AICDA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 27 | 37,064,107 - 37,073,791 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 27 | 37,064,080 - 37,073,789 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 27 | 9,542,544 - 9,552,236 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 27 | 37,413,568 - 37,423,269 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 27 | 37,413,475 - 37,423,284 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 27 | 37,294,310 - 37,303,981 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 27 | 37,329,570 - 37,339,245 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 27 | 9,029,099 - 9,038,784 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
AICDA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 12 | 8,602,170 - 8,612,859 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 8,602,155 - 8,613,242 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 8,754,766 - 8,765,455 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 8,646,029 - 8,656,706 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 8,646,028 - 8,656,706 | NCBI | | | | | Celera | 12 | 10,292,343 - 10,303,027 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | p13.31 | NCBI | | | | | HuRef | 12 | 8,537,559 - 8,548,246 (-) | NCBI | | HuRef | | | CHM1_1 | 12 | 8,723,739 - 8,734,421 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 8,585,624 - 8,596,319 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Aicda (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 6 | 122,530,768 - 122,541,139 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 122,530,760 - 122,541,139 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 122,553,809 - 122,564,180 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 122,553,801 - 122,564,180 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 122,503,827 - 122,514,198 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 122,519,428 - 122,529,798 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 124,348,050 - 124,358,431 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | F1 | NCBI | | | | | cM Map | 6 | 57.65 | NCBI | | | | |
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Aicda (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 4 | 157,446,120 - 157,455,958 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 155,774,132 - 155,783,972 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 155,774,132 - 155,783,972 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 162,037,288 - 162,047,024 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 157,820,509 - 157,830,246 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 156,467,264 - 156,476,977 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 155,359,909 - 155,371,104 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 155,359,921 - 155,369,671 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 222,384,433 - 222,395,569 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 159,006,328 - 159,017,501 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 4 | 159,257,307 - 159,260,429 (+) | NCBI | | | | | Celera | 4 | 144,595,276 - 144,605,030 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q42 | NCBI | | | | |
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AICDA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 10 | 14,130,168 - 14,140,777 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 14,126,928 - 14,137,537 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 8,688,392 - 8,699,008 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 8,903,288 - 8,913,895 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 8,904,273 - 8,913,917 (-) | Ensembl | panpan1.1 | | panPan2 | |
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Aicda (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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AICDA (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 5 | 62,777,352 - 62,787,369 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 62,777,236 - 62,787,342 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 65,607,510 - 65,617,612 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
AICDA (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 11 | 8,426,920 - 8,438,331 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 8,428,922 - 8,431,641 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666089 | 515,359 - 525,346 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Aicda (Heterocephalus glaber - naked mole-rat) |
|