NAB1 (NGFI-A binding protein 1) - Rat Genome Database

Name: NAB1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: NAB1 (NGFI-A binding protein 1) Canis lupus familiaris

Analyze

Symbol:

NAB1

Name:

NGFI-A binding protein 1

RGD ID:

12234055

Description:

INVOLVED IN endochondral ossification (inferred); myelination (inferred); negative regulation of transcription, DNA-templated (inferred); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); INTERACTS WITH enalapril; metoprolol; ranolazine

Type:

protein-coding

RefSeq Status:

MODEL

Also known as:

LOW QUALITY PROTEIN: NGFI-A-binding protein 1; NGFI-A-binding protein 1

RGD Orthologs

Human

Mouse

Rat

Chinchilla

Bonobo

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NAB1 (NGFI-A binding protein 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Nab1 (Ngfi-A binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Nab1 (Ngfi-A binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Nab1 (NGFI-A binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NAB1 (NGFI-A binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Nab1 (NGFI-A binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NAB1 (NGFI-A binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	NAB1 (NGFI-A binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Nab1 (NGFI-A binding protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	37	1,207,638 - 1,241,610 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	37	1,207,619 - 1,243,546 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Neurodevelopmental Disorders (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

enalapril (EXP)

metoprolol (EXP)

ranolazine (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

endochondral ossification (IEA)

myelination (IEA)

negative regulation of transcription, DNA-templated (IEA)

regulation of epidermis development (IEA)

regulation of transcription, DNA-templated (IBA)

Schwann cell differentiation (IEA)

Cellular Component

nucleus (IBA)

Molecular Function

transcription coregulator activity (IBA)

transcription factor binding (IBA)

References

Genomics

Comparative Map Data

NAB1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	37	1,207,638 - 1,241,610 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	37	1,207,619 - 1,243,546 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

NAB1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	2	190,646,746 - 190,692,766 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	2	190,648,860 - 190,692,766 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	2	191,513,621 - 191,557,492 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	191,222,093 - 191,265,737 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	2	191,339,353 - 191,382,997	NCBI
Celera	2	185,108,599 - 185,152,244 (+)	NCBI
Cytogenetic Map	2	q32.2	NCBI
HuRef	2	183,373,298 - 183,416,985 (+)	NCBI		HuRef
CHM1_1	2	191,519,418 - 191,563,428 (+)	NCBI		CHM1_1

Nab1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	52,495,008 - 52,539,679 (-)	NCBI	GRCm39		mm39
GRCm38	1	52,455,849 - 52,500,712 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	52,457,294 - 52,500,679 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	52,512,693 - 52,557,292 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	1	52,402,423 - 52,444,902 (-)	NCBI			mm8
Celera	1	52,994,293 - 53,038,893 (-)	NCBI		Celera
Cytogenetic Map	1	C1.1	NCBI
cM Map	1	26.99	NCBI

Nab1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rnor_6.0	9	53,906,073 - 53,945,474 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	53,906,073 - 53,945,473 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	53,571,213 - 53,610,613 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	46,084,090 - 46,124,259 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	9	46,085,564 - 46,123,090 (+)	NCBI
Celera	9	46,720,081 - 46,759,582 (+)	NCBI		Celera
Cytogenetic Map	9	q22	NCBI

Nab1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	8,456,572 - 8,487,749 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955403	8,456,572 - 8,487,749 (-)	NCBI	ChiLan1.0	ChiLan1.0

NAB1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	2B	195,868,102 - 195,911,497 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	195,868,102 - 195,911,497 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	2B	77,949,948 - 77,994,888 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

Nab1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936506	7,503,544 - 7,548,981 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NAB1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	95,248,842 - 95,295,181 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	95,248,703 - 95,295,078 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	106,592,271 - 106,602,122 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NAB1
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	76,164,199 - 76,206,898 (+)	NCBI
ChlSab1.1 Ensembl	10	76,174,592 - 76,204,464 (+)	Ensembl

Nab1
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624854	5,393,525 - 5,423,580 (-)	NCBI

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	5	4	22	6	6	6	6		12	6	10	6
Low		1						6		2
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038447412	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038447413	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038463635	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038463636	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038521478	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038521479	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038585177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038585178	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038649586	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000368	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSCAFT00000015087 ⟹ ENSCAFP00000013960

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	37	1,207,638 - 1,241,610 (+)	Ensembl

