019524 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000070813.2 UniProtKB/TrEMBL
  ENSCAFT00030033866.1 UniProtKB/TrEMBL
  ENSCAFT00040042810.1 UniProtKB/TrEMBL
  ENSCAFT00845034421 ENTREZGENE
  ENSCAFT00845034421.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report cfa:541586 UniProtKB/TrEMBL
NCBI Gene COR52J8 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 56B1-RELATED UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
SMART 7TM_GPCR_Srsx UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8C0NU66 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TLA3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NYI1 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:96646 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-02-04 OR52J8  olfactory receptor family 52 subfamily J member 8  COR52J8  olfactory receptor family 52 subfamily J member 8  Symbol and/or name change 5135510 APPROVED