CRACR2B (calcium release activated channel regulator 2B)

Gene: CRACR2B (calcium release activated channel regulator 2B) Canis lupus familiaris

Analyze

Symbol:

CRACR2B

Name:

calcium release activated channel regulator 2B

RGD ID:

12235120

Description:

ENCODES a protein that exhibits calcium ion binding (inferred); INVOLVED IN regulation of store-operated calcium entry (ortholog); ASSOCIATED WITH delta beta-thalassemia (ortholog); developmental and epileptic encephalopathy (ortholog); early infantile epileptic encephalopathy (ortholog); FOUND IN cytoplasm (inferred); trans-Golgi network membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

EF-hand calcium binding domain 4A; EF-hand calcium-binding domain-containing protein 4A; EFCAB4A

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	45,188,527 - 45,194,077 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	45,190,250 - 45,194,038 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	43,855,476 - 43,861,081 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	45,853,437 - 45,859,041 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	45,855,553 - 45,859,002 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	45,319,036 - 45,323,792 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	44,883,025 - 44,888,623 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	45,621,151 - 45,626,754 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

delta beta-thalassemia (ISO)

developmental and epileptic encephalopathy (ISO)

early infantile epileptic encephalopathy (ISO)

genetic disease (ISO)

immunodeficiency 39 (ISO)

neuronal ceroid lipofuscinosis (ISO)

Segawa Syndrome, Autosomal Recessive (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

regulation of store-operated calcium entry (IEA,ISO)

store-operated calcium entry (IEA)

Cellular Component

cytoplasm (IEA)

trans-Golgi network membrane (IEA)

Molecular Function

calcium ion binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

CRACR2B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	45,188,527 - 45,194,077 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	45,190,250 - 45,194,038 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	43,855,476 - 43,861,081 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	45,853,437 - 45,859,041 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	45,855,553 - 45,859,002 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	45,319,036 - 45,323,792 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	44,883,025 - 44,888,623 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	45,621,151 - 45,626,754 (+)	NCBI		UU_Cfam_GSD_1.0

CRACR2B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	826,157 - 831,991 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	826,144 - 831,991 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	827,919 - 831,991 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	817,585 - 821,991 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	894,861 - 898,627 (+)	NCBI		Celera
Cytogenetic Map	11	p15.5	NCBI
HuRef	11	642,852 - 647,258 (+)	NCBI		HuRef
CHM1_1	11	826,546 - 830,952 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	877,475 - 883,426 (+)	NCBI		T2T-CHM13v2.0

Cracr2b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	141,041,007 - 141,046,526 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	141,041,007 - 141,046,526 (+)	Ensembl		GRCm39 Ensembl
GRCm38	7	141,460,875 - 141,466,613 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	141,461,094 - 141,466,613 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	148,646,993 - 148,652,501 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	141,312,463 - 141,317,933 (+)	NCBI		MGSCv36	mm8
Celera	7	141,254,886 - 141,260,393 (+)	NCBI		Celera
Cytogenetic Map	7	F5	NCBI
cM Map	7	86.82	NCBI

Cracr2b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	205,987,957 - 205,993,515 (+)	NCBI		GRCr8
mRatBN7.2	1	196,558,407 - 196,563,961 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	196,558,588 - 196,563,771 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	204,903,937 - 204,909,308 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	212,032,459 - 212,037,821 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	204,706,597 - 204,711,971 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	214,439,810 - 214,445,876 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	214,005,791 - 214,008,973 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0 Ensembl	1	214,440,503 - 214,445,874 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	220,920,617 - 220,926,199 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	201,647,804 - 201,653,175 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	194,192,084 - 194,197,455 (+)	NCBI		Celera
Cytogenetic Map	1	q41	NCBI

Cracr2b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955476	11,299,614 - 11,303,657 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955476	11,299,353 - 11,304,105 (-)	NCBI	ChiLan1.0	ChiLan1.0

CRACR2B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	3,226,151 - 3,230,958 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	2,436,096 - 2,440,903 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	845,996 - 850,814 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	888,857 - 894,053 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	889,575 - 894,053 (+)	Ensembl	panpan1.1		panPan2

Cracr2b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	586,435 - 592,273 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936888	588,974 - 592,027 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936888	586,126 - 592,275 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CRACR2B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	518,544 - 524,081 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	518,102 - 524,085 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	150,256 - 155,848 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LOC103234400
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	633,694 - 638,403 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	634,990 - 637,702 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	97,722,993 - 97,728,262 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Variants

Variants in CRACR2B
71 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	4		5				2				10
Low	1	5	17	6	6	6	4	6	12			6
Below cutoff										8

