SNX31 (sorting nexin 31) - Rat Genome Database

Name: SNX31
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: SNX31 (sorting nexin 31) Canis lupus familiaris

Analyze

Symbol:

SNX31 (Ensembl: ANKRD46)

Name:

sorting nexin 31

RGD ID:

12216280

Description:

ENCODES a protein that exhibits phosphatidylinositol binding (inferred); INVOLVED IN intracellular protein transport (inferred); ASSOCIATED WITH Cohen syndrome (ortholog); genetic disease (ortholog); FOUND IN protein-containing complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

sorting nexin-31

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SNX31 (sorting nexin 31)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Snx31 (sorting nexin 31)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Snx31 (sorting nexin 31)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Snx31 (sorting nexin 31)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SNX31 (sorting nexin 31)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Snx31 (sorting nexin 31)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SNX31 (sorting nexin 31)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SNX31 (sorting nexin 31)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Snx31 (sorting nexin 31)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ANKRD46 (ankyrin repeat domain 46)	HGNC	EggNOG, Inparanoid, OrthoDB

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	2,425,143 - 2,497,798 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	2,385,611 - 2,498,364 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	2,422,258 - 2,494,793 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	2,578,243 - 2,650,892 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	2,537,109 - 2,651,455 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	2,422,818 - 2,495,566 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	2,534,477 - 2,607,054 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	2,551,812 - 2,624,429 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Cohen syndrome (ISO)

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

intracellular protein transport (IEA)

Cellular Component

early endosome (IEA)

membrane (IEA)

nucleus (IEA)

protein-containing complex (ISO)

Molecular Function

phosphatidylinositol binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

SNX31
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	2,425,143 - 2,497,798 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	2,385,611 - 2,498,364 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	2,422,258 - 2,494,793 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	2,578,243 - 2,650,892 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	2,537,109 - 2,651,455 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	2,422,818 - 2,495,566 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	2,534,477 - 2,607,054 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	2,551,812 - 2,624,429 (-)	NCBI		UU_Cfam_GSD_1.0

SNX31
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	100,572,874 - 100,663,585 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	100,572,889 - 100,663,415 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	101,585,102 - 101,661,893 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	101,654,299 - 101,731,069 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	8	97,770,483 - 97,847,271 (-)	NCBI		Celera
Cytogenetic Map	8	q22.3	NCBI
HuRef	8	96,784,677 - 96,860,804 (-)	NCBI		HuRef
CHM1_1	8	101,625,996 - 101,702,710 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	8	101,698,913 - 101,789,632 (-)	NCBI		T2T-CHM13v2.0

Snx31
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	36,504,208 - 36,560,274 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	36,504,208 - 36,555,718 (-)	Ensembl		GRCm39 Ensembl
GRCm38	15	36,504,062 - 36,560,129 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	36,504,062 - 36,555,573 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	36,433,817 - 36,485,327 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	36,448,651 - 36,500,161 (-)	NCBI		MGSCv36	mm8
Celera	15	37,131,901 - 37,175,770 (-)	NCBI		Celera
Cytogenetic Map	15	B3.1	NCBI
cM Map	15	14.48	NCBI

Snx31
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	69,560,948 - 69,662,015 (-)	NCBI		GRCr8
mRatBN7.2	7	67,676,514 - 67,776,925 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	67,676,524 - 67,732,086 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	7	75,308,847 - 75,364,264 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	75,309,255 - 75,364,166 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	75,456,983 - 75,512,331 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	72,015,735 - 72,070,732 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	72,036,464 - 72,097,245 (-)	NCBI
Celera	7	64,756,762 - 64,803,973 (-)	NCBI		Celera
Cytogenetic Map	7	q22	NCBI

Snx31
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955417	15,778,838 - 15,835,733 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955417	15,779,500 - 15,835,668 (-)	NCBI	ChiLan1.0	ChiLan1.0

SNX31
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	117,916,360 - 118,003,407 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	93,462,508 - 93,539,295 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	97,216,289 - 97,293,064 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	99,389,353 - 99,465,796 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	99,389,362 - 99,465,796 (-)	Ensembl	panpan1.1		panPan2

Snx31
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	35,258,158 - 35,316,885 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	42,684,346 - 42,742,092 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936470	42,684,346 - 42,743,001 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SNX31
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	36,303,284 - 36,388,952 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	36,303,313 - 36,390,214 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	39,227,961 - 39,312,750 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SNX31
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	95,427,818 - 95,515,132 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	95,428,800 - 95,502,606 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666039	45,182,262 - 45,258,685 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Snx31
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624763	7,455,924 - 7,515,155 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624763	7,455,924 - 7,515,120 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SNX31
750 total Variants

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003639447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014118549	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022426586	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022426587	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038429577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038429596	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038429602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038429611	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038492937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038492938	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038492939	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038492940	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038492941	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038492942	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038492943	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038492944	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038555204	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038555205	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038555206	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038555207	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038555208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038555209	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038555210	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038555211	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038619100	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038619101	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038619102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038619103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038619104	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038619105	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038619106	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038619107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038684718	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038684719	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038684720	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038684721	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038684722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038684723	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038684724	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038684725	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000131	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000361	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_003639447 ⟹ XP_003639495

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	13	2,425,143 - 2,497,798 (-)	NCBI
Dog10K_Boxer_Tasha	13	2,422,258 - 2,494,793 (-)	NCBI

Sequence:

show sequence

CCGCGCCGCCGCAGACCGCCACCCAGCTGCGCCCCGAGCCGGGAGCCCAGACTCGCCGCCGCGC
CTCGGCTCTGCCAGCGCCGTTCCCGGGCGGCCGACACAGCCATGAAGATGCACTTCTGTATCCC
GGTGTCCCAGCAGCGGCTGGACCGGCTGGGGGGCCGCTACGTGCTGTACTCCGTGTACCTGGAC
GGGTACCTCTTCTGCAGGGTGCGCTACAGTCAGCTGCATCGTTGGAACGAACAGCTGAGGCGGG
TCTTTGGAAATTGCCTGCCACCCTTTCCACCAAAGTACTATCTTGCAATGACCGCCTCCATGGC
TAATGAGAGAAGGGACCAGCTGGAACAATATTTGCAGAATGTAACTGTGGACCCAAACATGTTG
AGAAGTGATGTCTTCGTTGACTTTTTAAAACTCGTACAGTTGGACACATTTAGCATCACTACCA
AGACAGCCTCTCTGGATATATTTCTGCCAGATGGAAGGAATATTCAAGTCGAAATTCTAACATC
AGATACTGCTGAAAGAGTCCTAGAGGTGGTGTCACACAAAATTGGACTGTGTCAGGAGCTCTTG
GGCTACTTTGGCCTGTTTCTCATTCAGTGTTGCAAAGAGGGCAAGTTCTCTGTCATGAAAAAAT
TGGTGGACTTTGAACTGCCTTATGTGAGTCTTCAAAGTGCTAAAGTGGAAGACTGCAAAGTGGG
ACTCAGGAAGTGGTACATGGACCCATCCCTGGACTCTGTACTGATGGACTCTGCAGCAGCGGTA
GCTTTGATCTATATGCAGGCAGTTCAGGACATGGAAAAAGAATGGGCCAAACCCACACAGGTGC
AGAGGCAGAAATTAGAGGCTCTCCAGAAAGAAGACAATCAAACAAAGTTTTTGGAGCTATCCCA
AGAGGTACGGCACTATGGGTTCTTGCAGCTGGATCCCTGTACCTGTGACTACCCGGAACCCGGC
TGCAGGGCCGTCCTTTCTGTTGGCAATAATGAGATCAGCTGCTGCATAACCCTGCCTGGTAACC
AGACCCAGGAAATCATTTTCCAGATGAACAGAGTGAAGTGCTGGCAGGTCACTTTCCTTGGGAG
TCTGCTGGATATGGATGGACCCCAGAGAACTCTCAACCAGAACTTAGAGCTCAGATTTCAGTAT
AGTGAAGATAGCCGCTGGCAGTGGTTTGTTATTTACACCAAACAGGCTTTTTTGCTGAGTAGCT
GCCTGAAAAAGATGATCTCAGAAAAGATGGTAAAGCTAGCTGCAGAGAATCCAGAAATGCAGAT
TGAAGTTCCAGAACAAGGCAAAAGTAAAAAAATACCACATTCAACAAAGCCAGAAAGACTCTTG
TTTTCTACCAAGAAACAAGATTGAGATAATCAAAGTTGACTGTGTTTTTGGGACCATAATGGAA
GAAGACCTTTGAAGAGAAATTCTCACGTTTTAAAATGTCCTCTAGGGCTGTCTGGACAGTGAAA
GAGCTTGGGGATTGAACATGGGCTGCCCACCACCAGTGGAAGAAATTTGAGCCCATTCATTTTC
TTTTGATATCAAGATGGACCATATTCCCCAACACTACTTCAGGATGCTGTTAATATTAAGATTC
AAAAGAAATATGAGCCAAAGTTATACAATTTGCTTTTAATGACTCATAAGTGACAAGAGGCAAA
TCCAAATCAATTAGTGTGAAGTTTTTTGGTTTTTTGTTTTTTTTTTTACTCCAATAGATGTGTA
CCTGGCTTGATGAAGTTCTCTATATGTTCTAATATTACGTGAATGAAGGCTCACCATAAAACAC
TATAAATGTATTTGGGGTTAAGTTCTGAAGACATGACTCATCACCTGAGGATAATGTGGCTCTA
AGAAATGGAATCATTGGAAAAGAAATCTGGATTTCACTGATCCATCCATAGAACCAGAGCAAGG
AGGTGATGAAATATTAATTTCTTCCCTTACATAATTCTGATCCTACCAATAGGGATGTACTCAA
AGTAATGGGCTGCCCGGTTCTCTATTTCTCCATGGATATAATCGTATTTTATCTTTAGAATATG
GAATTCAGTTTAATAATCGCATGCTATTTTGAATATTTCTAATTTGGAAAGCAGTGTATGGGGC
CTTGCACTCAATATCAGATACTTTGTAAGTCTCTTAGCTTTAGAAGTATGTGTATTTTTTCACT
AGATTTTTCCTTATCTAGTTTCAGTTTATCATAATGAATGTAATTATATATGGAATTAAGACTG
CAGTAACGGAGAGGGACAGAGGAATCTATGTAATGTAATTAGATAAAGTGCAATATTCTAATGT
TCTTTTCTAACTGGTTTGTGTAACTAATTATGTAATAAATATGAAATATATTCTTGTGAATATA
AAATTTACTGATGAAAATCCTGAGAATGATCCTTCTGAAATATAGAATCTATTAAAGCCCTGTA
ATGTTTTTAAAGCAA

hide sequence

RefSeq Acc Id:

XM_014118549 ⟹ XP_013974024

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	13	2,425,143 - 2,497,693 (-)	NCBI
Dog10K_Boxer_Tasha	13	2,422,258 - 2,494,684 (-)	NCBI

