HEPH (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | X | 50,989,918 - 51,102,777 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | X | 50,989,700 - 51,101,189 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | X | 41,826,463 - 41,936,925 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | X | 51,952,884 - 52,063,364 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | X | 51,952,673 - 52,063,238 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | X | 49,917,808 - 50,028,260 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 51,265,268 - 51,375,764 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 51,180,615 - 51,291,064 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
HEPH (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | X | 66,162,671 - 66,268,863 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 66,162,671 - 66,268,867 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | X | 65,382,513 - 65,488,705 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 65,299,388 - 65,403,956 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | X | 65,165,683 - 65,270,249 | NCBI | | | | | Celera | X | 65,729,951 - 65,834,741 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q12 | NCBI | | | | | HuRef | X | 59,211,026 - 59,315,881 (+) | NCBI | | HuRef | | | CHM1_1 | X | 65,275,270 - 65,380,018 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 64,590,334 - 64,696,504 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
Heph (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | X | 95,499,042 - 95,618,091 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 95,498,965 - 95,618,091 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | X | 96,455,436 - 96,574,485 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 96,455,359 - 96,574,485 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | X | 93,650,775 - 93,769,824 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 92,658,180 - 92,777,204 (+) | NCBI | | MGSCv36 | mm8 | | Celera | X | 83,458,771 - 83,577,333 (+) | NCBI | | Celera | | | Cytogenetic Map | X | C3 | NCBI | | | | | cM Map | X | 42.69 | NCBI | | | | |
|
Heph (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | X | 65,160,628 - 65,412,457 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | X | 61,151,131 - 61,402,980 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 61,296,345 - 61,402,980 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | X | 62,774,925 - 62,871,814 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | X | 66,275,451 - 66,372,352 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | X | 63,831,013 - 63,927,954 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | X | 65,377,313 - 65,658,479 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 65,563,122 - 65,658,516 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | X | 66,388,085 - 66,488,433 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | X | 84,033,540 - 84,138,728 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | X | 84,106,831 - 84,212,018 (+) | NCBI | | | | | Celera | X | 61,712,172 - 61,814,411 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q22 | NCBI | | | | |
|
Heph (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955475 | 5,625,150 - 5,704,234 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955475 | 5,625,177 - 5,704,234 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
HEPH (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | X | 65,685,190 - 65,784,061 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 65,688,838 - 65,787,666 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 55,276,887 - 55,375,719 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 65,349,638 - 65,448,388 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | X | 65,349,546 - 65,448,388 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
Heph (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | X | 51,189,534 - 51,267,810 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936635 | 1,954,947 - 2,022,101 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936635 | 1,954,771 - 2,022,061 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
HEPH (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | X | 52,314,935 - 52,397,380 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | X | 52,314,911 - 52,397,384 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | X | 58,896,080 - 58,975,042 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
HEPH (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | X | 56,093,899 - 56,186,284 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | X | 56,092,407 - 56,187,931 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666083 | 3,439,427 - 3,539,699 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Heph (Heterocephalus glaber - naked mole-rat) |
|