RefSeq Acc Id:

XM_022414991 ⟹ XP_022270699

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	37	1,207,619 - 1,243,546 (+)	NCBI

Sequence:

show sequence

GTCCCGCGCTTCGCCGGGGATGGCCGCGGCCTTGCCCAGGACGCTGGGGGAGCTGCAGCTCTAC
CGCATACTGCAGAGGGCCAACCTGCTCTCGTACTTCGACGCCTTCATCCAGCAAGGCGGGGATG
ACGTGCAGCAGCTGTGCGAGGCCGGGGAGGAGGAGTTCCTGGAGATCATGGCGCTCGTGGGCAT
GGCCAGCAAGCCGCTGCACGTCAGGAGGCTGCAGAAGGCCCTGCGGGACTGGGTCACCAACCCC
GGCCTCTTCAACCAGCCGCTGACGTCGCTGCCCGTGAGCAGCATCCCCGTGTACAAGGTGCCCG
ACGGCTCCGCGGCGTGGCTCGGGGTGCCCTGCGGCGGCCTCGACAGGGCCAGCGGCGCGCGCGA
GCCCCACGCGCAGGCGCCCAAGTGCGCCGCGGCCACGTGCGTGCAGGGCGCGGGCCCCGGGCGG
CCGGCGGCGCCGGGCGGCCTCGTGCTGCCGGCCGTGGGCGAGCCGCGGCTGTGGACGGGCCCGC
GCGGCCCCGACAGCGAGCCCAGCCTGTCCCCCGGCGACCTGGGCTCCCCCGCGTCCCCGAGGGA
GGGCGGCGAGGCGCTGGACGCGGCCGCCGCGCTCTCTGTGGCCGAGTGCGTGGAGCGCCTGGCC
GCCACGCTGCCCCGCAGCGACCTGGGCGAGGTGCGGGAGCTGCTCCGGAGCAACAAGAAGCTGG
CCAAGATGGTCGGCCACATCTTCTACATGAGCGCCGACTACCCGCACAAGGAGGAGGAGATCCG
CAAGTACAGCGCCCTCTACGGCCGCTTCTACTCCAAAAGGAAGGACGGGAAGCACCTGNNNNNN
NCACAGCTCACTGTTAATGAAGCGGCTGCTCAGCTCTGTGTGAAGGATAATGCCCTGCTGACAA
GAAGAGATGAACTGTTTGCCCTGGCGAGGCAGATTTCTCGAGAAGTCACCTACAAATATACCTA
CAGAACCACCAAGTCAAAATGTGGAGAAAGAGATGAATTGTCCCCAAAAAGAATTAAAGTGGAG
GATGGATTTCCAGATTTCCAGGACTCTATGCAAACACTCTTCCAGCAAGCTAAAGCTAAGAGTG
AAGAACTCGCTGCTCTTGGTTCACAGCCTGAAAAGGTGATGGCAAAGCAGATGGAGTTCCTTTG
CACCCCAGCTGGCTATGAGAGACTGCAGCATGCTGAGAGAAGACTCTCTGCAGGACTTTACAGG
CAAACCTCAGAAGAGCACAGCCCTAATGGTGTGACTTCTGATAATTCTGATGGACAAGGAGAAA
GACCTTTGAATCTCCGAATGCCTAATTTACAGAACAGACAACCGCATCATTTTGTGGTGGATGG
AGAGCTGAGTAGACTTTACTCCAGTGAGGCAAAGTCCCAGTCAGAGAATCTTGGGATTTTAAAA
GACTACCCTCACTCAGCTTTTACTTTAGAAAAGAAAGTCATCAAAACAGAGCCTGAAGATTCAA
GATAGCTGTGATTCTCCCACTATTCTCTGGAAATGGCATTCGATTTAAGGATAATGCTCCATCA
TAGAAATAAGCCTTAATAACCAACGTTGCCTCATTCAGCTCAAACAGATTCATAGCCAAAGCAT
AAGGACTGATACGGTAGTCTGCGGAAACCAGGAAGACAAAACAACAGCCACAAAAGAGAAAATT
GAGAGAATGTTGCAGTCTGTAACAGAAATATTGATCCATTCACATTCCTGTGTAAGTCATTTTA
TGTAGAAAAGCTTACAAATTAATATTGTAAGCATTCATTATTTAAGAATGTACAATGTATTTGT
CTAATTTATAGAAGTAAAATCTAGATGTGGAGGCCTTTTGGTCCAATAAATGTGGAAACAGTTT
ATTTTACTTGAAATTTCACTGTCTACTTTTAAGTGTGTTTAGCATAAAATTATATGTTAGTTTA
GAATCTTTGCAGTCATAAAGAAAGTTTAAGTGATGTAGTTATTGGCAGGGTTGCAGTGACTTTG
GAAAAATGGAAAGCAAATGCTCAACTTAAACCAAGGAAAATATTGTGGATTTAATATTTGATAA
AACTGATTTTGTTTAACGGGAAATGTGTCATTTTTAGTCGTAAAATGTCACTTTTGCTGGCTTA
GTCAGGCACATTTATGCAATTAATAAATACTAAAGTAAAGTTAAAAAGATGAGCAATAGAGTAG
AAATCTCTTACTTAGTTGACTCAGAATGCTTATATCATTATATCATAAAAATAGGAAGCTACTA
CTTGGACAAAGAACTTGAAACAACTGAACTGATGTGCAAAAGCCGTGACTTAAATATTGCTATT
TAAGAAGGTGTTGAATGGATTAAGACATATGTAAGTTAACCCCAAATGTGAAAAGGATGGTGAC
TGTTAAAAAGGCTCTAATAATATAATAGAGTGAGAACCATTTTATAGGTTGAAATTCTTCTTTA
TGTCCTGGATGGAATCAGAGAAAGTCGGGGCTCGCCCAGACCATACAGGTGTGGACAATCACTA
CCCCACATTTGCAGGCATAATTCTGAGGAGGTTTAGTTGACACCTGGATTCGTTATTTATTTCA
CAACCTTGTATGCCTTTCATATATGTGTATGCAGTTTTTTCTTAAGATCCATTTTAGCTTGAAA
GTATGTTTTCATCCCTTCCCCCTATTTAATTAATAGGCTGTGTGCATATTTGGGGGTGTGTGTG
TGACTAAATGTTAATAATGTCCTTGCATACTTATGAGAATTACACATTGGAATCCATGGTTTAA
AAAAAAAATACTATTTCTGCCAATTTACATTTTTTCTTTTGGTTTAAGAGAAGATATTTGACAG
CTTACCTACTTCCTCCAGATTCATCTAAACCCAGGTATTGCTGAGAACAGCATACTGAACTGGA
ATATGTGGTTTTTTGGTTTTTAGTTCTGCTCTAGGTCATAACTGCGTAAAAAAAAATATTAAGT
CATAATTTGTTATACTAAAATTCATCAGCCACATGTTAGATGAAATGTCTGGACTGTAGTCTCT
GATCACTGTCACATATATAATTGCTTTTTCATTTTGATTTGTAGACTAGCTTTACGGTAGAAAC
ACCAGTAAACAACTTTTATACTATTGAAAGGCTCTTTTTCCTACCTAAATGTTTTAATTGTACC
ATAGTGTTTTGCCCACTGAAGAAGCTTTTTATGGACCTTGCAACTTTGTTGCTAGCTTGAGGTT
GATTATTGTGGTTGTATTGTTCACTGTGTGTAGAAATAGTATGAGTACAATTTAAATAGATTGT
TCAGTTTTTAATATTAGCCATAGAACTGGTTAGTATCTCAGTAGTTTCATGAAACGTTTCCTGT
ATTCTAATCTATTTTGAGAAATTTTGTGGGTTTTTTTTAATTGTGTCTTACAGTTCAAGTTTGT
AGATTTTAATAAGCAACAATTTTTAAAGATGCGGTAATCTTCCAGTTAATATTTATCTGTCTTT
CATGGACCCACACACTGCATCTGCATCTTTAAATCCATAAATAAGTTTCCTTAAGTATCATACT
TTCCTGGTCTTTCAAGCGTAATGATAAGGGGGAAGCACAAGAAAAATTTCAGTAGAATACAGTT
TTTATTTTGTAAACACTAATGTATTAAATTTGCTATACATTGAAGCAAATAATATATATTTTTA
TTTGAATTGTATATATGAATTGGATGTTATAACTAGTTGATTTTTTTCATTGTGTTAGAGGTAT
TTTCACTGAACAAGGTCAATTGGTTACCTCAGTATTACAGCCAATATAGTCCAAGGGACCATTT
CTCCCCAAGTCTGTGTTGTACTTTATTATGTGAAGTCTGCGTTTCTGTGACTCTTAAATCTGTT
GGTGAGGTGGGACGAGTGCACTTGCTTCCTGTGGCAATAAAGATTTTCTGTGCCTCACACA

hide sequence

RefSeq Acc Id:

XM_545569 ⟹ XP_545569

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	37	1,207,619 - 1,243,546 (+)	NCBI

Sequence:

show sequence

GTCCCGCGCTTCGCCGGGGATGGCCGCGGCCTTGCCCAGGACGCTGGGGGAGCTGCAGCTCTAC
CGCATACTGCAGAGGGCCAACCTGCTCTCGTACTTCGACGCCTTCATCCAGCAAGGCGGGGATG
ACGTGCAGCAGCTGTGCGAGGCCGGGGAGGAGGAGTTCCTGGAGATCATGGCGCTCGTGGGCAT
GGCCAGCAAGCCGCTGCACGTCAGGAGGCTGCAGAAGGCCCTGCGGGACTGGGTCACCAACCCC
GGCCTCTTCAACCAGCCGCTGACGTCGCTGCCCGTGAGCAGCATCCCCGTGTACAAGGTGCCCG
ACGGCTCCGCGGCGTGGCTCGGGGTGCCCTGCGGCGGCCTCGACAGGGCCAGCGGCGCGCGCGA
GCCCCACGCGCAGGCGCCCAAGTGCGCCGCGGCCACGTGCGTGCAGGGCGCGGGCCCCGGGCGG
CCGGCGGCGCCGGGCGGCCTCGTGCTGCCGGCCGTGGGCGAGCCGCGGCTGTGGACGGGCCCGC
GCGGCCCCGACAGCGAGCCCAGCCTGTCCCCCGGCGACCTGGGCTCCCCCGCGTCCCCGAGGGA
GGGCGGCGAGGCGCTGGACGCGGCCGCCGCGCTCTCTGTGGCCGAGTGCGTGGAGCGCCTGGCC
GCCACGCTGCCCCGCAGCGACCTGGGCGAGGTGCGGGAGCTGCTCCGGAGCAACAAGAAGCTGG
CCAAGATGGTCGGCCACATCTTCTACATGAGCGCCGACTACCCGCACAAGGAGGAGGAGATCCG
CAAGTACAGCGCCCTCTACGGCCGCTTCTACTCCAAAAGGAAGGACGGGAAGCACCTGNNNNNN
NCACAGCTCACTGTTAATGAAGCGGCTGCTCAGCTCTGTGTGAAGGATAATGCCCTGCTGACAA
GAAGAGATGAACTGTTTGCCCTGGCGAGGCAGATTTCTCGAGAAGTCACCTACAAATATACCTA
CAGAACCACCAAGTCAAAATGTGGAGAAAGAGATGAATTGTCCCCAAAAAGAATTAAAGTGGAG
GATGGATTTCCAGATTTCCAGGACTCTATGCAAACACTCTTCCAGCAAGCTAAAGCTAAGAGTG
AAGAACTCGCTGCTCTTGGTTCACAGCAGCCTGAAAAGGTGATGGCAAAGCAGATGGAGTTCCT
TTGCACCCCAGCTGGCTATGAGAGACTGCAGCATGCTGAGAGAAGACTCTCTGCAGGACTTTAC
AGGCAAACCTCAGAAGAGCACAGCCCTAATGGTGTGACTTCTGATAATTCTGATGGACAAGGAG
AAAGACCTTTGAATCTCCGAATGCCTAATTTACAGAACAGACAACCGCATCATTTTGTGGTGGA
TGGAGAGCTGAGTAGACTTTACTCCAGTGAGGCAAAGTCCCAGTCAGAGAATCTTGGGATTTTA
AAAGACTACCCTCACTCAGCTTTTACTTTAGAAAAGAAAGTCATCAAAACAGAGCCTGAAGATT
CAAGATAGCTGTGATTCTCCCACTATTCTCTGGAAATGGCATTCGATTTAAGGATAATGCTCCA
TCATAGAAATAAGCCTTAATAACCAACGTTGCCTCATTCAGCTCAAACAGATTCATAGCCAAAG
CATAAGGACTGATACGGTAGTCTGCGGAAACCAGGAAGACAAAACAACAGCCACAAAAGAGAAA
ATTGAGAGAATGTTGCAGTCTGTAACAGAAATATTGATCCATTCACATTCCTGTGTAAGTCATT
TTATGTAGAAAAGCTTACAAATTAATATTGTAAGCATTCATTATTTAAGAATGTACAATGTATT
TGTCTAATTTATAGAAGTAAAATCTAGATGTGGAGGCCTTTTGGTCCAATAAATGTGGAAACAG
TTTATTTTACTTGAAATTTCACTGTCTACTTTTAAGTGTGTTTAGCATAAAATTATATGTTAGT
TTAGAATCTTTGCAGTCATAAAGAAAGTTTAAGTGATGTAGTTATTGGCAGGGTTGCAGTGACT
TTGGAAAAATGGAAAGCAAATGCTCAACTTAAACCAAGGAAAATATTGTGGATTTAATATTTGA
TAAAACTGATTTTGTTTAACGGGAAATGTGTCATTTTTAGTCGTAAAATGTCACTTTTGCTGGC
TTAGTCAGGCACATTTATGCAATTAATAAATACTAAAGTAAAGTTAAAAAGATGAGCAATAGAG
TAGAAATCTCTTACTTAGTTGACTCAGAATGCTTATATCATTATATCATAAAAATAGGAAGCTA
CTACTTGGACAAAGAACTTGAAACAACTGAACTGATGTGCAAAAGCCGTGACTTAAATATTGCT
ATTTAAGAAGGTGTTGAATGGATTAAGACATATGTAAGTTAACCCCAAATGTGAAAAGGATGGT
GACTGTTAAAAAGGCTCTAATAATATAATAGAGTGAGAACCATTTTATAGGTTGAAATTCTTCT
TTATGTCCTGGATGGAATCAGAGAAAGTCGGGGCTCGCCCAGACCATACAGGTGTGGACAATCA
CTACCCCACATTTGCAGGCATAATTCTGAGGAGGTTTAGTTGACACCTGGATTCGTTATTTATT
TCACAACCTTGTATGCCTTTCATATATGTGTATGCAGTTTTTTCTTAAGATCCATTTTAGCTTG
AAAGTATGTTTTCATCCCTTCCCCCTATTTAATTAATAGGCTGTGTGCATATTTGGGGGTGTGT
GTGTGACTAAATGTTAATAATGTCCTTGCATACTTATGAGAATTACACATTGGAATCCATGGTT
TAAAAAAAAAATACTATTTCTGCCAATTTACATTTTTTCTTTTGGTTTAAGAGAAGATATTTGA
CAGCTTACCTACTTCCTCCAGATTCATCTAAACCCAGGTATTGCTGAGAACAGCATACTGAACT
GGAATATGTGGTTTTTTGGTTTTTAGTTCTGCTCTAGGTCATAACTGCGTAAAAAAAAATATTA
AGTCATAATTTGTTATACTAAAATTCATCAGCCACATGTTAGATGAAATGTCTGGACTGTAGTC
TCTGATCACTGTCACATATATAATTGCTTTTTCATTTTGATTTGTAGACTAGCTTTACGGTAGA
AACACCAGTAAACAACTTTTATACTATTGAAAGGCTCTTTTTCCTACCTAAATGTTTTAATTGT
ACCATAGTGTTTTGCCCACTGAAGAAGCTTTTTATGGACCTTGCAACTTTGTTGCTAGCTTGAG
GTTGATTATTGTGGTTGTATTGTTCACTGTGTGTAGAAATAGTATGAGTACAATTTAAATAGAT
TGTTCAGTTTTTAATATTAGCCATAGAACTGGTTAGTATCTCAGTAGTTTCATGAAACGTTTCC
TGTATTCTAATCTATTTTGAGAAATTTTGTGGGTTTTTTTTAATTGTGTCTTACAGTTCAAGTT
TGTAGATTTTAATAAGCAACAATTTTTAAAGATGCGGTAATCTTCCAGTTAATATTTATCTGTC
TTTCATGGACCCACACACTGCATCTGCATCTTTAAATCCATAAATAAGTTTCCTTAAGTATCAT
ACTTTCCTGGTCTTTCAAGCGTAATGATAAGGGGGAAGCACAAGAAAAATTTCAGTAGAATACA
GTTTTTATTTTGTAAACACTAATGTATTAAATTTGCTATACATTGAAGCAAATAATATATATTT
TTATTTGAATTGTATATATGAATTGGATGTTATAACTAGTTGATTTTTTTCATTGTGTTAGAGG
TATTTTCACTGAACAAGGTCAATTGGTTACCTCAGTATTACAGCCAATATAGTCCAAGGGACCA
TTTCTCCCCAAGTCTGTGTTGTACTTTATTATGTGAAGTCTGCGTTTCTGTGACTCTTAAATCT
GTTGGTGAGGTGGGACGAGTGCACTTGCTTCCTGTGGCAATAAAGATTTTCTGTGCCTCACACA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038303340	(Get FASTA)	NCBI Sequence Viewer
	XP_038303341	(Get FASTA)	NCBI Sequence Viewer
	XP_038319563	(Get FASTA)	NCBI Sequence Viewer
	XP_038319564	(Get FASTA)	NCBI Sequence Viewer
	XP_038377406	(Get FASTA)	NCBI Sequence Viewer
	XP_038377407	(Get FASTA)	NCBI Sequence Viewer
	XP_038441105	(Get FASTA)	NCBI Sequence Viewer
	XP_038441106	(Get FASTA)	NCBI Sequence Viewer
	XP_038505514	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

XP_545569 ⟸ XM_545569

- Peptide Label:

isoform X1

- Sequence:

show sequence

MAAALPRTLGELQLYRILQRANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMASKPLH
VRRLQKALRDWVTNPGLFNQPLTSLPVSSIPVYKVPDGSAAWLGVPCGGLDRASGAREPHAQAP
KCAAATCVQGAGPGRPAAPGGLVLPAVGEPRLWTGPRGPDSEPSLSPGDLGSPASPREGGEALD
AAAALSVAECVERLAATLPRSDLGEVRELLRSNKKLAKMVGHIFYMSADYPHKEEEIRKYSALY
GRFYSKRKDGKHLXXXQLTVNEAAAQLCVKDNALLTRRDELFALARQISREVTYKYTYRTTKSK
CGERDELSPKRIKVEDGFPDFQDSMQTLFQQAKAKSEELAALGSQQPEKVMAKQMEFLCTPAGY
ERLQHAERRLSAGLYRQTSEEHSPNGVTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRL
YSSEAKSQSENLGILKDYPHSAFTLEKKVIKTEPEDSR

hide sequence

RefSeq Acc Id:

XP_022270699 ⟸ XM_022414991

- Peptide Label:

isoform X2

- Sequence:

show sequence

MAAALPRTLGELQLYRILQRANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMASKPLH
VRRLQKALRDWVTNPGLFNQPLTSLPVSSIPVYKVPDGSAAWLGVPCGGLDRASGAREPHAQAP
KCAAATCVQGAGPGRPAAPGGLVLPAVGEPRLWTGPRGPDSEPSLSPGDLGSPASPREGGEALD
AAAALSVAECVERLAATLPRSDLGEVRELLRSNKKLAKMVGHIFYMSADYPHKEEEIRKYSALY
GRFYSKRKDGKHLXXXQLTVNEAAAQLCVKDNALLTRRDELFALARQISREVTYKYTYRTTKSK
CGERDELSPKRIKVEDGFPDFQDSMQTLFQQAKAKSEELAALGSQPEKVMAKQMEFLCTPAGYE
RLQHAERRLSAGLYRQTSEEHSPNGVTSDNSDGQGERPLNLRMPNLQNRQPHHFVVDGELSRLY
SSEAKSQSENLGILKDYPHSAFTLEKKVIKTEPEDSR

hide sequence

RefSeq Acc Id:

ENSCAFP00000013960 ⟸ ENSCAFT00000015087

Protein Domains

Nab1 NCD1 NCD2

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000009496	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSCAFP00000013960	UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000015087	UniProtKB/TrEMBL
Gene3D-CATH	3.40.390.60	UniProtKB/TrEMBL
InterPro	Nab1_C	UniProtKB/TrEMBL
	NAB_co-repressor_dom	UniProtKB/TrEMBL
	NAB_fam	UniProtKB/TrEMBL
	Nab_N	UniProtKB/TrEMBL
	NCD2_sf	UniProtKB/TrEMBL
NCBI Gene	NAB1	ENTREZGENE
PANTHER	PTHR12623	UniProtKB/TrEMBL
Pfam	Nab1	UniProtKB/TrEMBL
	NCD1	UniProtKB/TrEMBL
	NCD2	UniProtKB/TrEMBL
UniProt	E2RJE1_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:43600	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar