HPGDS (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 32 | 17,172,372 - 17,196,851 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 32 | 17,121,968 - 17,196,851 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 32 | 24,752,940 - 24,777,413 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 32 | 17,315,689 - 17,375,451 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 32 | 17,351,003 - 17,375,432 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 32 | 17,323,037 - 17,347,505 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 32 | 17,137,331 - 17,161,789 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 32 | 22,730,052 - 22,754,426 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
HPGDS (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 4 | 94,298,535 - 94,342,836 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 94,298,535 - 94,342,876 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 95,219,686 - 95,263,987 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 95,438,730 - 95,483,050 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 4 | 95,577,633 - 95,612,968 | NCBI | | | | | Celera | 4 | 92,516,831 - 92,561,280 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q22.3 | NCBI | | | | | HuRef | 4 | 90,957,458 - 91,001,835 (-) | NCBI | | HuRef | | | CHM1_1 | 4 | 95,196,420 - 95,241,397 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 97,614,053 - 97,658,342 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Hpgds (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 6 | 65,094,019 - 65,121,960 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 65,094,277 - 65,121,892 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 65,117,293 - 65,144,981 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 65,117,293 - 65,144,908 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 65,067,287 - 65,094,724 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 65,048,942 - 65,074,308 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 67,246,090 - 67,273,526 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | C1 | NCBI | | | | | cM Map | 6 | 30.11 | NCBI | | | | |
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Hpgds (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 4 | 95,698,265 - 95,727,733 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 94,368,426 - 94,397,931 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 94,373,342 - 94,397,883 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 99,611,191 - 99,635,963 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 95,386,132 - 95,410,900 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 93,798,205 - 93,822,753 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 95,945,356 - 95,970,666 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 95,946,025 - 95,970,666 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 160,734,255 - 160,758,902 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 94,611,607 - 94,636,147 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 4 | 94,856,088 - 94,880,628 (-) | NCBI | | | | | Celera | 4 | 89,106,678 - 89,131,218 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q31 | NCBI | | | | |
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HPGDS (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 3 | 92,324,323 - 92,367,772 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 92,595,665 - 92,647,007 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 86,659,551 - 86,702,995 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 97,332,231 - 97,375,684 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 97,332,231 - 97,375,815 (-) | Ensembl | panpan1.1 | | panPan2 | |
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Hpgds (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405301 | 24,462,666 - 24,540,537 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936687 | 1,805,830 - 1,884,319 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936687 | 1,806,452 - 1,884,310 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
HPGDS (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 8 | 125,375,867 - 125,405,955 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 8 | 125,375,906 - 125,406,066 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 8 | 134,662,192 - 134,692,377 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
HPGDS (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 7 | 42,555,151 - 42,592,457 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 7 | 42,553,848 - 42,592,400 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 20,918,448 - 20,961,381 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Hpgds (Heterocephalus glaber - naked mole-rat) |
|