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014121113	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014121114	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022405506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038424593	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038424594	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038424595	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038424596	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038454114	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038454115	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038500864	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038563521	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038563522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038563523	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038563524	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038627642	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038627643	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038627644	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038627645	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_849078	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000213	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000015167 ⟹ ENSCAFP00000014036

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	45,190,250 - 45,194,038 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000087302 ⟹ ENSCAFP00000061143

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	45,190,250 - 45,194,038 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845011842 ⟹ ENSCAFP00845009239

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	18	45,855,553 - 45,859,002 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845011861 ⟹ ENSCAFP00845009253

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	18	45,855,553 - 45,859,002 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845011882 ⟹ ENSCAFP00845009272

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	18	45,855,553 - 45,858,783 (+)	Ensembl

RefSeq Acc Id:

XM_014121114 ⟹ XP_013976589

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	18	45,190,256 - 45,194,077 (+)	NCBI
Dog10K_Boxer_Tasha	18	43,855,476 - 43,861,081 (+)	NCBI

Sequence:

show sequence

CCAGCAGGTGCCTTCTTCTTCTCCTGCTGCCCCCTCCCCAGGTGGCCCTCCCCAGCTCCTGTCC
TGCACTGGCTTCCCCTGAGCTGCAGCCTCTAGCTCCCTGGGCAGCCCCCACAGGCTTGGAGCCT
GCATCACTCCCAGCCACGACACCCCTTCCTACAGCAGTACCCCCAAGGGAGCATCCACCCCCAG
CTCTGCTCCTCTCTGGACCTCTGCCATGCCATGTCCCACCTTCCCACCTGGTAGGAGGAGGCCC
TTCTCTCTTTACTCCCCGCAGGCTGCCACCCAGCCCAGTCCTCTTCCAGGGCCACTCCACTTTC
CCTCTTTCTCCCACTCATGTCTCTTGAGCTCTGCTCAGGCCCCGACTCTGCCTTGACTTCACAG
CACATGATGGCAGGGAACCCCCCTCCCCTGGCCAGGCCCAGGAAGCCGGGTCCTGGGGAGGCCC
AGGAGGAGGAGGAGGAGGTGGAGGAGGCGGGCTCTGTGAGGCCAAGGGCAGAGATGCTGCAGCA
GGCCCAGGAACTGTTTCTGCTGTGTGACAAGGACGCCAAGGGCTTCATCACTCGGCATGACCTG
CAGAGCGACCTGCCCCTCACGCCGGAACAGCTAGAGGCTGTGTTTGAAAGCCTGGATCAGGCCC
ACATGGGCTTCCTCACCGCTTGGGAGTTCTGCCTTGGTCTTGGGAAGTTTGTGGGGGTGGAATC
AGCCCAGGGCGCACTGCCCTCCCAGGCTCCAGAGGAAACCTTTGAGTCGGGCTGGTCAGATGTG
CATGGCCCTGGGGGCTCCCTGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGAGTCGGCCAGGCGC
TGGAGCAGCTGGGGGTGGCCCCTGTCCTGGGCGAACAGCGAGCGGTGCGGACGCTCTGGACCCG
GCTGCAGCGCGAGCGACCGGAGCTGCTGGGCTCCTTCGAGGATGTTCTGATGCGCGCGTCGGCC
TGCCTGGAGGAGGCGGCCCGAGAGCGGGACAGCCTGGAGCAGGCGCTGCGGCGGCGGGAGAGCG
AGCACGAGAGGGAGGTGCGGTGTCTGTACGAGGAGATGGAGCAGCAACTTCGGGAGCAGCGCCA
GCGCCTGCGGACTCAGGACCTCCCCCGGGAGGAGCGCAGAGGCCTCCTGGAGCTGGAGCTGCAG
AACCGCGACCAGGAGCTGGAGCGTGCGGGCCTGCGACAGCGGGAGCTGGAACAGCAGCTGCAGG
CCCGGGCCAGCGAGCAGCTGGAGGCGCAGGCGCAGAACGCCCAGCTGTGGCTAGCCCACGAGGC
TCTGAGAACTCAGTTGGAGGGAGCGCAGGAGCAGCTCCGCAGACTGGAGGGCGACCTGCAGGGC
CGCCAGGAGCAAACCCTACGAGAGGTGGTCGCAGTCTCAAGGAACATGCAGAAAGAGAAGCTCA
GCCTCCTGCGACAGCTGGAGCTCCTCAGGGAGCTGAACACGAGGCTGCGAGACCAGAGGGATGC
CTGTGAGGCCAAGCGGCTGGGCAGTGGCCGAAGGAAAGCCCTGGCAGTGGCGCGCCCGCCAGGG
CCCACCTGCTGCTGTTGCTGCTGCTGCAGCTGGGCTCGCCCTCCAAGACGTGGCTCTGGCCATC
TTCCCAGTGCCCGCTGACCATCCCTGAGTGACTCACTGGGCGTTACTTGGAGAAGCTGCCCCTT
GAAGGTGGTGCATCGTGGCTAGGGGCTGCCCATCCAGGATGTGGGCTCTATTCCGTGGACTGCC
TGGCCTGCCTGCATGTAGACATGAAGGAACTGAGGAGCGGCCCGTTTCATGTTCCTCCCTGCTG
GTCCCCATCCTGTCCCCATTCCATCAAACCGATCTCTGACCAGCAGAAAAACTCCTTCCTCCCA
ATAAAGCCCATTGACTGCA

hide sequence

RefSeq Acc Id:

XM_038424593 ⟹ XP_038280521

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	45,853,437 - 45,859,041 (+)	NCBI

RefSeq Acc Id:

XM_038424594 ⟹ XP_038280522

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	45,854,235 - 45,859,041 (+)	NCBI

RefSeq Acc Id:

XM_038424595 ⟹ XP_038280523

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	45,854,288 - 45,859,041 (+)	NCBI

RefSeq Acc Id:

XM_038424596 ⟹ XP_038280524

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	45,853,437 - 45,859,041 (+)	NCBI

RefSeq Acc Id:

XM_038454114 ⟹ XP_038310042

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	18	43,856,274 - 43,861,081 (+)	NCBI

RefSeq Acc Id:

XM_038454115 ⟹ XP_038310043

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	18	43,856,327 - 43,861,081 (+)	NCBI

RefSeq Acc Id:

XM_038500864 ⟹ XP_038356792

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	18	45,319,036 - 45,323,792 (+)	NCBI

RefSeq Acc Id:

XM_038563521 ⟹ XP_038419449

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	45,621,151 - 45,626,754 (+)	NCBI

RefSeq Acc Id:

XM_038563522 ⟹ XP_038419450

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	45,621,949 - 45,626,754 (+)	NCBI

RefSeq Acc Id:

XM_038563523 ⟹ XP_038419451

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	45,622,002 - 45,626,754 (+)	NCBI

RefSeq Acc Id:

XM_038563524 ⟹ XP_038419452

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	45,621,151 - 45,626,754 (+)	NCBI

RefSeq Acc Id:

XM_038627642 ⟹ XP_038483570

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	44,883,025 - 44,888,623 (+)	NCBI

RefSeq Acc Id:

XM_038627643 ⟹ XP_038483571

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	44,883,823 - 44,888,623 (+)	NCBI

RefSeq Acc Id:

XM_038627644 ⟹ XP_038483572

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	44,883,876 - 44,888,623 (+)	NCBI

RefSeq Acc Id:

XM_038627645 ⟹ XP_038483573

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	44,883,025 - 44,888,623 (+)	NCBI

RefSeq Acc Id:

XM_849078 ⟹ XP_854171

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	18	45,188,527 - 45,194,077 (+)	NCBI
Dog10K_Boxer_Tasha	18	43,855,476 - 43,861,081 (+)	NCBI

Sequence:

show sequence

GCCCCCTCTCCCTCTCAAGGTCCTGTCCTATAGGCCCAACCTGTTCTAGTTCAGCAGGATCCCA
GGCCCCCGGAGAAGCAGAGGCTTCTGGACCCCCACCACCCTCCAGCACATGATGGCAGGGAACC
CCCCTCCCCTGGCCAGGCCCAGGAAGCCGGGTCCTGGGGAGGCCCAGGAGGAGGAGGAGGAGGT
GGAGGAGGCGGGCTCTGTGAGGCCAAGGGCAGAGATGCTGCAGCAGGCCCAGGAACTGTTTCTG
CTGTGTGACAAGGACGCCAAGGGCTTCATCACTCGGCATGACCTGCAGGGCCTGCAGAGCGACC
TGCCCCTCACGCCGGAACAGCTAGAGGCTGTGTTTGAAAGCCTGGATCAGGCCCACATGGGCTT
CCTCACCGCTTGGGAGTTCTGCCTTGGTCTTGGGAAGTTTGTGGGGGTGGAATCAGCCCAGGGC
GCACTGCCCTCCCAGGCTCCAGAGGAAACCTTTGAGTCGGGCTGGTCAGATGTGCATGGCCCTG
GGGGCTCCCTGGAGGAGGAGGAGGAGGAGGAGGAGGAGAGAGTCGGCCAGGCGCTGGAGCAGCT
GGGGGTGGCCCCTGTCCTGGGCGAACAGCGAGCGGTGCGGACGCTCTGGACCCGGCTGCAGCGC
GAGCGACCGGAGCTGCTGGGCTCCTTCGAGGATGTTCTGATGCGCGCGTCGGCCTGCCTGGAGG
AGGCGGCCCGAGAGCGGGACAGCCTGGAGCAGGCGCTGCGGCGGCGGGAGAGCGAGCACGAGAG
GGAGGTGCGGTGTCTGTACGAGGAGATGGAGCAGCAACTTCGGGAGCAGCGCCAGCGCCTGCGG
ACTCAGGACCTCCCCCGGGAGGAGCGCAGAGGCCTCCTGGAGCTGGAGCTGCAGAACCGCGACC
AGGAGCTGGAGCGTGCGGGCCTGCGACAGCGGGAGCTGGAACAGCAGCTGCAGGCCCGGGCCAG
CGAGCAGCTGGAGGCGCAGGCGCAGAACGCCCAGCTGTGGCTAGCCCACGAGGCTCTGAGAACT
CAGTTGGAGGGAGCGCAGGAGCAGCTCCGCAGACTGGAGGGCGACCTGCAGGGCCGCCAGGAGC
AAACCCTACGAGAGGTGGTCGCAGTCTCAAGGAACATGCAGAAAGAGAAGCTCAGCCTCCTGCG
ACAGCTGGAGCTCCTCAGGGAGCTGAACACGAGGCTGCGAGACCAGAGGGATGCCTGTGAGGCC
AAGCGGCTGGGCAGTGGCCGAAGGAAAGCCCTGGCAGTGGCGCGCCCGCCAGGGCCCACCTGCT
GCTGTTGCTGCTGCTGCAGCTGGGCTCGCCCTCCAAGACGTGGCTCTGGCCATCTTCCCAGTGC
CCGCTGACCATCCCTGAGTGACTCACTGGGCGTTACTTGGAGAAGCTGCCCCTTGAAGGTGGTG
CATCGTGGCTAGGGGCTGCCCATCCAGGATGTGGGCTCTATTCCGTGGACTGCCTGGCCTGCCT
GCATGTAGACATGAAGGAACTGAGGAGCGGCCCGTTTCATGTTCCTCCCTGCTGGTCCCCATCC
TGTCCCCATTCCATCAAACCGATCTCTGACCAGCAGAAAAACTCCTTCCTCCCAATAAAGCCCA
TTGACTGCA

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Protein Sequences


Protein RefSeqs	XP_013976589	(Get FASTA)	NCBI Sequence Viewer
	XP_038280521	(Get FASTA)	NCBI Sequence Viewer
	XP_038280522	(Get FASTA)	NCBI Sequence Viewer
	XP_038280523	(Get FASTA)	NCBI Sequence Viewer
	XP_038280524	(Get FASTA)	NCBI Sequence Viewer
	XP_038310042	(Get FASTA)	NCBI Sequence Viewer
	XP_038310043	(Get FASTA)	NCBI Sequence Viewer
	XP_038356792	(Get FASTA)	NCBI Sequence Viewer
	XP_038419449	(Get FASTA)	NCBI Sequence Viewer
	XP_038419450	(Get FASTA)	NCBI Sequence Viewer
	XP_038419451	(Get FASTA)	NCBI Sequence Viewer
	XP_038419452	(Get FASTA)	NCBI Sequence Viewer
	XP_038483570	(Get FASTA)	NCBI Sequence Viewer
	XP_038483571	(Get FASTA)	NCBI Sequence Viewer
	XP_038483572	(Get FASTA)	NCBI Sequence Viewer
	XP_038483573	(Get FASTA)	NCBI Sequence Viewer
	XP_854171	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000014036.6
	ENSCAFP00000061143.2
	ENSCAFP00845009239
	ENSCAFP00845009239.1
	ENSCAFP00845009253.1
	ENSCAFP00845009272.1

RefSeq Acc Id:	XP_854171 ⟸ XM_849078
- Peptide Label:	isoform X1
- UniProtKB:	A0A8P0NBV0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMAGNPPPLARPRKPGPGEAQEEEEEVEEAGSVRPRAEMLQQAQELFLLCDKDAKGFITRHDLQ GLQSDLPLTPEQLEAVFESLDQAHMGFLTAWEFCLGLGKFVGVESAQGALPSQAPEETFESGWS DVHGPGGSLEEEEEEEEERVGQALEQLGVAPVLGEQRAVRTLWTRLQRERPELLGSFEDVLMRA SACLEEAARERDSLEQALRRRESEHEREVRCLYEEMEQQLREQRQRLRTQDLPREERRGLLELE LQNRDQELERAGLRQRELEQQLQARASEQLEAQAQNAQLWLAHEALRTQLEGAQEQLRRLEGDL QGRQEQTLREVVAVSRNMQKEKLSLLRQLELLRELNTRLRDQRDACEAKRLGSGRRKALAVARP PGPTCCCCCCCSWARPPRRGSGHLPSAR hide sequence

RefSeq Acc Id:	XP_013976589 ⟸ XM_014121114
- Peptide Label:	isoform X2
- UniProtKB:	A0A8P0NBV0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLELCSGPDSALTSQHMMAGNPPPLARPRKPGPGEAQEEEEEVEEAGSVRPRAEMLQQAQELF LLCDKDAKGFITRHDLQSDLPLTPEQLEAVFESLDQAHMGFLTAWEFCLGLGKFVGVESAQGAL PSQAPEETFESGWSDVHGPGGSLEEEEEEEEERVGQALEQLGVAPVLGEQRAVRTLWTRLQRER PELLGSFEDVLMRASACLEEAARERDSLEQALRRRESEHEREVRCLYEEMEQQLREQRQRLRTQ DLPREERRGLLELELQNRDQELERAGLRQRELEQQLQARASEQLEAQAQNAQLWLAHEALRTQL EGAQEQLRRLEGDLQGRQEQTLREVVAVSRNMQKEKLSLLRQLELLRELNTRLRDQRDACEAKR LGSGRRKALAVARPPGPTCCCCCCCSWARPPRRGSGHLPSAR hide sequence

RefSeq Acc Id:

ENSCAFP00000014036 ⟸ ENSCAFT00000015167

RefSeq Acc Id:

ENSCAFP00000061143 ⟸ ENSCAFT00000087302

RefSeq Acc Id:	XP_038356792 ⟸ XM_038500864
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038483570 ⟸ XM_038627642
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038483573 ⟸ XM_038627645
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038483571 ⟸ XM_038627643
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038483572 ⟸ XM_038627644
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038280521 ⟸ XM_038424593
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3N3P4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038280524 ⟸ XM_038424596
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3N3P4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038280522 ⟸ XM_038424594
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3N3P4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038280523 ⟸ XM_038424595
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3N3P4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038310042 ⟸ XM_038454114
- Peptide Label:	isoform X1
- UniProtKB:	A0A8P0NBV0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038310043 ⟸ XM_038454115
- Peptide Label:	isoform X1
- UniProtKB:	A0A8P0NBV0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038419449 ⟸ XM_038563521
- Peptide Label:	isoform X1
- UniProtKB:	A0A8P0NBV0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038419452 ⟸ XM_038563524
- Peptide Label:	isoform X2
- UniProtKB:	A0A8P0NBV0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038419450 ⟸ XM_038563522
- Peptide Label:	isoform X1
- UniProtKB:	A0A8P0NBV0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038419451 ⟸ XM_038563523
- Peptide Label:	isoform X1
- UniProtKB:	A0A8P0NBV0 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845009253 ⟸ ENSCAFT00845011861

RefSeq Acc Id:

ENSCAFP00845009272 ⟸ ENSCAFT00845011882

RefSeq Acc Id:

ENSCAFP00845009239 ⟸ ENSCAFT00845011842

Protein Domains

EF-hand

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000009553	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00845006671	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000015167.6	UniProtKB/TrEMBL
	ENSCAFT00000087302.2	UniProtKB/TrEMBL
	ENSCAFT00845011842	ENTREZGENE
	ENSCAFT00845011842.1	UniProtKB/TrEMBL
	ENSCAFT00845011861.1	UniProtKB/TrEMBL
	ENSCAFT00845011882.1	UniProtKB/TrEMBL
Gene3D-CATH	EF-hand	UniProtKB/TrEMBL
InterPro	EF-hand-dom_pair	UniProtKB/TrEMBL
	EF_hand_dom	UniProtKB/TrEMBL
NCBI Gene	CRACR2B	ENTREZGENE
PANTHER	CALCIUM-BINDING PROTEIN 8	UniProtKB/TrEMBL
	CALCIUM-BINDING PROTEIN 8-RELATED	UniProtKB/TrEMBL
PROSITE	EF_HAND_2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47473	UniProtKB/TrEMBL
UniProt	A0A8I3N0K2_CANLF	UniProtKB/TrEMBL
	A0A8I3N3K1_CANLF	UniProtKB/TrEMBL
	A0A8I3N3P4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0NBV0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0TCW1_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:39590	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar