WASHC3 (WASH complex subunit 3) - Rat Genome Database

Name: WASHC3
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: WASHC3 (WASH complex subunit 3) Canis lupus familiaris

Analyze

Symbol:

WASHC3

Name:

WASH complex subunit 3

RGD ID:

12213639

Description:

INVOLVED IN actin filament polymerization (inferred); exocytosis (inferred); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (inferred); WASH complex (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

CCDC53; coiled-coil domain containing 53; WASH complex subunit CCDC53

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	WASHC3 (WASH complex subunit 3)	HGNC	EggNOG, Ensembl, HomoloGene, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Washc3 (WASH complex subunit 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Washc3 (WASH complex subunit 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	WASHC3 (WASH complex subunit 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Washc3 (WASH complex subunit 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	WASHC3 (WASH complex subunit 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	WASHC3 (WASH complex subunit 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Washc3 (WASH complex subunit 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	40,871,793 - 40,916,534 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	41,239,757 - 41,284,516 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	41,526,088 - 41,570,837 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	41,521,613 - 41,570,760 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	40,786,842 - 40,831,541 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	40,889,125 - 40,933,841 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	41,163,711 - 41,208,455 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actin filament polymerization (IEA)

exocytosis (IEA)

Cellular Component

cytoplasm (IEA)

WASH complex (IEA)

Molecular Function

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

retromer-mediated pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

WASHC3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	40,871,793 - 40,916,534 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	41,239,757 - 41,284,516 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	41,526,088 - 41,570,837 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	41,521,613 - 41,570,760 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	40,786,842 - 40,831,541 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	40,889,125 - 40,933,841 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	41,163,711 - 41,208,455 (-)	NCBI		UU_Cfam_GSD_1.0

WASHC3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	102,012,840 - 102,062,124 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	102,012,840 - 102,062,149 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	102,406,618 - 102,455,902 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	100,930,848 - 100,980,029 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	12	102,070,738 - 102,119,920 (-)	NCBI		Celera
Cytogenetic Map	12	q23.2	NCBI
HuRef	12	99,466,365 - 99,515,550 (-)	NCBI		HuRef
CHM1_1	12	102,373,375 - 102,422,566 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	101,973,971 - 102,023,257 (-)	NCBI		T2T-CHM13v2.0

Washc3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	88,036,954 - 88,160,001 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	88,036,955 - 88,082,020 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	88,201,097 - 88,324,139 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	88,201,093 - 88,246,158 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	87,663,842 - 87,708,903 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	87,630,892 - 87,675,957 (+)	NCBI		MGSCv36	mm8
Celera	10	90,178,752 - 90,223,621 (+)	NCBI		Celera
Cytogenetic Map	10	C1	NCBI
cM Map	10	43.7	NCBI

Washc3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	24,508,544 - 24,553,012 (+)	NCBI		GRCr8
mRatBN7.2	7	22,621,078 - 22,665,550 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	22,621,078 - 22,690,696 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	24,615,718 - 24,660,180 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	26,778,427 - 26,822,893 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	26,555,458 - 26,599,927 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	28,762,417 - 28,809,286 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	28,762,417 - 28,809,280 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	28,872,399 - 28,917,934 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	24,894,880 - 24,942,581 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	7	19,784,271 - 19,828,542 (+)	NCBI		Celera
Cytogenetic Map	7	q13	NCBI

WASHC3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	110,086,154 - 110,135,621 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	110,082,554 - 110,132,019 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	99,600,287 - 99,649,731 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	102,997,783 - 103,047,199 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	103,010,829 - 103,047,037 (-)	Ensembl	panpan1.1		panPan2

Washc3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	19,043,347 - 19,090,135 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936492	12,053,730 - 12,101,273 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936492	12,053,730 - 12,098,660 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

WASHC3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	82,155,256 - 82,217,300 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	82,155,253 - 82,259,552 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

WASHC3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	97,261,193 - 97,307,960 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	97,261,088 - 97,307,914 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	147,696,359 - 147,743,098 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Washc3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624750	6,215,971 - 6,251,634 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624750	6,216,242 - 6,248,526 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in WASHC3
270 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	5	5	22	6	6	6	6	6	12	8	10	6
Low
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005629294	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005629295	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022403429	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038496456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038496457	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038496458	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038496459	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038558853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038558854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038558855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038558856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038622775	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038622776	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038622777	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038622778	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038688443	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038688444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038688445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038688446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_532668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000165	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00845015773 ⟹ ENSCAFP00845012267

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	15	41,521,613 - 41,570,760 (-)	Ensembl

RefSeq Acc Id:

XM_005629294 ⟹ XP_005629351

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	40,871,793 - 40,916,531 (-)	NCBI
Dog10K_Boxer_Tasha	15	41,239,757 - 41,284,516 (-)	NCBI

Sequence:

show sequence

GGGGGTGGGCCCAGGGGGAGGTGTTGGCACATCGTTGCCGGGTTGGGCGGGCCGGGTTTGGGAG
GGCTTTGTGGGCGAGCCTCTGGTCCCCCACCCGCTGACAACATGGATGAGGACGGGCTTCCTCT
CATGGGGTCAGGCATAGACCTGACCAAGGTGCCAGCTATTCAACAGAAAAGAACGGTGGCATTT
CTAAACCAGTTTGTGGTGCACACTGTACAGTTCCTCAACCGCTTTTCTACAGTTTGTGAGGAGA
AACTAGCAGACCTTTCTCTTCGTATCCAGCAAATTGAAACAACTCTCAATATTTTAGATGCAAA
GTTGTCATCCATTCCAGGCCTAGATGATGTCACATTTGAAGTATCTCCTGTAAGCGTCACTGGT
ATCACAAATGAATCACATTCTGAAACTACTTCAGAGAAATCACAGAACAGTTTACAAGACTCTG
GACCACAGAGAAGTGAAGTAACACCAGAAAATATCTTAACTGTAGCCAAGGACCCAAGATATGC
GAGATATCTCAAAATGGTTCAAGTGGGTGTTCCAGTGATGGCAATAAGAAACAAAATGATATCA
GAAGGACTAGACCCAGATCTTCTTGAGAGGCCAGATGCTCCAGTGCCTGATGGTGAAGGTGAAA
AAAATACAGAAGAAAGTTCAGACAGTGAATCTTCTTTTAGTGACTAAGCTTAATTTTGATAACA
GTAACATATACATGTGTAGGTATACATATACATTCTATAAGAAAGAGAACCTGAACTTGAACTC
TTAATCATAAAACATCAAATGGCCATATATCCACCACCAAACTTCTTCTATGTTAAAAATAAAT
AAAGCATTTATAACCTGGCA

hide sequence

RefSeq Acc Id:

XM_005629295 ⟹ XP_005629352

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	40,871,793 - 40,916,531 (-)	NCBI
Dog10K_Boxer_Tasha	15	41,239,757 - 41,284,516 (-)	NCBI

Sequence:

show sequence

GGGGGTGGGCCCAGGGGGAGGTGTTGGCACATCGTTGCCGGGTTGGGCGGGCCGGGTTTGGGAG
GGCTTTGTGGGCGAGCCTCTGGTCCCCCACCCGCTGACAACATGGATGAGGACGGGCTTCCTCT
CATGGGGTCAGGCATAGACCTGACCAAGGTGCCAGCTATTCAACAGAAAAGAACGGTGGCATTT
CTAAACCAGTTTGTGGTGCACACTGTACAGTTCCTCAACCGCTTTTCTACAGTTTGTGAGGAGT
TGTCATCCATTCCAGGCCTAGATGATGTCACATTTGAAGTATCTCCTGTAAGCGTCACTGGTAT
CACAAATGAATCACATTCTGAAACTACTTCAGAGAAATCACAGCAGAACAGTTTACAAGACTCT
GGACCACAGAGAAGTGAAGTAACACCAGAAAATATCTTAACTGTAGCCAAGGACCCAAGATATG
CGAGATATCTCAAAATGGTTCAAGTGGGTGTTCCAGTGATGGCAATAAGAAACAAAATGATATC
AGAAGGACTAGACCCAGATCTTCTTGAGAGGCCAGATGCTCCAGTGCCTGATGGTGAAGGTGAA
AAAAATACAGAAGAAAGTTCAGACAGTGAATCTTCTTTTAGTGACTAAGCTTAATTTTGATAAC
AGTAACATATACATGTGTAGGTATACATATACATTCTATAAGAAAGAGAACCTGAACTTGAACT
CTTAATCATAAAACATCAAATGGCCATATATCCACCACCAAACTTCTTCTATGTTAAAAATAAA
TAAAGCATTTATAACCTGGCA

hide sequence

RefSeq Acc Id:

XM_022403429 ⟹ XP_022259137

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	40,871,793 - 40,916,534 (-)	NCBI
Dog10K_Boxer_Tasha	15	41,239,757 - 41,284,516 (-)	NCBI

Sequence:

show sequence

CTGGGGGGTGGGCCCAGGGGGAGGTGTTGGCACATCGTTGCCGGGTTGGGCGGGCCGGGTTTGG
GAGGGCTTTGTGGGCGAGCCTCTGGTCCCCCACCCGCTGACAACATGGATGAGGACGGGCTTCC
TCTCATGGGGTCAGGCATAGACCTGACCAAGGTGCCAGCTATTCAACAGAAAAGAACGGTGGCA
TTTCTAAACCAGTTTGTGGTGCACACTGTACAGTTCCTCAACCGCTTTTCTACAGTTTGTGAGG
AGTTGTCATCCATTCCAGGCCTAGATGATGTCACATTTGAAGTATCTCCTGTAAGCGTCACTGG
TATCACAAATGAATCACATTCTGAAACTACTTCAGAGAAATCACAGAACAGTTTACAAGACTCT
GGACCACAGAGAAGTGAAGTAACACCAGAAAATATCTTAACTGTAGCCAAGGACCCAAGATATG
CGAGATATCTCAAAATGGTTCAAGTGGGTGTTCCAGTGATGGCAATAAGAAACAAAATGATATC
AGAAGGACTAGACCCAGATCTTCTTGAGAGGCCAGATGCTCCAGTGCCTGATGGTGAAGGTGAA
AAAAATACAGAAGAAAGTTCAGACAGTGAATCTTCTTTTAGTGACTAAGCTTAATTTTGATAAC
AGTAACATATACATGTGTAGGTATACATATACATTCTATAAGAAAGAGAACCTGAACTTGAACT
CTTAATCATAAAACATCAAATGGCCATATATCCACCACCAAACTTCTTCTATGTTAAAAATAAA
TAAAGCATTTATAACCTGGCA

hide sequence

RefSeq Acc Id:

XM_038496456 ⟹ XP_038352384

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	40,786,842 - 40,831,541 (-)	NCBI

RefSeq Acc Id:

XM_038496457 ⟹ XP_038352385

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	40,786,842 - 40,831,541 (-)	NCBI

RefSeq Acc Id:

XM_038496458 ⟹ XP_038352386

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	40,786,842 - 40,831,541 (-)	NCBI

RefSeq Acc Id:

XM_038496459 ⟹ XP_038352387

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	40,786,842 - 40,831,541 (-)	NCBI

RefSeq Acc Id:

XM_038558853 ⟹ XP_038414781

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	41,163,711 - 41,208,455 (-)	NCBI

RefSeq Acc Id:

XM_038558854 ⟹ XP_038414782

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	41,163,711 - 41,208,455 (-)	NCBI

RefSeq Acc Id:

XM_038558855 ⟹ XP_038414783

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	41,163,711 - 41,208,455 (-)	NCBI

RefSeq Acc Id:

XM_038558856 ⟹ XP_038414784

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	41,163,711 - 41,208,455 (-)	NCBI

RefSeq Acc Id:

XM_038622775 ⟹ XP_038478703

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	15	40,889,125 - 40,933,841 (-)	NCBI

RefSeq Acc Id:

XM_038622776 ⟹ XP_038478704

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	15	40,889,125 - 40,933,841 (-)	NCBI

RefSeq Acc Id:

XM_038622777 ⟹ XP_038478705

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	15	40,889,125 - 40,933,841 (-)	NCBI

RefSeq Acc Id:

XM_038622778 ⟹ XP_038478706

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	15	40,889,125 - 40,933,841 (-)	NCBI

RefSeq Acc Id:

XM_038688443 ⟹ XP_038544371

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	41,526,088 - 41,570,837 (-)	NCBI

RefSeq Acc Id:

XM_038688444 ⟹ XP_038544372

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	41,526,088 - 41,570,837 (-)	NCBI

RefSeq Acc Id:

XM_038688445 ⟹ XP_038544373

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	41,526,088 - 41,570,837 (-)	NCBI

RefSeq Acc Id:

XM_038688446 ⟹ XP_038544374

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	41,526,088 - 41,570,837 (-)	NCBI

RefSeq Acc Id:

XM_532668 ⟹ XP_532668

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	40,871,793 - 40,916,531 (-)	NCBI
Dog10K_Boxer_Tasha	15	41,239,757 - 41,284,516 (-)	NCBI

Sequence:

show sequence

GGGGGTGGGCCCAGGGGGAGGTGTTGGCACATCGTTGCCGGGTTGGGCGGGCCGGGTTTGGGAG
GGCTTTGTGGGCGAGCCTCTGGTCCCCCACCCGCTGACAACATGGATGAGGACGGGCTTCCTCT
CATGGGGTCAGGCATAGACCTGACCAAGGTGCCAGCTATTCAACAGAAAAGAACGGTGGCATTT
CTAAACCAGTTTGTGGTGCACACTGTACAGTTCCTCAACCGCTTTTCTACAGTTTGTGAGGAGA
AACTAGCAGACCTTTCTCTTCGTATCCAGCAAATTGAAACAACTCTCAATATTTTAGATGCAAA
GTTGTCATCCATTCCAGGCCTAGATGATGTCACATTTGAAGTATCTCCTGTAAGCGTCACTGGT
ATCACAAATGAATCACATTCTGAAACTACTTCAGAGAAATCACAGCAGAACAGTTTACAAGACT
CTGGACCACAGAGAAGTGAAGTAACACCAGAAAATATCTTAACTGTAGCCAAGGACCCAAGATA
TGCGAGATATCTCAAAATGGTTCAAGTGGGTGTTCCAGTGATGGCAATAAGAAACAAAATGATA
TCAGAAGGACTAGACCCAGATCTTCTTGAGAGGCCAGATGCTCCAGTGCCTGATGGTGAAGGTG
AAAAAAATACAGAAGAAAGTTCAGACAGTGAATCTTCTTTTAGTGACTAAGCTTAATTTTGATA
ACAGTAACATATACATGTGTAGGTATACATATACATTCTATAAGAAAGAGAACCTGAACTTGAA
CTCTTAATCATAAAACATCAAATGGCCATATATCCACCACCAAACTTCTTCTATGTTAAAAATA
AATAAAGCATTTATAACCTGGCA

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Protein Sequences


Protein RefSeqs	XP_005629351	(Get FASTA)	NCBI Sequence Viewer
	XP_005629352	(Get FASTA)	NCBI Sequence Viewer
	XP_022259137	(Get FASTA)	NCBI Sequence Viewer
	XP_038352384	(Get FASTA)	NCBI Sequence Viewer
	XP_038352385	(Get FASTA)	NCBI Sequence Viewer
	XP_038352386	(Get FASTA)	NCBI Sequence Viewer
	XP_038352387	(Get FASTA)	NCBI Sequence Viewer
	XP_038414781	(Get FASTA)	NCBI Sequence Viewer
	XP_038414782	(Get FASTA)	NCBI Sequence Viewer
	XP_038414783	(Get FASTA)	NCBI Sequence Viewer
	XP_038414784	(Get FASTA)	NCBI Sequence Viewer
	XP_038478703	(Get FASTA)	NCBI Sequence Viewer
	XP_038478704	(Get FASTA)	NCBI Sequence Viewer
	XP_038478705	(Get FASTA)	NCBI Sequence Viewer
	XP_038478706	(Get FASTA)	NCBI Sequence Viewer
	XP_038544371	(Get FASTA)	NCBI Sequence Viewer
	XP_038544372	(Get FASTA)	NCBI Sequence Viewer
	XP_038544373	(Get FASTA)	NCBI Sequence Viewer
	XP_038544374	(Get FASTA)	NCBI Sequence Viewer
	XP_532668	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000068992.1
	ENSCAFP00030015946.1
	ENSCAFP00040027005.1
	ENSCAFP00845012267
	ENSCAFP00845012267.1

RefSeq Acc Id:	XP_005629352 ⟸ XM_005629295
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0LKP8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDEDGLPLMGSGIDLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEELSSIPGLDDVTFEV SPVSVTGITNESHSETTSEKSQQNSLQDSGPQRSEVTPENILTVAKDPRYARYLKMVQVGVPVM AIRNKMISEGLDPDLLERPDAPVPDGEGEKNTEESSDSESSFSD hide sequence

RefSeq Acc Id:	XP_005629351 ⟸ XM_005629294
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0LKP8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDEDGLPLMGSGIDLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEEKLADLSLRIQQIET TLNILDAKLSSIPGLDDVTFEVSPVSVTGITNESHSETTSEKSQNSLQDSGPQRSEVTPENILT VAKDPRYARYLKMVQVGVPVMAIRNKMISEGLDPDLLERPDAPVPDGEGEKNTEESSDSESSFS D hide sequence

RefSeq Acc Id:	XP_532668 ⟸ XM_532668
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0N532 (UniProtKB/TrEMBL), A0A8I3N9Z9 (UniProtKB/TrEMBL), A0A8C0LKP8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDEDGLPLMGSGIDLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEEKLADLSLRIQQIET TLNILDAKLSSIPGLDDVTFEVSPVSVTGITNESHSETTSEKSQQNSLQDSGPQRSEVTPENIL TVAKDPRYARYLKMVQVGVPVMAIRNKMISEGLDPDLLERPDAPVPDGEGEKNTEESSDSESSF SD hide sequence

RefSeq Acc Id:	XP_022259137 ⟸ XM_022403429
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0LKP8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDEDGLPLMGSGIDLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEELSSIPGLDDVTFEV SPVSVTGITNESHSETTSEKSQNSLQDSGPQRSEVTPENILTVAKDPRYARYLKMVQVGVPVMA IRNKMISEGLDPDLLERPDAPVPDGEGEKNTEESSDSESSFSD hide sequence

RefSeq Acc Id:	XP_038352387 ⟸ XM_038496459
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038352386 ⟸ XM_038496458
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038352385 ⟸ XM_038496457
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038352384 ⟸ XM_038496456
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038478706 ⟸ XM_038622778
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038478705 ⟸ XM_038622777
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038478704 ⟸ XM_038622776
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038478703 ⟸ XM_038622775
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038544374 ⟸ XM_038688446
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0LKP8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038544373 ⟸ XM_038688445
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0LKP8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038544372 ⟸ XM_038688444
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0LKP8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038544371 ⟸ XM_038688443
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0N532 (UniProtKB/TrEMBL), A0A8I3N9Z9 (UniProtKB/TrEMBL), A0A8C0LKP8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038414784 ⟸ XM_038558856
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0LKP8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038414783 ⟸ XM_038558855
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0LKP8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038414782 ⟸ XM_038558854
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0LKP8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038414781 ⟸ XM_038558853
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LKP8 (UniProtKB/TrEMBL), A0A8C0N532 (UniProtKB/TrEMBL), A0A8I3N9Z9 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845012267 ⟸ ENSCAFT00845015773

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000056566	UniProtKB/TrEMBL
	ENSCAFG00030009858	UniProtKB/TrEMBL
	ENSCAFG00040016820	UniProtKB/TrEMBL
	ENSCAFG00845008957	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000107271.1	UniProtKB/TrEMBL
	ENSCAFT00030018263.1	UniProtKB/TrEMBL
	ENSCAFT00040031064.1	UniProtKB/TrEMBL
	ENSCAFT00845015773	ENTREZGENE
	ENSCAFT00845015773.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.110	UniProtKB/TrEMBL
InterPro	WASHC3	UniProtKB/TrEMBL
NCBI Gene	WASHC3	ENTREZGENE
PANTHER	PTHR13015	UniProtKB/TrEMBL
	WASH COMPLEX SUBUNIT 3	UniProtKB/TrEMBL
Pfam	CCDC53	UniProtKB/TrEMBL
UniProt	A0A8C0LKP8	ENTREZGENE
	A0A8C0N532	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3N9Z9	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

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