ST6GAL1 (ST6 beta-galactoside alpha-2,6-sialyltransferase 1) - Rat Genome Database

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Gene: ST6GAL1 (ST6 beta-galactoside alpha-2,6-sialyltransferase 1) Canis lupus familiaris
Analyze
Symbol: ST6GAL1
Name: ST6 beta-galactoside alpha-2,6-sialyltransferase 1
RGD ID: 12240066
Description: ENCODES a protein that exhibits sialyltransferase activity (ortholog); INVOLVED IN negative regulation of chemotaxis (ortholog); negative regulation of macrophage apoptotic process (ortholog); positive regulation of mononuclear cell proliferation (ortholog); ASSOCIATED WITH 3MC syndrome 1 (ortholog); alcohol use disorder (ortholog); allergic contact dermatitis (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi medial cisterna (ortholog); Golgi trans cisterna (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: beta-galactoside alpha-2,6-sialyltransferase 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13419,497,577 - 19,589,125 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3419,497,922 - 19,586,427 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3423,553,294 - 23,675,456 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03419,379,150 - 19,501,792 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3419,380,090 - 19,501,787 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13419,410,367 - 19,531,590 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03419,410,079 - 19,531,772 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03419,643,504 - 19,764,764 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
ST6GAL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13419,497,577 - 19,589,125 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3419,497,922 - 19,586,427 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3423,553,294 - 23,675,456 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03419,379,150 - 19,501,792 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3419,380,090 - 19,501,787 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13419,410,367 - 19,531,590 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03419,410,079 - 19,531,772 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03419,643,504 - 19,764,764 (+)NCBIUU_Cfam_GSD_1.0
ST6GAL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383186,930,526 - 187,078,553 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl3186,930,325 - 187,078,553 (+)EnsemblGRCh38hg38GRCh38
GRCh373186,648,315 - 186,796,341 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363188,131,210 - 188,279,035 (+)NCBINCBI36Build 36hg18NCBI36
Celera3185,080,508 - 185,228,493 (+)NCBICelera
Cytogenetic Map3q27.3NCBI
HuRef3184,053,004 - 184,200,845 (+)NCBIHuRef
CHM1_13186,611,743 - 186,760,043 (+)NCBICHM1_1
T2T-CHM13v2.03189,748,335 - 189,896,308 (+)NCBIT2T-CHM13v2.0
St6gal1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391623,043,478 - 23,179,100 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1623,043,490 - 23,179,100 (+)EnsemblGRCm39 Ensembl
GRCm381623,224,729 - 23,360,350 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1623,224,740 - 23,360,350 (+)EnsemblGRCm38mm10GRCm38
MGSCv371623,224,835 - 23,360,421 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361623,140,096 - 23,275,682 (+)NCBIMGSCv36mm8
Celera1623,783,051 - 23,918,950 (+)NCBICelera
Cytogenetic Map16B1NCBI
cM Map1614.03NCBI
St6gal1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21177,526,837 - 77,653,474 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1177,526,837 - 77,653,310 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1186,277,327 - 86,319,671 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01178,916,068 - 78,958,433 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01177,991,611 - 78,033,954 (-)NCBIRnor_WKY
Rnor_6.01180,927,601 - 80,981,424 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1180,927,601 - 80,981,422 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01179,754,201 - 79,808,024 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41179,723,269 - 79,765,645 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11179,780,860 - 79,789,781 (-)NCBI
Celera1176,402,694 - 76,445,042 (-)NCBICelera
Cytogenetic Map11q23NCBI
St6gal1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542020,709,301 - 20,801,167 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542020,708,890 - 20,801,167 (-)NCBIChiLan1.0ChiLan1.0
ST6GAL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.13192,421,036 - 192,569,970 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3192,488,087 - 192,569,970 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v03183,955,462 - 184,104,537 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
St6gal1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602116,874,836 - 117,015,302 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365782,966,694 - 3,003,970 (-)EnsemblSpeTri2.0
SpeTri2.0NW_0049365782,966,690 - 3,107,237 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ST6GAL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13124,791,751 - 124,837,841 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113124,699,622 - 124,837,847 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ST6GAL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11581,205,121 - 81,346,089 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1581,239,631 - 81,349,173 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604154,697,038 - 54,836,111 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
St6gal1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473069,745,865 - 69,845,367 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473069,746,207 - 69,871,020 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ST6GAL1
1071 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 4 18 6 6 6 6 8 10 4
Low 1 5 4 6 4 7 2
Below cutoff 1

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005639812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005639813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022414319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038445832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038462727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038583655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038648071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000021728   ⟹   ENSCAFP00000020181
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3419,497,922 - 19,586,427 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000084017   ⟹   ENSCAFP00000047438
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3419,497,922 - 19,586,427 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845038860   ⟹   ENSCAFP00845030436
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3419,380,090 - 19,501,787 (+)Ensembl
RefSeq Acc Id: XM_005639812   ⟹   XP_005639869
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13419,497,577 - 19,589,125 (+)NCBI
Dog10K_Boxer_Tasha3423,582,968 - 23,675,456 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038445827   ⟹   XP_038301755
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03419,379,997 - 19,501,792 (+)NCBI
RefSeq Acc Id: XM_038445828   ⟹   XP_038301756
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03419,408,798 - 19,501,792 (+)NCBI
RefSeq Acc Id: XM_038445829   ⟹   XP_038301757
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03419,379,150 - 19,501,792 (+)NCBI
RefSeq Acc Id: XM_038445830   ⟹   XP_038301758
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03419,379,997 - 19,501,792 (+)NCBI
RefSeq Acc Id: XM_038445831   ⟹   XP_038301759
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03419,435,593 - 19,501,792 (+)NCBI
RefSeq Acc Id: XM_038445832   ⟹   XP_038301760
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03419,379,997 - 19,501,792 (+)NCBI
RefSeq Acc Id: XM_038462723   ⟹   XP_038318651
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3423,554,138 - 23,675,456 (+)NCBI
RefSeq Acc Id: XM_038462724   ⟹   XP_038318652
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3423,553,294 - 23,675,456 (+)NCBI
RefSeq Acc Id: XM_038462725   ⟹   XP_038318653
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3423,554,138 - 23,675,456 (+)NCBI
RefSeq Acc Id: XM_038462726   ⟹   XP_038318654
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3423,609,750 - 23,675,456 (+)NCBI
RefSeq Acc Id: XM_038462727   ⟹   XP_038318655
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3423,554,138 - 23,675,456 (+)NCBI
RefSeq Acc Id: XM_038520024   ⟹   XP_038375952
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13419,411,208 - 19,531,590 (+)NCBI
RefSeq Acc Id: XM_038520025   ⟹   XP_038375953
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13419,439,999 - 19,531,590 (+)NCBI
RefSeq Acc Id: XM_038520026   ⟹   XP_038375954
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13419,410,367 - 19,531,590 (+)NCBI
RefSeq Acc Id: XM_038520027   ⟹   XP_038375955
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13419,411,208 - 19,531,590 (+)NCBI
RefSeq Acc Id: XM_038520028   ⟹   XP_038375956
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13419,466,795 - 19,531,590 (+)NCBI
RefSeq Acc Id: XM_038520029   ⟹   XP_038375957
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13419,411,208 - 19,531,590 (+)NCBI
RefSeq Acc Id: XM_038583649   ⟹   XP_038439577
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03419,644,345 - 19,764,764 (+)NCBI
RefSeq Acc Id: XM_038583651   ⟹   XP_038439579
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03419,673,156 - 19,764,764 (+)NCBI
RefSeq Acc Id: XM_038583652   ⟹   XP_038439580
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03419,643,504 - 19,764,764 (+)NCBI
RefSeq Acc Id: XM_038583653   ⟹   XP_038439581
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03419,644,345 - 19,764,764 (+)NCBI
RefSeq Acc Id: XM_038583654   ⟹   XP_038439582
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03419,699,961 - 19,764,764 (+)NCBI
RefSeq Acc Id: XM_038583655   ⟹   XP_038439583
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03419,644,345 - 19,764,764 (+)NCBI
RefSeq Acc Id: XM_038648066   ⟹   XP_038503994
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03419,410,923 - 19,531,772 (+)NCBI
RefSeq Acc Id: XM_038648067   ⟹   XP_038503995
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03419,439,741 - 19,531,772 (+)NCBI
RefSeq Acc Id: XM_038648068   ⟹   XP_038503996
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03419,410,079 - 19,531,772 (+)NCBI
RefSeq Acc Id: XM_038648069   ⟹   XP_038503997
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03419,410,923 - 19,531,772 (+)NCBI
RefSeq Acc Id: XM_038648070   ⟹   XP_038503998
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03419,466,534 - 19,531,772 (+)NCBI
RefSeq Acc Id: XM_038648071   ⟹   XP_038503999
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03419,410,923 - 19,531,772 (+)NCBI
Protein Sequences
Protein RefSeqs XP_005639869 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301755 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301756 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301757 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301758 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301759 (Get FASTA)   NCBI Sequence Viewer  
  XP_038301760 (Get FASTA)   NCBI Sequence Viewer  
  XP_038318651 (Get FASTA)   NCBI Sequence Viewer  
  XP_038318652 (Get FASTA)   NCBI Sequence Viewer  
  XP_038318653 (Get FASTA)   NCBI Sequence Viewer  
  XP_038318654 (Get FASTA)   NCBI Sequence Viewer  
  XP_038318655 (Get FASTA)   NCBI Sequence Viewer  
  XP_038375952 (Get FASTA)   NCBI Sequence Viewer  
  XP_038375953 (Get FASTA)   NCBI Sequence Viewer  
  XP_038375954 (Get FASTA)   NCBI Sequence Viewer  
  XP_038375955 (Get FASTA)   NCBI Sequence Viewer  
  XP_038375956 (Get FASTA)   NCBI Sequence Viewer  
  XP_038375957 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439577 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439579 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439580 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439581 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439582 (Get FASTA)   NCBI Sequence Viewer  
  XP_038439583 (Get FASTA)   NCBI Sequence Viewer  
  XP_038503994 (Get FASTA)   NCBI Sequence Viewer  
  XP_038503995 (Get FASTA)   NCBI Sequence Viewer  
  XP_038503996 (Get FASTA)   NCBI Sequence Viewer  
  XP_038503997 (Get FASTA)   NCBI Sequence Viewer  
  XP_038503998 (Get FASTA)   NCBI Sequence Viewer  
  XP_038503999 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005639869   ⟸   XM_005639812
- Peptide Label: isoform X1
- UniProtKB: E2R2H3 (UniProtKB/TrEMBL),   A0A8C0T0L0 (UniProtKB/TrEMBL),   A0A8C0K0E3 (UniProtKB/TrEMBL),   A0A8I3S5C7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000047438   ⟸   ENSCAFT00000084017
RefSeq Acc Id: ENSCAFP00000020181   ⟸   ENSCAFT00000021728
RefSeq Acc Id: XP_038375954   ⟸   XM_038520026
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038375955   ⟸   XM_038520027
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038375952   ⟸   XM_038520024
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038375957   ⟸   XM_038520029
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038375953   ⟸   XM_038520025
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038375956   ⟸   XM_038520028
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038503996   ⟸   XM_038648068
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038503997   ⟸   XM_038648069
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038503994   ⟸   XM_038648066
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038503999   ⟸   XM_038648071
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038503995   ⟸   XM_038648067
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038503998   ⟸   XM_038648070
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038301757   ⟸   XM_038445829
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T0L0 (UniProtKB/TrEMBL),   A0A8C0K0E3 (UniProtKB/TrEMBL),   A0A8I3S5C7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038301758   ⟸   XM_038445830
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T0L0 (UniProtKB/TrEMBL),   A0A8C0K0E3 (UniProtKB/TrEMBL),   A0A8I3S5C7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038301755   ⟸   XM_038445827
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T0L0 (UniProtKB/TrEMBL),   A0A8C0K0E3 (UniProtKB/TrEMBL),   A0A8I3S5C7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038301760   ⟸   XM_038445832
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038301756   ⟸   XM_038445828
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T0L0 (UniProtKB/TrEMBL),   A0A8C0K0E3 (UniProtKB/TrEMBL),   A0A8I3S5C7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038301759   ⟸   XM_038445831
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T0L0 (UniProtKB/TrEMBL),   A0A8C0K0E3 (UniProtKB/TrEMBL),   A0A8I3S5C7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038318652   ⟸   XM_038462724
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T0L0 (UniProtKB/TrEMBL),   A0A8C0K0E3 (UniProtKB/TrEMBL),   A0A8I3S5C7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038318653   ⟸   XM_038462725
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T0L0 (UniProtKB/TrEMBL),   A0A8C0K0E3 (UniProtKB/TrEMBL),   A0A8I3S5C7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038318651   ⟸   XM_038462723
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T0L0 (UniProtKB/TrEMBL),   A0A8C0K0E3 (UniProtKB/TrEMBL),   A0A8I3S5C7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038318655   ⟸   XM_038462727
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038318654   ⟸   XM_038462726
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T0L0 (UniProtKB/TrEMBL),   A0A8C0K0E3 (UniProtKB/TrEMBL),   A0A8I3S5C7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038439580   ⟸   XM_038583652
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038439581   ⟸   XM_038583653
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038439577   ⟸   XM_038583649
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038439583   ⟸   XM_038583655
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038439579   ⟸   XM_038583651
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038439582   ⟸   XM_038583654
- Peptide Label: isoform X1
RefSeq Acc Id: ENSCAFP00845030436   ⟸   ENSCAFT00845038860

Promoters
RGD ID:13688915
Promoter ID:EPDNEW_C6983
Type:multiple initiation site
Name:ST6GAL1_1
Description:ST6 beta-galactoside alpha-2,6-sialyltransferase 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13419,497,914 - 19,497,974EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000013698 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030019839 UniProtKB/TrEMBL
  ENSCAFG00040017828 UniProtKB/TrEMBL
  ENSCAFG00845022028 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCAFP00000020181.2 UniProtKB/TrEMBL
  ENSCAFP00030031832.1 UniProtKB/TrEMBL
  ENSCAFP00040028626 UniProtKB/TrEMBL
  ENSCAFP00040028649 UniProtKB/TrEMBL
  ENSCAFP00845030436 ENTREZGENE
  ENSCAFP00845030436.1 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000021728.4 UniProtKB/TrEMBL
  ENSCAFT00030036489.1 UniProtKB/TrEMBL
  ENSCAFT00040032903 UniProtKB/TrEMBL
  ENSCAFT00040032926 UniProtKB/TrEMBL
  ENSCAFT00845038860 ENTREZGENE
  ENSCAFT00845038860.1 UniProtKB/TrEMBL
Gene3D-CATH 3.90.1480.20 UniProtKB/TrEMBL
InterPro Glyco_trans_29 UniProtKB/TrEMBL
  GT29-like_sf UniProtKB/TrEMBL
  Sialyl_trans UniProtKB/TrEMBL
NCBI Gene ST6GAL1 ENTREZGENE
Pfam Glyco_transf_29 UniProtKB/TrEMBL
PIRSF Sialyl_trans UniProtKB/TrEMBL
UniProt A0A8C0K0E3 ENTREZGENE
  A0A8C0T0L0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0T2A7_CANLF UniProtKB/TrEMBL
  A0A8I3S5C7 ENTREZGENE, UniProtKB/TrEMBL
  E2R2H3 ENTREZGENE
VGNC ID VGNC:46856 ENTREZGENE