Sequence:

show sequence

ATGAAGATGCACTTCTGTATCCCGGTGTCCCAGCAGCGGCTGGACCGGCTGGGGGGCCGCTACG
TGCTGTACTCCGTGTACCTGGACGGGTACCTCTTCTGCAGGGTGCGCTACAGTCAGCTGCATCG
TTGGAACGAACAGCTGAGGCGGGTCTTTGGAAATTGCCTGCCACCCTTTCCACCAAAGTACTAT
CTTGCAATGACCGCCTCCATGGCTAATGAGAGAAGGGACCAGCTGGAACAATATTTGCAGAATG
TAACTGTGGACCCAAACATGTTGAGAAGTGATGTCTTCGTTGACTTTTTAAAACTCGTACAGTT
GGACACATTTAGCATCACTACCAAGACAGCCTCTCTGGATATATTTCTGCCAGATGGAAGGAAT
ATTCAAGTCGAAATTCTAACATCAGATACTGCTGAAAGAGTCCTAGAGGTGGTGTCACACAAAA
TTGGACTGTGTCAGGAGCTCTTGGGCTACTTTGGCCTGTTTCTCATTCAGTGTTGCAAAGAGGG
CAAGTTCTCTGTCATGAAAAAATTGGTGGACTTTGAACTGCCTTATGTGAGTCTTCAAAGTGCT
AAAGTGGAAGACTGCAAAGTGGGACTCAGGAAGTGGTACATGGACCCATCCCTGGACTCTGTAC
TGATGGACTCTGCAGCAGCGGTAGCTTTGATCTATATGCAGGCAGTTCAGGACATGGAAAAAGA
ATGGGCCAAACCCACACAGGTGCAGAGGCAGAAATTAGAGGCTCTCCAGAAAGAAGACAATCAA
ACAAAGTTTTTGGAGCTATCCCAAGAGGTACGGCACTATGGGTTCTTGCAGCTGGATCCCTGTA
CCTGTGACTACCCGGAACCCGGCTGCAGGGCCGTCCTTTCTGTTGGCAATAATGAGATCAGCTG
CTGCATAACCCTGCCTGGTAACCAGACCCAGGAAATCATTTTCCAGATGAACAGAGTGAAGTGC
TGGCAGGTCACTTTCCTTGGGAGTCTGCTGGATATGGATGGACCCCAGAGAACTCTCAACCAGA
ACTTAGAGCTCAGATTTCAGTATAGTGAAGATAGCCGCTGGCAGTGGTTTGTTATTTACACCAA
ACAGGCTTTTTTGCTGAGTAGCTGCCTGAAAAAGATGATCTCAGAAAAGATGGTAAAGCTAGCT
GCAGAGAATCCAGAAATGAAAGACTCTTGTTTTCTACCAAGAAACAAGATTGAGATAATCAAAG
TTGACTGTGTTTTTGGGACCATAATGGAAGAAGACCTTTGAAGAGAAATTCTCACGTTTTAAAA
TGTCCTCTAGGGCTGTCTGGACAGTGAAAGAGCTTGGGGATTGAACATGGGCTGCCCACCACCA
GTGGAAGAAATTTGAGCCCATTCATTTTCTTTTGATATCAAGATGGACCATATTCCCCAACACT
ACTTCAGGATGCTGTTAATATTAAGATTCAAAAGAAATATGAGCCAAAGTTATACAATTTGCTT
TTAATGACTCATAAGTGACAAGAGGCAAATCCAAATCAATTAGTGTGAAGTTTTTTGGTTTTTT
GTTTTTTTTTTTACTCCAATAGATGTGTACCTGGCTTGATGAAGTTCTCTATATGTTCTAATAT
TACGTGAATGAAGGCTCACCATAAAACACTATAAATGTATTTGGGGTTAAGTTCTGAAGACATG
ACTCATCACCTGAGGATAATGTGGCTCTAAGAAATGGAATCATTGGAAAAGAAATCTGGATTTC
ACTGATCCATCCATAGAACCAGAGCAAGGAGGTGATGAAATATTAATTTCTTCCCTTACATAAT
TCTGATCCTACCAATAGGGATGTACTCAAAGTAATGGGCTGCCCGGTTCTCTATTTCTCCATGG
ATATAATCGTATTTTATCTTTAGAATATGGAATTCAGTTTAATAATCGCATGCTATTTTGAATA
TTTCTAATTTGGAAAGCAGTGTATGGGGCCTTGCACTCAATATCAGATACTTTGTAAGTCTCTT
AGCTTTAGAAGTATGTGTATTTTTTCACTAGATTTTTCCTTATCTAGTTTCAGTTTATCATAAT
GAATGTAATTATATATGGAATTAAGACTGCAGTAACGGAGAGGGACAGAGGAATCTATGTAATG
TAATTAGATAAAGTGCAATATTCTAATGTTCTTTTCTAACTGGTTTGTGTAACTAATTATGTAA
TAAATATGAAATATATTCTTGTGAATATAAAATTTACTGATGAAAATCCTGAGAATGATCCTTC
TGAAATATAGAATCTATTAAAGCCCTGTAATGTTTTTAAAGCAA

hide sequence

RefSeq Acc Id:

XM_022426586 ⟹ XP_022282294

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	13	2,425,143 - 2,497,798 (-)	NCBI
Dog10K_Boxer_Tasha	13	2,422,258 - 2,494,793 (-)	NCBI

Sequence:

show sequence

CCGCGCCGCCGCAGACCGCCACCCAGCTGCGCCCCGAGCCGGGAGCCCAGACTCGCCGCCGCGC
CTCGGCTCTGCCAGCGCCGTTCCCGGGCGGCCGACACAGCCATGAAGATGCACTTCTGTATCCC
GGTGTCCCAGCAGCGGCTGGACCGGCTGGGGGGCCGCTACGTGCTGTACTCCGTGTACCTGGAC
GGGTACCTCTTCTGCAGGGTGCGCTACAGTCAGCTGCATCGTTGGAACGAACAGCTGAGGCGGG
TCTTTGGAAATTGCCTGCCACCCTTTCCACCAAAGTACTATCTTGCAATGACCGCCTCCATGGC
TAATGAGAGAAGGGACCAGCTGGAACAATATTTGCAGAATGTAACTGTGGACCCAAACATGTTG
AGAAGTGATGTCTTCGTTGACTTTTTAAAACTCGTACAGTTGGACACATTTAGCATCACTACCA
AGACAGCCTCTCTGGATATATTTCTGCCAGATGGAAGGAATATTCAAGTCGAAATTCTAACATC
AGATACTGCTGAAAGAGTCCTAGAGGTGGTGTCACACAAAATTGGACTGTGTCAGGAGCTCTTG
GGCTACTTTGGCCTGTTTCTCATTCAGTGTTGCAAAGAGGGCAAGTTCTCTGTCATGAAAAAAT
TGGTGGACTTTGAACTGCCTTATGTGAGTCTTCAAAGTGCTAAAGTGGAAGACTGCAAAGTGGG
ACTCAGGAAGTGGTACATGGACCCATCCCTGGACTCTGTACTGATGGACTCTGCAGCAGCGGTA
GCTTTGATCTATATGCAGGCAGTTCAGGACATGGAAAAAGAATGGGCCAAACCCACACAGGTGC
AGAGGCAGAAATTAGAGGCTCTCCAGAAAGAAGACAATCAAACAAAGTTTTTGGAGCTATCCCA
AGAGGTACGGCACTATGGGTTCTTGCAGCTGGATCCCTGTACCTGTGACTACCCGGAACCCGGC
TGCAGGGCCGTCCTTTCTGTTGGCAATAATGAGATCAGCTGCTGCATAACCCTGCCTGGTAACC
AGACCCAGGAAATCATTTTCCAGATGAACAGAGTGAAGTGCTGGCAGGTCACTTTCCTTGCTTT
TTTGCTGAGTAGCTGCCTGAAAAAGATGATCTCAGAAAAGATGGTAAAGCTAGCTGCAGAGAAT
CCAGAAATGCAGATTGAAGTTCCAGAACAAGGCAAAAGTAAAAAAATACCACATTCAACAAAGC
CAGAAAGACTCTTGTTTTCTACCAAGAAACAAGATTGAGATAATCAAAGTTGACTGTGTTTTTG
GGACCATAATGGAAGAAGACCTTTGAAGAGAAATTCTCACGTTTTAAAATGTCCTCTAGGGCTG
TCTGGACAGTGAAAGAGCTTGGGGATTGAACATGGGCTGCCCACCACCAGTGGAAGAAATTTGA
GCCCATTCATTTTCTTTTGATATCAAGATGGACCATATTCCCCAACACTACTTCAGGATGCTGT
TAATATTAAGATTCAAAAGAAATATGAGCCAAAGTTATACAATTTGCTTTTAATGACTCATAAG
TGACAAGAGGCAAATCCAAATCAATTAGTGTGAAGTTTTTTGGTTTTTTGTTTTTTTTTTTACT
CCAATAGATGTGTACCTGGCTTGATGAAGTTCTCTATATGTTCTAATATTACGTGAATGAAGGC
TCACCATAAAACACTATAAATGTATTTGGGGTTAAGTTCTGAAGACATGACTCATCACCTGAGG
ATAATGTGGCTCTAAGAAATGGAATCATTGGAAAAGAAATCTGGATTTCACTGATCCATCCATA
GAACCAGAGCAAGGAGGTGATGAAATATTAATTTCTTCCCTTACATAATTCTGATCCTACCAAT
AGGGATGTACTCAAAGTAATGGGCTGCCCGGTTCTCTATTTCTCCATGGATATAATCGTATTTT
ATCTTTAGAATATGGAATTCAGTTTAATAATCGCATGCTATTTTGAATATTTCTAATTTGGAAA
GCAGTGTATGGGGCCTTGCACTCAATATCAGATACTTTGTAAGTCTCTTAGCTTTAGAAGTATG
TGTATTTTTTCACTAGATTTTTCCTTATCTAGTTTCAGTTTATCATAATGAATGTAATTATATA
TGGAATTAAGACTGCAGTAACGGAGAGGGACAGAGGAATCTATGTAATGTAATTAGATAAAGTG
CAATATTCTAATGTTCTTTTCTAACTGGTTTGTGTAACTAATTATGTAATAAATATGAAATATA
TTCTTGTGAATATAAAATTTACTGATGAAAATCCTGAGAATGATCCTTCTGAAATATAGAATCT
ATTAAAGCCCTGTAATGTTTTTAAAGCAA

hide sequence

RefSeq Acc Id:

XM_022426587 ⟹ XP_022282295

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	13	2,425,143 - 2,497,798 (-)	NCBI
Dog10K_Boxer_Tasha	13	2,422,258 - 2,494,793 (-)	NCBI

Sequence:

show sequence

CCGCGCCGCCGCAGACCGCCACCCAGCTGCGCCCCGAGCCGGGAGCCCAGACTCGCCGCCGCGC
CTCGGCTCTGCCAGCGCCGTTCCCGGGCGGCCGACACAGCCATGAAGATGCACTTCTGTATCCC
GGTGTCCCAGCAGCGGCTGGACCGGCTGGGGGGCCGCTACGTGCTGTACTCCGTGTACCTGGAC
GGGTACCTCTTCTGCAGGGTGCGCTACAGTCAGCTGCATCGTTGGAACGAACAGCTGAGGCGGG
TCTTTGGAAATTGCCTGCCACCCTTTCCACCAAAGTACTATCTTGCAATGACCGCCTCCATGGC
TAATGAGAGAAGGGACCAGCTGGAACAATATTTGCAGAATGTAACTGTGGACCCAAACATGTTG
AGAAGTGATGTCTTCGTTGACTTTTTAAAACTCGTACAGTTGGACACATTTAGCATCACTACCA
AGACAGCCTCTCTGGATATATTTCTGCCAGATGGAAGGAATATTCAAGTCGAAATTCTAACATC
AGATACTGCTGAAAGAGTCCTAGAGGTGGTGTCACACAAAATTGGACTGTGTCAGGAGCTCTTG
GGCTACTTTGGCCTGTTTCTCATTCAGTGTTGCAAAGAGGGCAAGTTCTCTGTCATGAAAAAAT
TGGTGGACTTTGAACTGCCTTATGTGAGTCTTCAAAGTGCTAAAGTGGAAGACTGCAAAGTGGG
ACTCAGGAAGTGGTACATGGACCCATCCCTGGACTCTGTACTGATGGACTCTGCAGCAGCGGTA
GCTTTGATCTATATGCAGGCAGTTCAGGACATGGAAAAAGAATGGGCCAAACCCACACAGGTGC
AGAGGCAGAAATTAGAGGCTCTCCAGAAAGAAGACAATCAAACAAAGGGGAGTCTGCTGGATAT
GGATGGACCCCAGAGAACTCTCAACCAGAACTTAGAGCTCAGATTTCAGTATAGTGAAGATAGC
CGCTGGCAGTGGTTTGTTATTTACACCAAACAGGCTTTTTTGCTGAGTAGCTGCCTGAAAAAGA
TGATCTCAGAAAAGATGGTAAAGCTAGCTGCAGAGAATCCAGAAATGCAGATTGAAGTTCCAGA
ACAAGGCAAAAGTAAAAAAATACCACATTCAACAAAGCCAGAAAGACTCTTGTTTTCTACCAAG
AAACAAGATTGAGATAATCAAAGTTGACTGTGTTTTTGGGACCATAATGGAAGAAGACCTTTGA
AGAGAAATTCTCACGTTTTAAAATGTCCTCTAGGGCTGTCTGGACAGTGAAAGAGCTTGGGGAT
TGAACATGGGCTGCCCACCACCAGTGGAAGAAATTTGAGCCCATTCATTTTCTTTTGATATCAA
GATGGACCATATTCCCCAACACTACTTCAGGATGCTGTTAATATTAAGATTCAAAAGAAATATG
AGCCAAAGTTATACAATTTGCTTTTAATGACTCATAAGTGACAAGAGGCAAATCCAAATCAATT
AGTGTGAAGTTTTTTGGTTTTTTGTTTTTTTTTTTACTCCAATAGATGTGTACCTGGCTTGATG
AAGTTCTCTATATGTTCTAATATTACGTGAATGAAGGCTCACCATAAAACACTATAAATGTATT
TGGGGTTAAGTTCTGAAGACATGACTCATCACCTGAGGATAATGTGGCTCTAAGAAATGGAATC
ATTGGAAAAGAAATCTGGATTTCACTGATCCATCCATAGAACCAGAGCAAGGAGGTGATGAAAT
ATTAATTTCTTCCCTTACATAATTCTGATCCTACCAATAGGGATGTACTCAAAGTAATGGGCTG
CCCGGTTCTCTATTTCTCCATGGATATAATCGTATTTTATCTTTAGAATATGGAATTCAGTTTA
ATAATCGCATGCTATTTTGAATATTTCTAATTTGGAAAGCAGTGTATGGGGCCTTGCACTCAAT
ATCAGATACTTTGTAAGTCTCTTAGCTTTAGAAGTATGTGTATTTTTTCACTAGATTTTTCCTT
ATCTAGTTTCAGTTTATCATAATGAATGTAATTATATATGGAATTAAGACTGCAGTAACGGAGA
GGGACAGAGGAATCTATGTAATGTAATTAGATAAAGTGCAATATTCTAATGTTCTTTTCTAACT
GGTTTGTGTAACTAATTATGTAATAAATATGAAATATATTCTTGTGAATATAAAATTTACTGAT
GAAAATCCTGAGAATGATCCTTCTGAAATATAGAATCTATTAAAGCCCTGTAATGTTTTTAAAG
CAA

hide sequence

RefSeq Acc Id:

XM_038429577 ⟹ XP_038285505

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	13	2,422,258 - 2,494,684 (-)	NCBI

RefSeq Acc Id:

XM_038429596 ⟹ XP_038285524

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	13	2,422,258 - 2,494,793 (-)	NCBI

RefSeq Acc Id:

XM_038429602 ⟹ XP_038285530

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	13	2,422,258 - 2,494,793 (-)	NCBI

RefSeq Acc Id:

XM_038429611 ⟹ XP_038285539

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	13	2,422,258 - 2,494,793 (-)	NCBI

RefSeq Acc Id:

XM_038492937 ⟹ XP_038348865

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	13	2,422,818 - 2,495,564 (-)	NCBI

RefSeq Acc Id:

XM_038492938 ⟹ XP_038348866

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	13	2,422,818 - 2,495,455 (-)	NCBI

RefSeq Acc Id:

XM_038492939 ⟹ XP_038348867

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	13	2,422,818 - 2,495,455 (-)	NCBI

RefSeq Acc Id:

XM_038492940 ⟹ XP_038348868

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	13	2,422,818 - 2,495,566 (-)	NCBI

RefSeq Acc Id:

XM_038492941 ⟹ XP_038348869

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	13	2,422,818 - 2,495,566 (-)	NCBI

RefSeq Acc Id:

XM_038492942 ⟹ XP_038348870

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	13	2,422,818 - 2,495,566 (-)	NCBI

RefSeq Acc Id:

XM_038492943 ⟹ XP_038348871

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	13	2,422,818 - 2,495,564 (-)	NCBI

RefSeq Acc Id:

XM_038492944 ⟹ XP_038348872

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	13	2,422,818 - 2,495,566 (-)	NCBI

RefSeq Acc Id:

XM_038555204 ⟹ XP_038411132

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	13	2,551,812 - 2,624,429 (-)	NCBI

RefSeq Acc Id:

XM_038555205 ⟹ XP_038411133

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	13	2,551,812 - 2,624,320 (-)	NCBI

RefSeq Acc Id:

XM_038555206 ⟹ XP_038411134

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	13	2,551,812 - 2,624,320 (-)	NCBI

RefSeq Acc Id:

XM_038555207 ⟹ XP_038411135

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	13	2,551,812 - 2,624,429 (-)	NCBI

RefSeq Acc Id:

XM_038555208 ⟹ XP_038411136

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	13	2,551,812 - 2,624,429 (-)	NCBI

RefSeq Acc Id:

XM_038555209 ⟹ XP_038411137

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	13	2,551,812 - 2,624,429 (-)	NCBI

RefSeq Acc Id:

XM_038555210 ⟹ XP_038411138

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	13	2,551,812 - 2,624,429 (-)	NCBI

RefSeq Acc Id:

XM_038555211 ⟹ XP_038411139

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	13	2,551,812 - 2,624,429 (-)	NCBI

RefSeq Acc Id:

XM_038619100 ⟹ XP_038475028

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	13	2,534,477 - 2,607,052 (-)	NCBI

RefSeq Acc Id:

XM_038619101 ⟹ XP_038475029

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	13	2,534,477 - 2,606,943 (-)	NCBI

RefSeq Acc Id:

XM_038619102 ⟹ XP_038475030

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	13	2,534,477 - 2,606,943 (-)	NCBI

RefSeq Acc Id:

XM_038619103 ⟹ XP_038475031

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	13	2,534,477 - 2,607,054 (-)	NCBI

RefSeq Acc Id:

XM_038619104 ⟹ XP_038475032

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	13	2,534,477 - 2,607,054 (-)	NCBI

RefSeq Acc Id:

XM_038619105 ⟹ XP_038475033

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	13	2,534,477 - 2,607,054 (-)	NCBI

RefSeq Acc Id:

XM_038619106 ⟹ XP_038475034

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	13	2,534,477 - 2,607,052 (-)	NCBI

RefSeq Acc Id:

XM_038619107 ⟹ XP_038475035

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	13	2,534,477 - 2,607,054 (-)	NCBI

RefSeq Acc Id:

XM_038684718 ⟹ XP_038540646

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	13	2,578,243 - 2,650,890 (-)	NCBI

RefSeq Acc Id:

XM_038684719 ⟹ XP_038540647

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	13	2,578,243 - 2,650,781 (-)	NCBI

RefSeq Acc Id:

XM_038684720 ⟹ XP_038540648

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	13	2,578,243 - 2,650,781 (-)	NCBI

RefSeq Acc Id:

XM_038684721 ⟹ XP_038540649

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	13	2,578,243 - 2,650,892 (-)	NCBI

RefSeq Acc Id:

XM_038684722 ⟹ XP_038540650

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	13	2,578,243 - 2,650,892 (-)	NCBI

RefSeq Acc Id:

XM_038684723 ⟹ XP_038540651

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	13	2,578,243 - 2,650,892 (-)	NCBI

RefSeq Acc Id:

XM_038684724 ⟹ XP_038540652

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	13	2,578,243 - 2,650,890 (-)	NCBI

RefSeq Acc Id:

XM_038684725 ⟹ XP_038540653

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	13	2,578,243 - 2,650,892 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003639495	(Get FASTA)	NCBI Sequence Viewer
	XP_013974024	(Get FASTA)	NCBI Sequence Viewer
	XP_022282294	(Get FASTA)	NCBI Sequence Viewer
	XP_022282295	(Get FASTA)	NCBI Sequence Viewer
	XP_038285505	(Get FASTA)	NCBI Sequence Viewer
	XP_038285524	(Get FASTA)	NCBI Sequence Viewer
	XP_038285530	(Get FASTA)	NCBI Sequence Viewer
	XP_038285539	(Get FASTA)	NCBI Sequence Viewer
	XP_038348865	(Get FASTA)	NCBI Sequence Viewer
	XP_038348866	(Get FASTA)	NCBI Sequence Viewer
	XP_038348867	(Get FASTA)	NCBI Sequence Viewer
	XP_038348868	(Get FASTA)	NCBI Sequence Viewer
	XP_038348869	(Get FASTA)	NCBI Sequence Viewer
	XP_038348870	(Get FASTA)	NCBI Sequence Viewer
	XP_038348871	(Get FASTA)	NCBI Sequence Viewer
	XP_038348872	(Get FASTA)	NCBI Sequence Viewer
	XP_038411132	(Get FASTA)	NCBI Sequence Viewer
	XP_038411133	(Get FASTA)	NCBI Sequence Viewer
	XP_038411134	(Get FASTA)	NCBI Sequence Viewer
	XP_038411135	(Get FASTA)	NCBI Sequence Viewer
	XP_038411136	(Get FASTA)	NCBI Sequence Viewer
	XP_038411137	(Get FASTA)	NCBI Sequence Viewer
	XP_038411138	(Get FASTA)	NCBI Sequence Viewer
	XP_038411139	(Get FASTA)	NCBI Sequence Viewer
	XP_038475028	(Get FASTA)	NCBI Sequence Viewer
	XP_038475029	(Get FASTA)	NCBI Sequence Viewer
	XP_038475030	(Get FASTA)	NCBI Sequence Viewer
	XP_038475031	(Get FASTA)	NCBI Sequence Viewer
	XP_038475032	(Get FASTA)	NCBI Sequence Viewer
	XP_038475033	(Get FASTA)	NCBI Sequence Viewer
	XP_038475034	(Get FASTA)	NCBI Sequence Viewer
	XP_038475035	(Get FASTA)	NCBI Sequence Viewer
	XP_038540646	(Get FASTA)	NCBI Sequence Viewer
	XP_038540647	(Get FASTA)	NCBI Sequence Viewer
	XP_038540648	(Get FASTA)	NCBI Sequence Viewer
	XP_038540649	(Get FASTA)	NCBI Sequence Viewer
	XP_038540650	(Get FASTA)	NCBI Sequence Viewer
	XP_038540651	(Get FASTA)	NCBI Sequence Viewer
	XP_038540652	(Get FASTA)	NCBI Sequence Viewer
	XP_038540653	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000000797.4
	ENSCAFP00000033816.4
	ENSCAFP00000056069.2
	ENSCAFP00030028793.1
	ENSCAFP00030029077.1
	ENSCAFP00030029170.1
	ENSCAFP00030029281.1
	ENSCAFP00030029403.1
	ENSCAFP00040026673.1
	ENSCAFP00040026964.1
	ENSCAFP00845039316.1
	ENSCAFP00845039407.1
	ENSCAFP00845039452
	ENSCAFP00845039452.1
	ENSCAFP00845039496
	ENSCAFP00845039496.1

RefSeq Acc Id:	XP_013974024 ⟸ XM_014118549
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0NRY5 (UniProtKB/TrEMBL), A0A8C0SVY0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKMHFCIPVSQQRLDRLGGRYVLYSVYLDGYLFCRVRYSQLHRWNEQLRRVFGNCLPPFPPKYY LAMTASMANERRDQLEQYLQNVTVDPNMLRSDVFVDFLKLVQLDTFSITTKTASLDIFLPDGRN IQVEILTSDTAERVLEVVSHKIGLCQELLGYFGLFLIQCCKEGKFSVMKKLVDFELPYVSLQSA KVEDCKVGLRKWYMDPSLDSVLMDSAAAVALIYMQAVQDMEKEWAKPTQVQRQKLEALQKEDNQ TKFLELSQEVRHYGFLQLDPCTCDYPEPGCRAVLSVGNNEISCCITLPGNQTQEIIFQMNRVKC WQVTFLGSLLDMDGPQRTLNQNLELRFQYSEDSRWQWFVIYTKQAFLLSSCLKKMISEKMVKLA AENPEMKDSCFLPRNKIEIIKVDCVFGTIMEEDL hide sequence

RefSeq Acc Id:	XP_003639495 ⟸ XM_003639447
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0NVH1 (UniProtKB/TrEMBL), A0A8I3PYW6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKMHFCIPVSQQRLDRLGGRYVLYSVYLDGYLFCRVRYSQLHRWNEQLRRVFGNCLPPFPPKYY LAMTASMANERRDQLEQYLQNVTVDPNMLRSDVFVDFLKLVQLDTFSITTKTASLDIFLPDGRN IQVEILTSDTAERVLEVVSHKIGLCQELLGYFGLFLIQCCKEGKFSVMKKLVDFELPYVSLQSA KVEDCKVGLRKWYMDPSLDSVLMDSAAAVALIYMQAVQDMEKEWAKPTQVQRQKLEALQKEDNQ TKFLELSQEVRHYGFLQLDPCTCDYPEPGCRAVLSVGNNEISCCITLPGNQTQEIIFQMNRVKC WQVTFLGSLLDMDGPQRTLNQNLELRFQYSEDSRWQWFVIYTKQAFLLSSCLKKMISEKMVKLA AENPEMQIEVPEQGKSKKIPHSTKPERLLFSTKKQD hide sequence

RefSeq Acc Id:	XP_022282295 ⟸ XM_022426587
- Peptide Label:	isoform X7
- UniProtKB:	A0A8C0JG07 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKMHFCIPVSQQRLDRLGGRYVLYSVYLDGYLFCRVRYSQLHRWNEQLRRVFGNCLPPFPPKYY LAMTASMANERRDQLEQYLQNVTVDPNMLRSDVFVDFLKLVQLDTFSITTKTASLDIFLPDGRN IQVEILTSDTAERVLEVVSHKIGLCQELLGYFGLFLIQCCKEGKFSVMKKLVDFELPYVSLQSA KVEDCKVGLRKWYMDPSLDSVLMDSAAAVALIYMQAVQDMEKEWAKPTQVQRQKLEALQKEDNQ TKGSLLDMDGPQRTLNQNLELRFQYSEDSRWQWFVIYTKQAFLLSSCLKKMISEKMVKLAAENP EMQIEVPEQGKSKKIPHSTKPERLLFSTKKQD hide sequence

RefSeq Acc Id:	XP_022282294 ⟸ XM_022426586
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I3PYW6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKMHFCIPVSQQRLDRLGGRYVLYSVYLDGYLFCRVRYSQLHRWNEQLRRVFGNCLPPFPPKYY LAMTASMANERRDQLEQYLQNVTVDPNMLRSDVFVDFLKLVQLDTFSITTKTASLDIFLPDGRN IQVEILTSDTAERVLEVVSHKIGLCQELLGYFGLFLIQCCKEGKFSVMKKLVDFELPYVSLQSA KVEDCKVGLRKWYMDPSLDSVLMDSAAAVALIYMQAVQDMEKEWAKPTQVQRQKLEALQKEDNQ TKFLELSQEVRHYGFLQLDPCTCDYPEPGCRAVLSVGNNEISCCITLPGNQTQEIIFQMNRVKC WQVTFLAFLLSSCLKKMISEKMVKLAAENPEMQIEVPEQGKSKKIPHSTKPERLLFSTKKQD hide sequence

RefSeq Acc Id:	XP_038348872 ⟸ XM_038492944
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038348870 ⟸ XM_038492942
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038348869 ⟸ XM_038492941
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038348868 ⟸ XM_038492940
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038348871 ⟸ XM_038492943
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038348865 ⟸ XM_038492937
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038348867 ⟸ XM_038492939
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038348866 ⟸ XM_038492938
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038475035 ⟸ XM_038619107
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038475033 ⟸ XM_038619105
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038475032 ⟸ XM_038619104
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038475031 ⟸ XM_038619103
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038475034 ⟸ XM_038619106
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038475028 ⟸ XM_038619100
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038475030 ⟸ XM_038619102
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038475029 ⟸ XM_038619101
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038540653 ⟸ XM_038684725
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038540651 ⟸ XM_038684723
- Peptide Label:	isoform X6
- UniProtKB:	A0A8C0SVY0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038540650 ⟸ XM_038684722
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I3PYW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038540649 ⟸ XM_038684721
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I3PYW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038540652 ⟸ XM_038684724
- Peptide Label:	isoform X7
- UniProtKB:	A0A8C0JG07 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038540646 ⟸ XM_038684718
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0NVH1 (UniProtKB/TrEMBL), A0A8I3PYW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038540648 ⟸ XM_038684720
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0NRY5 (UniProtKB/TrEMBL), A0A8C0SVY0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038540647 ⟸ XM_038684719
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3PYW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038285539 ⟸ XM_038429611
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038285530 ⟸ XM_038429602
- Peptide Label:	isoform X6
- UniProtKB:	A0A8C0SVY0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038285524 ⟸ XM_038429596
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I3PYW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038285505 ⟸ XM_038429577
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3PYW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038411139 ⟸ XM_038555211
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038411138 ⟸ XM_038555210
- Peptide Label:	isoform X7
- UniProtKB:	A0A8C0JG07 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038411137 ⟸ XM_038555209
- Peptide Label:	isoform X6
- UniProtKB:	A0A8C0SVY0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038411136 ⟸ XM_038555208
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I3PYW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038411135 ⟸ XM_038555207
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I3PYW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038411132 ⟸ XM_038555204
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0NVH1 (UniProtKB/TrEMBL), A0A8I3PYW6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038411134 ⟸ XM_038555206
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0NRY5 (UniProtKB/TrEMBL), A0A8C0SVY0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038411133 ⟸ XM_038555205
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3PYW6 (UniProtKB/TrEMBL)

Protein Domains

Promoters

RGD ID:

13685554

Promoter ID:

EPDNEW_C3622

Type:

single initiation site

Name:

SNX31_1

Description:

sorting nexin 31

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	13	2,497,786 - 2,497,846	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000000563	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030017897	UniProtKB/TrEMBL
	ENSCAFG00040016612	UniProtKB/TrEMBL
	ENSCAFG00040016688	UniProtKB/TrEMBL
	ENSCAFG00845028398	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000000870.4	UniProtKB/TrEMBL
	ENSCAFT00000038140.5	UniProtKB/TrEMBL
	ENSCAFT00000081255.2	UniProtKB/TrEMBL
	ENSCAFT00030033008.1	UniProtKB/TrEMBL
	ENSCAFT00030033324.1	UniProtKB/TrEMBL
	ENSCAFT00030033431.1	UniProtKB/TrEMBL
	ENSCAFT00030033555.1	UniProtKB/TrEMBL
	ENSCAFT00030033699.1	UniProtKB/TrEMBL
	ENSCAFT00040030686.1	UniProtKB/TrEMBL
	ENSCAFT00040031020.1	UniProtKB/TrEMBL
	ENSCAFT00845050144.1	UniProtKB/TrEMBL
	ENSCAFT00845050264.1	UniProtKB/TrEMBL
	ENSCAFT00845050323	ENTREZGENE
	ENSCAFT00845050323.1	UniProtKB/TrEMBL
	ENSCAFT00845050376	ENTREZGENE
	ENSCAFT00845050376.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.80.60	UniProtKB/TrEMBL
	1.25.40.20	UniProtKB/TrEMBL
	2.30.29.30	UniProtKB/TrEMBL
	3.30.1520.10	UniProtKB/TrEMBL
InterPro	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
	PH-like_dom_sf	UniProtKB/TrEMBL
	PX_dom	UniProtKB/TrEMBL
	PX_dom_sf	UniProtKB/TrEMBL
	SNX17-31_FERM_F1	UniProtKB/TrEMBL
	SNX17-31_FERM_F2	UniProtKB/TrEMBL
	SNX17/27/31	UniProtKB/TrEMBL
	SNX17/31_FERM	UniProtKB/TrEMBL
KEGG Report	cfa:607160	UniProtKB/TrEMBL
NCBI Gene	SNX31	ENTREZGENE
PANTHER	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
	PTHR12431	UniProtKB/TrEMBL
	SORTING NEXIN-31	UniProtKB/TrEMBL
Pfam	Ank_2	UniProtKB/TrEMBL
	PF00787	UniProtKB/TrEMBL
	SNX17-27-31_F1_FERM	UniProtKB/TrEMBL
	SNX17-31_F2_FERM	UniProtKB/TrEMBL
	SNX17_FERM_C	UniProtKB/TrEMBL
PROSITE	ANK_REP_REGION	UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/TrEMBL
	PS50195	UniProtKB/TrEMBL
SMART	ANK	UniProtKB/TrEMBL
	SM00312	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48403	UniProtKB/TrEMBL
	SSF64268	UniProtKB/TrEMBL
UniProt	A0A8C0JG07	ENTREZGENE
	A0A8C0NRY5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0NRZ8_CANLF	UniProtKB/TrEMBL
	A0A8C0NTB6_CANLF	UniProtKB/TrEMBL
	A0A8C0NUQ4_CANLF	UniProtKB/TrEMBL
	A0A8C0NVH1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0SVY0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PWX1_CANLF	UniProtKB/TrEMBL
	A0A8I3PYW6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3QNZ7_CANLF	UniProtKB/TrEMBL
	A0A8I3SBI0_CANLF	UniProtKB/TrEMBL
	A0A8P0NMR5_CANLF	UniProtKB/TrEMBL
	A0A8P0P5D5_CANLF	UniProtKB/TrEMBL
	A0A8P0S6R3_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:46638	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar