PTPN20 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 28 | 64,398 - 181,398 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 28 | 67,065 - 216,086 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 28 | 291,083 - 405,913 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 28 | 235,752 - 350,683 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 28 | 235,772 - 350,780 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 28 | 42,965 - 157,761 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 28 | 84,168 - 198,993 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 28 | 170,137 - 285,052 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
PTPN20 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 10 | 46,911,428 - 47,003,653 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 10 | 46,911,396 - 47,002,488 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 10 | 48,737,040 - 48,827,934 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 10 | 48,357,048 - 48,447,930 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 10 | 45,164,481 - 45,182,568 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | q11.22 | NCBI | | | | | HuRef | 10 | 43,492,180 - 43,529,513 (-) | NCBI | | HuRef | | | CHM1_1 | 10 | 48,901,986 - 48,992,848 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 10 | 47,800,189 - 47,916,646 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Ptpn20 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 14 | 33,311,150 - 33,362,711 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 14 | 33,311,164 - 33,362,711 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 14 | 33,589,193 - 33,640,754 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 14 | 33,589,207 - 33,640,754 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 14 | 34,402,456 - 34,453,940 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 14 | 32,418,362 - 32,469,846 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 14 | 29,843,947 - 29,895,427 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | B | NCBI | | | | | cM Map | 14 | 20.51 | NCBI | | | | |
|
Ptpn20 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 16 | 8,891,828 - 8,956,037 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 16 | 8,885,585 - 8,949,805 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 16 | 8,893,324 - 8,949,783 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 16 | 8,912,901 - 8,969,351 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 16 | 10,057,607 - 10,114,055 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 16 | 8,907,992 - 8,964,448 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 16 | 9,907,584 - 9,973,514 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 16 | 9,907,598 - 9,973,516 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 16 | 11,858,454 - 11,922,332 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 16 | 9,200,233 - 9,256,753 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 16 | 9,192,522 - 9,243,208 (+) | NCBI | | | | | Celera | 16 | 6,258,200 - 6,314,563 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | p16 | NCBI | | | | |
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Ptpn20 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955556 | 1,867,005 - 1,944,933 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955556 | 1,850,933 - 1,943,318 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
PTPN20 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 8 | 60,317,411 - 60,408,226 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 10 | 60,321,406 - 60,413,468 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 10 | 46,102,341 - 46,194,493 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | |
|
Ptpn20 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024407213 | 80,899,848 - 80,974,947 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936728 | 2,116,780 - 2,176,317 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936728 | 2,102,676 - 2,176,882 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
PTPN20 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 14 | 88,766,361 - 88,838,470 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 88,763,753 - 88,838,962 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 96,372,516 - 96,465,352 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
PTPN20 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 9 | 43,663,542 - 43,766,810 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 9 | 43,694,321 - 43,764,229 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 3,472,093 - 3,535,863 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|