LDB2 (LIM domain binding 2) - Rat Genome Database

Name: LDB2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: LDB2 (LIM domain binding 2) Canis lupus familiaris

Analyze

Symbol:

LDB2

Name:

LIM domain binding 2

RGD ID:

12212743

Description:

ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN cellular component biogenesis (ortholog); epithelial structure maintenance (ortholog); hair follicle development (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cell leading edge (ortholog); nucleolus (ortholog); nucleoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

LIM domain-binding protein 2

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	LDB2 (LIM domain binding 2)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Ldb2 (LIM domain binding 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ldb2 (LIM domain binding 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ldb2 (LIM domain binding 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	LDB2 (LIM domain binding 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ldb2 (LIM domain binding 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	LDB2 (LIM domain binding 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	LDB2 (LIM domain binding 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ldb2 (LIM domain binding 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	63,508,721 - 63,883,842 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	63,508,247 - 63,883,717 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	66,026,288 - 66,401,935 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	63,985,593 - 64,361,307 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	63,985,615 - 64,362,099 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	63,476,565 - 63,852,008 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	63,680,390 - 64,055,540 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	64,040,117 - 64,415,250 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular component biogenesis (ISO)

epithelial structure maintenance (ISO)

hair follicle development (ISO)

negative regulation of transcription by RNA polymerase II (IEA)

nervous system development (IEA)

positive regulation of cellular component biogenesis (ISO)

positive regulation of transcription by RNA polymerase II (IEA,ISO)

regulation of cell migration (ISO)

somatic stem cell population maintenance (ISO)

Cellular Component

cell leading edge (ISO)

nucleolus (ISO)

nucleoplasm (ISO)

nucleus (IEA)

plasma membrane (ISO)

transcription regulator complex (IEA)

Molecular Function

enzyme binding (ISO)

LIM domain binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

LDB2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	3	63,508,721 - 63,883,842 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	3	63,508,247 - 63,883,717 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	3	66,026,288 - 66,401,935 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	3	63,985,593 - 64,361,307 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	3	63,985,615 - 64,362,099 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	3	63,476,565 - 63,852,008 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	3	63,680,390 - 64,055,540 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	3	64,040,117 - 64,415,250 (+)	NCBI		UU_Cfam_GSD_1.0

LDB2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	16,501,541 - 16,898,645 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	16,501,541 - 16,898,678 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	16,503,164 - 16,900,268 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	16,112,262 - 16,509,425 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	4	16,179,434 - 16,576,596	NCBI
Celera	4	16,968,377 - 17,365,469 (-)	NCBI		Celera
Cytogenetic Map	4	p15.32	NCBI
HuRef	4	15,852,373 - 16,253,922 (-)	NCBI		HuRef
CHM1_1	4	16,501,239 - 16,898,326 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	4	16,483,292 - 16,880,253 (-)	NCBI		T2T-CHM13v2.0

Ldb2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	44,593,292 - 44,957,466 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	44,629,474 - 44,957,022 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	44,435,955 - 44,799,759 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	44,472,132 - 44,799,680 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	44,863,372 - 45,190,946 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	44,760,963 - 45,087,867 (-)	NCBI		MGSCv36	mm8
Celera	5	41,894,726 - 42,234,169 (-)	NCBI		Celera
Cytogenetic Map	5	B3	NCBI
cM Map	5	24.24	NCBI

Ldb2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	70,489,243 - 70,810,573 (+)	NCBI		GRCr8
mRatBN7.2	14	66,277,044 - 66,598,071 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	66,277,085 - 66,597,778 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	70,673,511 - 70,993,888 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	71,957,095 - 72,277,709 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	68,383,948 - 68,704,320 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	70,780,605 - 71,112,857 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	70,780,623 - 71,112,552 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	70,817,435 - 70,817,796 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Rnor_5.0	14	70,920,028 - 71,144,813 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	71,374,621 - 71,695,965 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	71,377,028 - 71,698,910 (+)	NCBI
Celera	14	65,250,557 - 65,570,430 (+)	NCBI		Celera
Cytogenetic Map	14	q21	NCBI

Ldb2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955480	7,199,933 - 7,568,629 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955480	7,200,111 - 7,568,567 (+)	NCBI	ChiLan1.0	ChiLan1.0

LDB2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	16,771,454 - 17,168,732 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	16,969,178 - 17,366,385 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	10,930,160 - 11,327,367 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	16,226,042 - 16,621,851 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	16,227,146 - 16,622,167 (-)	Ensembl	panpan1.1		panPan2

Ldb2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405285	57,497,602 - 57,837,007 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936477	11,199,003 - 11,538,728 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936477	11,199,200 - 11,538,699 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LDB2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	11,641,064 - 12,037,265 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	11,641,060 - 12,037,388 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	11,335,352 - 11,566,827 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LDB2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	27	33,303,801 - 33,698,460 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666047	80,035,660 - 80,430,270 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ldb2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624755	14,962,317 - 15,359,814 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624755	14,962,538 - 15,358,771 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in LDB2
4202 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	3		15		6		1		11		10	6
Low	2	5	7	6		6	5	6	1	8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005618544	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005618545	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005618546	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005618548	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005618551	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005618552	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014112593	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022417148	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022417150	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038472337	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038472338	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038472339	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038472340	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038472341	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038472342	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038472343	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038472344	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038472345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038472346	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038533313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038533314	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038533315	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038533316	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038533317	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038533318	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038533319	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038533320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038533321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038533322	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038597641	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038597642	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038597643	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038597644	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038597645	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038597646	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038597647	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038597648	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038597649	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038597650	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038661822	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038661823	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038661824	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038661825	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038661826	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038661827	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038661828	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038661829	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038661830	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038661831	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_536231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000074	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000024036 ⟹ ENSCAFP00000022316

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	3	63,508,247 - 63,883,549 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000082639 ⟹ ENSCAFP00000048663

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	3	63,508,247 - 63,883,717 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000082696 ⟹ ENSCAFP00000052907

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	3	63,508,247 - 63,883,549 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000093701 ⟹ ENSCAFP00000046020

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	3	63,508,247 - 63,883,407 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845001176 ⟹ ENSCAFP00845000898

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	3	63,985,615 - 64,362,099 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845001188 ⟹ ENSCAFP00845000907

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	3	63,985,615 - 64,361,192 (+)	Ensembl

RefSeq Acc Id:

XM_005618544 ⟹ XP_005618601

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	3	63,508,963 - 63,883,842 (+)	NCBI
Dog10K_Boxer_Tasha	3	66,026,514 - 66,401,935 (+)	NCBI

Sequence:

show sequence

ATGTCCAGCACACCACATGACCCCTTCTATTCTTCTCCTTTCGGCCCATTTTATAGGAGACATA
CACCCTACATGGTACAGCCAGAGTACCGAATCTATGAGATGAACAAGAGACTGCAGTCTCGCAC
AGAGGATAGTGACAACCTTTGGTGGGACGCATTTGCCACCGAGTTTTTTGAAGACGATGCCACA
TTAACCCTTTCATTTTGTTTGGAAGATGGACCAAAGCGATACACTATCGGCAGGACCCTTATCC
CTCGTTATTTTAGCACTGTGTTTGAAGGAGGGGTGACCGACCTGTATTACATCCTCAAACACTC
TAAAGAGTCATACCACAACTCATCCATCACAGTGGACTGCGACCAGTGTGCTATGGTCACCCAG
CATGGGAAGCCCATGTTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTG
ATGATCTCATGAGAATAAAAACATGGCACTTTACCATTAGACAATACAGAGAGTTAGTCCCAAG
GAGCATTCTAGCCATGCATGCACAAGATCCTCAGGTCCTGGATCAGCTGTCCAAAAACATCACC
AGGATGGGACTAACAAATTTCACCCTCAACTACCTCAGGTTGTGTGTAATACTGGAGCCAATGC
AGGAACTGATGTCGAGACATAAAACTTACAACCTCAGTCCACGAGACTGCCTGAAGACCTGCTT
GTTTCAGAAGTGGCAGCGGATGGTGGCGCCGCCAGCAGAACCCACAAGGCAGCCGACAACCAAA
CGGAGAAAAAGGAAAAACTCTACCAGCAGCACTTCCAACAGCAGCGCCGGAAACAACGCCAACA
GCACCGGCAGCAAGAAGAAGACGCCGGCCGCCAACCTGAGTCTGTCCAGTCAGGTACCTGATGT
GATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTGAGTTTGGGGACGAGGACGAAAGGCTAATC
ACTAGATTAGAAAACACGCAGTATGACGCGGCCAACGGCGTGGACGACGAGGAAGACTTCAACA
GCCCCCCCGCCCTGGGGAACAGCAGCCCTTGGAGCAGTAAACCCCCCGCCGCTCAGGAGACCAA
ATCAGAAAGCGCCCCGCCCCAGGCTCCCCAGTGAGACTGACCCGCACCCGCACCCGGACCCGCA
CCCGCACCCGCACCCGCACCCCGTGGGCCGTGGGCCGTGGGCCGTGGGCCGTGGGCTGCACCCA
CGCTTGCAGATCCCTGCTTACAGGAGAGGAAGGAGGCGAAATGAAAACTTTTCCACGCAAAAAC
CTGTTTCTAAACCACAATGACCTGAGTTTTGAGTTTCTTTTCTTTCTTTCTTTCTTTTCCTTTT
TTTGTTTTTTGGGTTTTTTTTTTTTTTTTGGTCTTTTGAATGAGAGGTTATCCAATAAACTTTC
ATGACCCTTCCCTGGAGGCCTTCACAGGTAACGCAGAGACTGGCACTGATCGTAATTAAATCAA
GAGGGCAGGCTCGCGCTTCTCCTGGCTCGGTGTTTAACCACATGTTTGTTAACGACCCCCCCTA
ACCCCCCACCCCCACCCCCAC

hide sequence

RefSeq Acc Id:

XM_005618545 ⟹ XP_005618602

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	3	63,508,721 - 63,883,842 (+)	NCBI
Dog10K_Boxer_Tasha	3	66,026,288 - 66,401,935 (+)	NCBI

Sequence:

show sequence

CCTCCCTCCCGCTCTCCCTCTCCTCTCCTGCTATAGAGGGCTCCAACAGCAGTTCCCAGCCAGT
GTGTTCAGCCTGCCTGCCTGCCCGCCTCTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTGTGTG
TGTGTGTGTGAGCGTGTGCGTGCGTCTACTTTGTACTGTGAGGAACACAGCCCATGTGCTCTGC
ATGGACGTTACTGATACTCTGTTTAGCTTGATTTTCGACAAGCAGGCAAGATGTCCAGCACACC
ACATGACCCCTTCTATTCTTCTCCTTTCGGCCCATTTTATAGGAGACATACACCCTACATGGTA
CAGCCAGAGTACCGAATCTATGAGATGAACAAGAGACTGCAGTCTCGCACAGAGGATAGTGACA
ACCTTTGGTGGGACGCATTTGCCACCGAGTTTTTTGAAGACGATGCCACATTAACCCTTTCATT
TTGTTTGGAAGATGGACCAAAGCGATACACTATCGGCAGGACCCTTATCCCTCGTTATTTTAGC
ACTGTGTTTGAAGGAGGGGTGACCGACCTGTATTACATCCTCAAACACTCTAAAGAGTCATACC
ACAACTCATCCATCACAGTGGACTGCGACCAGTGTGCTATGGTCACCCAGCATGGGAAGCCCAT
GTTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTGATGATCTCATGAGA
ATAAAAACATGGCACTTTACCATTAGACAATACAGAGAGTTAGTCCCAAGGAGCATTCTAGCCA
TGCATGCACAAGATCCTCAGGTCCTGGATCAGCTGTCCAAAAACATCACCAGGATGGGACTAAC
AAATTTCACCCTCAACTACCTCAGGTTGTGTGTAATACTGGAGCCAATGCAGGAACTGATGTCG
AGACATAAAACTTACAACCTCAGTCCACGAGACTGCCTGAAGACCTGCTTGTTTCAGAAGTGGC
AGCGGATGGTGGCGCCGCCAGAACCCACAAGGCAGCCGACAACCAAACGGAGAAAAAGGAAAAA
CTCTACCAGCAGCACTTCCAACAGCAGCGCCGGAAACAACGCCAACAGCACCGGCAGCAAGAAG
AAGACGCCGGCCGCCAACCTGAGTCTGTCCAGTCAGGTACCTGATGTGATGGTGGTAGGAGAGC
CAACTCTGATGGGAGGTGAGTTTGGGGACGAGGACGAAAGGCTAATCACTAGATTAGAAAACAC
GCAGTATGACGCGGCCAACGGCGTGGACGACGAGGAAGACTTCAACAGCCCCCCCGCCCTGGGG
AACAGCAGCCCTTGGAGCAGTAAACCCCCCGCCGCTCAGGAGACCAAATCAGAAAGCGCCCCGC
CCCAGGCTCCCCAGTGAGACTGACCCGCACCCGCACCCGGACCCGCACCCGCACCCGCACCCGC
ACCCCGTGGGCCGTGGGCCGTGGGCCGTGGGCCGTGGGCTGCACCCACGCTTGCAGATCCCTGC
TTACAGGAGAGGAAGGAGGCGAAATGAAAACTTTTCCACGCAAAAACCTGTTTCTAAACCACAA
TGACCTGAGTTTTGAGTTTCTTTTCTTTCTTTCTTTCTTTTCCTTTTTTTGTTTTTTGGGTTTT
TTTTTTTTTTTTGGTCTTTTGAATGAGAGGTTATCCAATAAACTTTCATGACCCTTCCCTGGAG
GCCTTCACAGGTAACGCAGAGACTGGCACTGATCGTAATTAAATCAAGAGGGCAGGCTCGCGCT
TCTCCTGGCTCGGTGTTTAACCACATGTTTGTTAACGACCCCCCCTAACCCCCCACCCCCACCC
CCAC

hide sequence

RefSeq Acc Id:

XM_005618546 ⟹ XP_005618603

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	3	63,508,963 - 63,883,407 (+)	NCBI
Dog10K_Boxer_Tasha	3	66,026,514 - 66,401,495 (+)	NCBI

Sequence:

show sequence

ATGTCCAGCACACCACATGACCCCTTCTATTCTTCTCCTTTCGGCCCATTTTATAGGAGACATA
CACCCTACATGGTACAGCCAGAGTACCGAATCTATGAGATGAACAAGAGACTGCAGTCTCGCAC
AGAGGATAGTGACAACCTTTGGTGGGACGCATTTGCCACCGAGTTTTTTGAAGACGATGCCACA
TTAACCCTTTCATTTTGTTTGGAAGATGGACCAAAGCGATACACTATCGGCAGGACCCTTATCC
CTCGTTATTTTAGCACTGTGTTTGAAGGAGGGGTGACCGACCTGTATTACATCCTCAAACACTC
TAAAGAGTCATACCACAACTCATCCATCACAGTGGACTGCGACCAGTGTGCTATGGTCACCCAG
CATGGGAAGCCCATGTTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTG
ATGATCTCATGAGAATAAAAACATGGCACTTTACCATTAGACAATACAGAGAGTTAGTCCCAAG
GAGCATTCTAGCCATGCATGCACAAGATCCTCAGGTCCTGGATCAGCTGTCCAAAAACATCACC
AGGATGGGACTAACAAATTTCACCCTCAACTACCTCAGGTTGTGTGTAATACTGGAGCCAATGC
AGGAACTGATGTCGAGACATAAAACTTACAACCTCAGTCCACGAGACTGCCTGAAGACCTGCTT
GTTTCAGAAGTGGCAGCGGATGGTGGCGCCGCCAGCAGAACCCACAAGGCAGCCGACAACCAAA
CGGAGAAAAAGGAAAAACTCTACCAGCAGCACTTCCAACAGCAGCGCCGGAAACAACGCCAACA
GCACCGGCAGCAAGAAGAAGACGCCGGCCGCCAACCTGAGTCTGTCCAGTCAGGATGTGATGGT
GGTAGGAGAGCCAACTCTGATGGGAGGTGAGTTTGGGGACGAGGACGAAAGGCTAATCACTAGA
TTAGAAAACACGCAGTATGACGCGGCCAACGGCGTGGACGACGAGGAAGACTTCAACAGCCCCC
CCGCCCTGGGGAACAGCAGCCCTTGGAGCAGTAAACCCCCCGCCGCTCAGGAGACCAAATCAGA
AAGCGCCCCGCCCCAGGCTCCCCAGTGA

hide sequence

RefSeq Acc Id:

XM_005618548 ⟹ XP_005618605

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	3	63,508,963 - 63,883,319 (+)	NCBI
Dog10K_Boxer_Tasha	3	66,026,514 - 66,401,408 (+)	NCBI

Sequence:

show sequence

ATGTCCAGCACACCACATGACCCCTTCTATTCTTCTCCTTTCGGCCCATTTTATAGGAGACATA
CACCCTACATGGTACAGCCAGAGTACCGAATCTATGAGATGAACAAGAGACTGCAGTCTCGCAC
AGAGGATAGTGACAACCTTTGGTGGGACGCATTTGCCACCGAGTTTTTTGAAGACGATGCCACA
TTAACCCTTTCATTTTGTTTGGAAGATGGACCAAAGCGATACACTATCGGCAGGACCCTTATCC
CTCGTTATTTTAGCACTGTGTTTGAAGGAGGGGTGACCGACCTGTATTACATCCTCAAACACTC
TAAAGAGTCATACCACAACTCATCCATCACAGTGGACTGCGACCAGTGTGCTATGGTCACCCAG
CATGGGAAGCCCATGTTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTG
ATGATCTCATGAGAATAAAAACATGGCACTTTACCATTAGACAATACAGAGAGTTAGTCCCAAG
GAGCATTCTAGCCATGCATGCACAAGATCCTCAGGTCCTGGATCAGCTGTCCAAAAACATCACC
AGGATGGGACTAACAAATTTCACCCTCAACTACCTCAGGTTGTGTGTAATACTGGAGCCAATGC
AGGAACTGATGTCGAGACATAAAACTTACAACCTCAGTCCACGAGACTGCCTGAAGACCTGCTT
GTTTCAGAAGTGGCAGCGGATGGTGGCGCCGCCAGCAGAACCCACAAGGCAGCCGACAACCAAA
CGGAGAAAAAGGAAAAACTCTACCAGCAGCACTTCCAACAGCAGCGCCGGAAACAACGCCAACA
GCACCGGCAGCAAGAAGAAGACGCCGGCCGCCAACCTGAGTCTGTCCAGTCAGGTACCTGGGCT
AGGAGCGATCCCGAACTGCAGCCTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAGCA
GTGACCCCTTCTGGCCAATTTAAGGAGAAGCATTGAGGGGCCCTGAAAGGAGTCACTTCCAGTC
CTCCTCAGAGATTGCTAGCATTGCTCGTTCTCCGGTGTCAGGCTGCGCAGTAAGGACATAAACT
CGCGTGGTTGTTCCACGTCAGGAGGCAATGTTTATTTCCTGTAGAAATCAAATATGCGTCTCGG
CCCCGCCCCCCGACTTTGAGACTTGACCCCGGGGCACAGCACGCGAGCGCGTCGGTCCCAGACC
CCCCAGCTCCTCCCACTAGTGTTTTAAGCTGAGCTTCTTGTCCCAAGGTTTCCCTGTAATAATG
TCAGCTGCTGTTCACAGGATGTGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTGAGTTTGG
GGACGAGGACGAAAGGCTAATCACTAGATTAGAAAACACGCAGTATGACGCGGCCAACGGCGTG
GACGACGAGGAAGACTTCAACAGCCCCCCCGC

hide sequence

RefSeq Acc Id:

XM_005618551 ⟹ XP_005618608

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	3	63,508,963 - 63,883,319 (+)	NCBI
Dog10K_Boxer_Tasha	3	66,026,514 - 66,401,408 (+)	NCBI

Sequence:

show sequence

ATGTCCAGCACACCACATGACCCCTTCTATTCTTCTCCTTTCGGCCCATTTTATAGGAGACATA
CACCCTACATGGTACAGCCAGAGTACCGAATCTATGAGATGAACAAGAGACTGCAGTCTCGCAC
AGAGGATAGTGACAACCTTTGGTGGGACGCATTTGCCACCGAGTTTTTTGAAGACGATGCCACA
TTAACCCTTTCATTTTGTTTGGAAGATGGACCAAAGCGATACACTATCGGCAGGACCCTTATCC
CTCGTTATTTTAGCACTGTGTTTGAAGGAGGGGTGACCGACCTGTATTACATCCTCAAACACTC
TAAAGAGTCATACCACAACTCATCCATCACAGTGGACTGCGACCAGTGTGCTATGGTCACCCAG
CATGGGAAGCCCATGTTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTG
ATGATCTCATGAGAATAAAAACATGGCACTTTACCATTAGACAATACAGAGAGTTAGTCCCAAG
GAGCATTCTAGCCATGCATGCACAAGATCCTCAGGTCCTGGATCAGCTGTCCAAAAACATCACC
AGGATGGGACTAACAAATTTCACCCTCAACTACCTCAGGTTGTGTGTAATACTGGAGCCAATGC
AGGAACTGATGTCGAGACATAAAACTTACAACCTCAGTCCACGAGACTGCCTGAAGACCTGCTT
GTTTCAGAAGTGGCAGCGGATGGTGGCGCCGCCAGCAGAACCCACAAGGCAGCCGACAACCAAA
CGGAGAAAAAGGAAAAACTCTACCAGCAGCACTTCCAACAGCAGCGCCGGAAACAACGCCAACA
GCACCGGCAGCAAGAAGAAGACGCCGGCCGCCAACCTGAGTCTGTCCAGTCAGGTACCTATTGC
TAGCATTGCTCGTTCTCCGGTGTCAGGCTGCGCAGTAAGGACATAAACTCGCGTGGTTGTTCCA
CGTCAGGAGGCAATGTTTATTTCCTGTAGAAATCAAATATGCGTCTCGGCCCCGCCCCCCGACT
TTGAGACTTGACCCCGGGGCACAGCACGCGAGCGCGTCGGTCCCAGACCCCCCAGCTCCTCCCA
CTAGTGTTTTAAGCTGAGCTTCTTGTCCCAAGGTTTCCCTGTAATAATGTCAGCTGCTGTTCAC
AGGATGTGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTGAGTTTGGGGACGAGGACGAAAG
GCTAATCACTAGATTAGAAAACACGCAGTATGACGCGGCCAACGGCGTGGACGACGAGGAAGAC
TTCAACAGCCCCCCCGC

hide sequence

RefSeq Acc Id:

XM_005618552 ⟹ XP_005618609

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	3	63,508,963 - 63,883,319 (+)	NCBI
Dog10K_Boxer_Tasha	3	66,026,514 - 66,401,408 (+)	NCBI

Sequence:

show sequence

ATGTCCAGCACACCACATGACCCCTTCTATTCTTCTCCTTTCGGCCCATTTTATAGGAGACATA
CACCCTACATGGTACAGCCAGAGTACCGAATCTATGAGATGAACAAGAGACTGCAGTCTCGCAC
AGAGGATAGTGACAACCTTTGGTGGGACGCATTTGCCACCGAGTTTTTTGAAGACGATGCCACA
TTAACCCTTTCATTTTGTTTGGAAGATGGACCAAAGCGATACACTATCGGCAGGACCCTTATCC
CTCGTTATTTTAGCACTGTGTTTGAAGGAGGGGTGACCGACCTGTATTACATCCTCAAACACTC
TAAAGAGTCATACCACAACTCATCCATCACAGTGGACTGCGACCAGTGTGCTATGGTCACCCAG
CATGGGAAGCCCATGTTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTG
ATGATCTCATGAGAATAAAAACATGGCACTTTACCATTAGACAATACAGAGAGTTAGTCCCAAG
GAGCATTCTAGCCATGCATGCACAAGATCCTCAGGTCCTGGATCAGCTGTCCAAAAACATCACC
AGGATGGGACTAACAAATTTCACCCTCAACTACCTCAGGTTGTGTGTAATACTGGAGCCAATGC
AGGAACTGATGTCGAGACATAAAACTTACAACCTCAGTCCACGAGACTGCCTGAAGACCTGCTT
GTTTCAGAAGTGGCAGCGGATGGTGGCGCCGCCAGCAGAACCCACAAGGCAGCCGACAACCAAA
CGGAGAAAAAGGAAAAACTCTACCAGCAGCACTTCCAACAGCAGCGCCGGAAACAACGCCAACA
GCACCGGCAGCAAGAAGAAGACGCCGGCCGCCAACCTGAGTCTGTCCAGTCAGATTGCTAGCAT
TGCTCGTTCTCCGGTGTCAGGCTGCGCAGTAAGGACATAAACTCGCGTGGTTGTTCCACGTCAG
GAGGCAATGTTTATTTCCTGTAGAAATCAAATATGCGTCTCGGCCCCGCCCCCCGACTTTGAGA
CTTGACCCCGGGGCACAGCACGCGAGCGCGTCGGTCCCAGACCCCCCAGCTCCTCCCACTAGTG
TTTTAAGCTGAGCTTCTTGTCCCAAGGTTTCCCTGTAATAATGTCAGCTGCTGTTCACAGGATG
TGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTGAGTTTGGGGACGAGGACGAAAGGCTAAT
CACTAGATTAGAAAACACGCAGTATGACGCGGCCAACGGCGTGGACGACGAGGAAGACTTCAAC
AGCCCCCCCGC

hide sequence

RefSeq Acc Id:

XM_014112593 ⟹ XP_013968068

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	3	63,508,963 - 63,883,319 (+)	NCBI
Dog10K_Boxer_Tasha	3	66,026,514 - 66,401,408 (+)	NCBI

Sequence:

show sequence

ATGTCCAGCACACCACATGACCCCTTCTATTCTTCTCCTTTCGGCCCATTTTATAGGAGACATA
CACCCTACATGGTACAGCCAGAGTACCGAATCTATGAGATGAACAAGAGACTGCAGTCTCGCAC
AGAGGATAGTGACAACCTTTGGTGGGACGCATTTGCCACCGAGTTTTTTGAAGACGATGCCACA
TTAACCCTTTCATTTTGTTTGGAAGATGGACCAAAGCGATACACTATCGGCAGGACCCTTATCC
CTCGTTATTTTAGCACTGTGTTTGAAGGAGGGGTGACCGACCTGTATTACATCCTCAAACACTC
TAAAGAGTCATACCACAACTCATCCATCACAGTGGACTGCGACCAGTGTGCTATGGTCACCCAG
CATGGGAAGCCCATGTTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTG
ATGATCTCATGAGAATAAAAACATGGCACTTTACCATTAGACAATACAGAGAGTTAGTCCCAAG
GAGCATTCTAGCCATGCATGCACAAGATCCTCAGGTCCTGGATCAGCTGTCCAAAAACATCACC
AGGATGGGACTAACAAATTTCACCCTCAACTACCTCAGGTTGTGTGTAATACTGGAGCCAATGC
AGGAACTGATGTCGAGACATAAAACTTACAACCTCAGTCCACGAGACTGCCTGAAGACCTGCTT
GTTTCAGAAGTGGCAGCGGATGGTGGCGCCGCCAGCAGAACCCACAAGGCAGCCGACAACCAAA
CGGAGAAAAAGGAAAAACTCTACCAGCAGCACTTCCAACAGCAGCGCCGGAAACAACGCCAACA
GCACCGGCAGCAAGAAGAAGACGCCGGCCGCCAACCTGAGTCTGTCCAGTCAGGGGCTAGGAGC
GATCCCGAACTGCAGCCTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAGCAGTGACC
CCTTCTGGCCAATTTAAGGAGAAGCATTGAGGGGCCCTGAAAGGAGTCACTTCCAGTCCTCCTC
AGAGATTGCTAGCATTGCTCGTTCTCCGGTGTCAGGCTGCGCAGTAAGGACATAAACTCGCGTG
GTTGTTCCACGTCAGGAGGCAATGTTTATTTCCTGTAGAAATCAAATATGCGTCTCGGCCCCGC
CCCCCGACTTTGAGACTTGACCCCGGGGCACAGCACGCGAGCGCGTCGGTCCCAGACCCCCCAG
CTCCTCCCACTAGTGTTTTAAGCTGAGCTTCTTGTCCCAAGGTTTCCCTGTAATAATGTCAGCT
GCTGTTCACAGGATGTGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTGAGTTTGGGGACGA
GGACGAAAGGCTAATCACTAGATTAGAAAACACGCAGTATGACGCGGCCAACGGCGTGGACGAC
GAGGAAGACTTCAACAGCCCCCCCGC

hide sequence

RefSeq Acc Id:

XM_022417148 ⟹ XP_022272856

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	3	63,611,312 - 63,883,842 (+)	NCBI
Dog10K_Boxer_Tasha	3	66,128,796 - 66,401,935 (+)	NCBI

Sequence:

show sequence

CCTGGAGGCAGGCAGATGATCTTCCTTCCAAGGTGTCATCAGAAAATTAGTAGTAGCCTAACAC
TGCGTCACAATGCCTACGTTATTTGCCTCACTTCCTGTCACCACGTAGGCATTTTATCATCTCA
CGTCATCCCAAGGAGAAGGGATAGTGACAACCTTTGGTGGGACGCATTTGCCACCGAGTTTTTT
GAAGACGATGCCACATTAACCCTTTCATTTTGTTTGGAAGATGGACCAAAGCGATACACTATCG
GCAGGACCCTTATCCCTCGTTATTTTAGCACTGTGTTTGAAGGAGGGGTGACCGACCTGTATTA
CATCCTCAAACACTCTAAAGAGTCATACCACAACTCATCCATCACAGTGGACTGCGACCAGTGT
GCTATGGTCACCCAGCATGGGAAGCCCATGTTTACCAAGGTATGTACAGAAGGCAGACTGATCT
TGGAGTTCACCTTTGATGATCTCATGAGAATAAAAACATGGCACTTTACCATTAGACAATACAG
AGAGTTAGTCCCAAGGAGCATTCTAGCCATGCATGCACAAGATCCTCAGGTCCTGGATCAGCTG
TCCAAAAACATCACCAGGATGGGACTAACAAATTTCACCCTCAACTACCTCAGGTTGTGTGTAA
TACTGGAGCCAATGCAGGAACTGATGTCGAGACATAAAACTTACAACCTCAGTCCACGAGACTG
CCTGAAGACCTGCTTGTTTCAGAAGTGGCAGCGGATGGTGGCGCCGCCAGCAGAACCCACAAGG
CAGCCGACAACCAAACGGAGAAAAAGGAAAAACTCTACCAGCAGCACTTCCAACAGCAGCGCCG
GAAACAACGCCAACAGCACCGGCAGCAAGAAGAAGACGCCGGCCGCCAACCTGAGTCTGTCCAG
TCAGGTACCTGATGTGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTGAGTTTGGGGACGAG
GACGAAAGGCTAATCACTAGATTAGAAAACACGCAGTATGACGCGGCCAACGGCGTGGACGACG
AGGAAGACTTCAACAGCCCCCCCGCCCTGGGGAACAGCAGCCCTTGGAGCAGTAAACCCCCCGC
CGCTCAGGAGACCAAATCAGAAAGCGCCCCGCCCCAGGCTCCCCAGTGAGACTGACCCGCACCC
GCACCCGGACCCGCACCCGCACCCGCACCCGCACCCCGTGGGCCGTGGGCCGTGGGCCGTGGGC
CGTGGGCTGCACCCACGCTTGCAGATCCCTGCTTACAGGAGAGGAAGGAGGCGAAATGAAAACT
TTTCCACGCAAAAACCTGTTTCTAAACCACAATGACCTGAGTTTTGAGTTTCTTTTCTTTCTTT
CTTTCTTTTCCTTTTTTTGTTTTTTGGGTTTTTTTTTTTTTTTTGGTCTTTTGAATGAGAGGTT
ATCCAATAAACTTTCATGACCCTTCCCTGGAGGCCTTCACAGGTAACGCAGAGACTGGCACTGA
TCGTAATTAAATCAAGAGGGCAGGCTCGCGCTTCTCCTGGCTCGGTGTTTAACCACATGTTTGT
TAACGACCCCCCCTAACCCCCCACCCCCACCCCCAC

hide sequence

RefSeq Acc Id:

XM_022417150 ⟹ XP_022272858

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	3	63,508,963 - 63,880,279 (+)	NCBI
Dog10K_Boxer_Tasha	3	66,026,514 - 66,398,367 (+)	NCBI

Sequence:

show sequence

ATGTCCAGCACACCACATGACCCCTTCTATTCTTCTCCTTTCGGCCCATTTTATAGGAGACATA
CACCCTACATGGTACAGCCAGAGTACCGAATCTATGAGATGAACAAGAGACTGCAGTCTCGCAC
AGAGGATAGTGACAACCTTTGGTGGGACGCATTTGCCACCGAGTTTTTTGAAGACGATGCCACA
TTAACCCTTTCATTTTGTTTGGAAGATGGACCAAAGCGATACACTATCGGCAGGACCCTTATCC
CTCGTTATTTTAGCACTGTGTTTGAAGGAGGGGTGACCGACCTGTATTACATCCTCAAACACTC
TAAAGAGTCATACCACAACTCATCCATCACAGTGGACTGCGACCAGTGTGCTATGGTCACCCAG
CATGGGAAGCCCATGTTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTG
ATGATCTCATGAGAATAAAAACATGGCACTTTACCATTAGACAATACAGAGAGTTAGTCCCAAG
GAGCATTCTAGCCATGCATGCACAAGATCCTCAGGTCCTGGATCAGCTGTCCAAAAACATCACC
AGGATGGGACTAACAAATTTCACCCTCAACTACCTCAGGTTGTGTGTAATACTGGAGCCAATGC
AGGAACTGATGTCGAGACATAAAACTTACAACCTCAGTCCACGAGACTGCCTGAAGACCTGCTT
GTTTCAGAAGTGGCAGCGGATGGTGGCGCCGCCAGAACCCACAAGGCAGCCGACAACCAAACGG
AGAAAAAGGAAAAACTCTACCAGCAGCACTTCCAACAGCAGCGCCGGAAACAACGCCAACAGCA
CCGGCAGCAAGAAGAAGACGCCGGCCGCCAACCTGAGTCTGTCCAGTCAGGTACCTGGGCTAGG
AGCGATCCCGAACTGCAGCCTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAGCAGTG
ACCCCTTCTGGCCAATTTAAGGAGAAGCATTGA

hide sequence

RefSeq Acc Id:

XM_038472337 ⟹ XP_038328265

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	3	63,476,789 - 63,852,008 (+)	NCBI

RefSeq Acc Id:

XM_038472338 ⟹ XP_038328266

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	3	63,579,386 - 63,852,008 (+)	NCBI

RefSeq Acc Id:

XM_038472339 ⟹ XP_038328267

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	3	63,476,565 - 63,852,008 (+)	NCBI

RefSeq Acc Id:

XM_038472340 ⟹ XP_038328268

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	3	63,476,789 - 63,851,560 (+)	NCBI

RefSeq Acc Id:

XM_038472341 ⟹ XP_038328269

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	3	63,476,789 - 63,851,473 (+)	NCBI

RefSeq Acc Id:

XM_038472342 ⟹ XP_038328270

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	3	63,476,789 - 63,851,463 (+)	NCBI

RefSeq Acc Id:

XM_038472343 ⟹ XP_038328271

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	3	63,476,789 - 63,848,433 (+)	NCBI

RefSeq Acc Id:

XM_038472344 ⟹ XP_038328272

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	3	63,476,789 - 63,851,473 (+)	NCBI

RefSeq Acc Id:

XM_038472345 ⟹ XP_038328273

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	3	63,476,789 - 63,851,473 (+)	NCBI

RefSeq Acc Id:

XM_038472346 ⟹ XP_038328274

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	3	63,476,789 - 63,851,473 (+)	NCBI

RefSeq Acc Id:

XM_038533313 ⟹ XP_038389241

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	3	64,040,341 - 64,415,250 (+)	NCBI

RefSeq Acc Id:

XM_038533314 ⟹ XP_038389242

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	3	64,142,648 - 64,415,250 (+)	NCBI

RefSeq Acc Id:

XM_038533315 ⟹ XP_038389243

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	3	64,040,117 - 64,415,250 (+)	NCBI

RefSeq Acc Id:

XM_038533316 ⟹ XP_038389244

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	3	64,040,341 - 64,414,828 (+)	NCBI

RefSeq Acc Id:

XM_038533317 ⟹ XP_038389245

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	3	64,040,341 - 64,414,741 (+)	NCBI

RefSeq Acc Id:

XM_038533318 ⟹ XP_038389246

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	3	64,040,341 - 64,414,731 (+)	NCBI

RefSeq Acc Id:

XM_038533319 ⟹ XP_038389247

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	3	64,040,341 - 64,411,700 (+)	NCBI

RefSeq Acc Id:

XM_038533320 ⟹ XP_038389248

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	3	64,040,341 - 64,414,741 (+)	NCBI

RefSeq Acc Id:

XM_038533321 ⟹ XP_038389249

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	3	64,040,341 - 64,414,741 (+)	NCBI

RefSeq Acc Id:

XM_038533322 ⟹ XP_038389250

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	3	64,040,341 - 64,414,741 (+)	NCBI

RefSeq Acc Id:

XM_038597641 ⟹ XP_038453569

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	3	63,680,614 - 64,055,540 (+)	NCBI

RefSeq Acc Id:

XM_038597642 ⟹ XP_038453570

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	3	63,783,010 - 64,055,540 (+)	NCBI

RefSeq Acc Id:

XM_038597643 ⟹ XP_038453571

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	3	63,680,390 - 64,055,540 (+)	NCBI

RefSeq Acc Id:

XM_038597644 ⟹ XP_038453572

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	3	63,680,614 - 64,055,111 (+)	NCBI

RefSeq Acc Id:

XM_038597645 ⟹ XP_038453573

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	3	63,680,614 - 64,055,024 (+)	NCBI

RefSeq Acc Id:

XM_038597646 ⟹ XP_038453574

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	3	63,680,614 - 64,055,014 (+)	NCBI

RefSeq Acc Id:

XM_038597647 ⟹ XP_038453575

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	3	63,680,614 - 64,051,983 (+)	NCBI

RefSeq Acc Id:

XM_038597648 ⟹ XP_038453576

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	3	63,680,614 - 64,055,024 (+)	NCBI

RefSeq Acc Id:

XM_038597649 ⟹ XP_038453577

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	3	63,680,614 - 64,055,024 (+)	NCBI

RefSeq Acc Id:

XM_038597650 ⟹ XP_038453578

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	3	63,680,614 - 64,055,024 (+)	NCBI

RefSeq Acc Id:

XM_038661822 ⟹ XP_038517750

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	3	63,985,817 - 64,361,307 (+)	NCBI

RefSeq Acc Id:

XM_038661823 ⟹ XP_038517751

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	3	64,088,444 - 64,361,307 (+)	NCBI

RefSeq Acc Id:

XM_038661824 ⟹ XP_038517752

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	3	63,985,593 - 64,361,307 (+)	NCBI

RefSeq Acc Id:

XM_038661825 ⟹ XP_038517753

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	3	63,985,817 - 64,360,866 (+)	NCBI

RefSeq Acc Id:

XM_038661826 ⟹ XP_038517754

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	3	63,985,817 - 64,360,779 (+)	NCBI

RefSeq Acc Id:

XM_038661827 ⟹ XP_038517755

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	3	63,985,817 - 64,360,769 (+)	NCBI

RefSeq Acc Id:

XM_038661828 ⟹ XP_038517756

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	3	63,985,817 - 64,357,738 (+)	NCBI

RefSeq Acc Id:

XM_038661829 ⟹ XP_038517757

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	3	63,985,817 - 64,360,779 (+)	NCBI

RefSeq Acc Id:

XM_038661830 ⟹ XP_038517758

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	3	63,985,817 - 64,360,779 (+)	NCBI

RefSeq Acc Id:

XM_038661831 ⟹ XP_038517759

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	3	63,985,817 - 64,360,779 (+)	NCBI

RefSeq Acc Id:

XM_536231 ⟹ XP_536231

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	3	63,508,963 - 63,883,308 (+)	NCBI
Dog10K_Boxer_Tasha	3	66,026,514 - 66,401,398 (+)	NCBI

Sequence:

show sequence

ATGTCCAGCACACCACATGACCCCTTCTATTCTTCTCCTTTCGGCCCATTTTATAGGAGACATA
CACCCTACATGGTACAGCCAGAGTACCGAATCTATGAGATGAACAAGAGACTGCAGTCTCGCAC
AGAGGATAGTGACAACCTTTGGTGGGACGCATTTGCCACCGAGTTTTTTGAAGACGATGCCACA
TTAACCCTTTCATTTTGTTTGGAAGATGGACCAAAGCGATACACTATCGGCAGGACCCTTATCC
CTCGTTATTTTAGCACTGTGTTTGAAGGAGGGGTGACCGACCTGTATTACATCCTCAAACACTC
TAAAGAGTCATACCACAACTCATCCATCACAGTGGACTGCGACCAGTGTGCTATGGTCACCCAG
CATGGGAAGCCCATGTTTACCAAGGTATGTACAGAAGGCAGACTGATCTTGGAGTTCACCTTTG
ATGATCTCATGAGAATAAAAACATGGCACTTTACCATTAGACAATACAGAGAGTTAGTCCCAAG
GAGCATTCTAGCCATGCATGCACAAGATCCTCAGGTCCTGGATCAGCTGTCCAAAAACATCACC
AGGATGGGACTAACAAATTTCACCCTCAACTACCTCAGGTTGTGTGTAATACTGGAGCCAATGC
AGGAACTGATGTCGAGACATAAAACTTACAACCTCAGTCCACGAGACTGCCTGAAGACCTGCTT
GTTTCAGAAGTGGCAGCGGATGGTGGCGCCGCCAGCAGAACCCACAAGGCAGCCGACAACCAAA
CGGAGAAAAAGGAAAAACTCTACCAGCAGCACTTCCAACAGCAGCGCCGGAAACAACGCCAACA
GCACCGGCAGCAAGAAGAAGACGCCGGCCGCCAACCTGAGTCTGTCCAGTCAGGTACCTGGGCT
AGGAGCGATCCCGAACTGCAGCCTCAACCCTGGGAGGGATGGAGACCTGTGTCATTCAACAGCA
GTGACCCCTTCTGGCCAATTTAAGGAGAAGCATTGAGGGGCCCTGAAAGGAGTCACTTCCAGTC
CTCCTCAGAGGATGTGATGGTGGTAGGAGAGCCAACTCTGATGGGAGGTGAGTTTGGGGACGAG
GACGAAAGGCTAATCACTAGATTAGAAAACACGCAGTATGACGCGGCCAACGGCGTGGACGACG
AGGAAGACTTCAAC

hide sequence

Protein Sequences


Protein RefSeqs	XP_005618601	(Get FASTA)	NCBI Sequence Viewer
	XP_005618602	(Get FASTA)	NCBI Sequence Viewer
	XP_005618603	(Get FASTA)	NCBI Sequence Viewer
	XP_005618605	(Get FASTA)	NCBI Sequence Viewer
	XP_005618608	(Get FASTA)	NCBI Sequence Viewer
	XP_005618609	(Get FASTA)	NCBI Sequence Viewer
	XP_013968068	(Get FASTA)	NCBI Sequence Viewer
	XP_022272856	(Get FASTA)	NCBI Sequence Viewer
	XP_022272858	(Get FASTA)	NCBI Sequence Viewer
	XP_038328265	(Get FASTA)	NCBI Sequence Viewer
	XP_038328266	(Get FASTA)	NCBI Sequence Viewer
	XP_038328267	(Get FASTA)	NCBI Sequence Viewer
	XP_038328268	(Get FASTA)	NCBI Sequence Viewer
	XP_038328269	(Get FASTA)	NCBI Sequence Viewer
	XP_038328270	(Get FASTA)	NCBI Sequence Viewer
	XP_038328271	(Get FASTA)	NCBI Sequence Viewer
	XP_038328272	(Get FASTA)	NCBI Sequence Viewer
	XP_038328273	(Get FASTA)	NCBI Sequence Viewer
	XP_038328274	(Get FASTA)	NCBI Sequence Viewer
	XP_038389241	(Get FASTA)	NCBI Sequence Viewer
	XP_038389242	(Get FASTA)	NCBI Sequence Viewer
	XP_038389243	(Get FASTA)	NCBI Sequence Viewer
	XP_038389244	(Get FASTA)	NCBI Sequence Viewer
	XP_038389245	(Get FASTA)	NCBI Sequence Viewer
	XP_038389246	(Get FASTA)	NCBI Sequence Viewer
	XP_038389247	(Get FASTA)	NCBI Sequence Viewer
	XP_038389248	(Get FASTA)	NCBI Sequence Viewer
	XP_038389249	(Get FASTA)	NCBI Sequence Viewer
	XP_038389250	(Get FASTA)	NCBI Sequence Viewer
	XP_038453569	(Get FASTA)	NCBI Sequence Viewer
	XP_038453570	(Get FASTA)	NCBI Sequence Viewer
	XP_038453571	(Get FASTA)	NCBI Sequence Viewer
	XP_038453572	(Get FASTA)	NCBI Sequence Viewer
	XP_038453573	(Get FASTA)	NCBI Sequence Viewer
	XP_038453574	(Get FASTA)	NCBI Sequence Viewer
	XP_038453575	(Get FASTA)	NCBI Sequence Viewer
	XP_038453576	(Get FASTA)	NCBI Sequence Viewer
	XP_038453577	(Get FASTA)	NCBI Sequence Viewer
	XP_038453578	(Get FASTA)	NCBI Sequence Viewer
	XP_038517750	(Get FASTA)	NCBI Sequence Viewer
	XP_038517751	(Get FASTA)	NCBI Sequence Viewer
	XP_038517752	(Get FASTA)	NCBI Sequence Viewer
	XP_038517753	(Get FASTA)	NCBI Sequence Viewer
	XP_038517754	(Get FASTA)	NCBI Sequence Viewer
	XP_038517755	(Get FASTA)	NCBI Sequence Viewer
	XP_038517756	(Get FASTA)	NCBI Sequence Viewer
	XP_038517757	(Get FASTA)	NCBI Sequence Viewer
	XP_038517758	(Get FASTA)	NCBI Sequence Viewer
	XP_038517759	(Get FASTA)	NCBI Sequence Viewer
	XP_536231	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000046020.2
	ENSCAFP00000052907.2
	ENSCAFP00030005315.1
	ENSCAFP00030005330.1
	ENSCAFP00030005344.1
	ENSCAFP00040017154.1
	ENSCAFP00040017238.1
	ENSCAFP00040017374.1
	ENSCAFP00845000898
	ENSCAFP00845000898.1
	ENSCAFP00845000907
	ENSCAFP00845000907.1

RefSeq Acc Id:	XP_005618601 ⟸ XM_005618544
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KI35 (UniProtKB/TrEMBL), A0A8C0M2G7 (UniProtKB/TrEMBL), A0A8C0YV12 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSTPHDPFYSSPFGPFYRRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLWWDAFATEFFEDDAT LTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQCAMVTQ HGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMHAQDPQVLDQLSKNIT RMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPAEPTRQPTTK RRKRKNSTSSTSNSSAGNNANSTGSKKKTPAANLSLSSQVPDVMVVGEPTLMGGEFGDEDERLI TRLENTQYDAANGVDDEEDFNSPPALGNSSPWSSKPPAAQETKSESAPPQAPQ hide sequence

RefSeq Acc Id:	XP_005618603 ⟸ XM_005618546
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0YV12 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSTPHDPFYSSPFGPFYRRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLWWDAFATEFFEDDAT LTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQCAMVTQ HGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMHAQDPQVLDQLSKNIT RMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPAEPTRQPTTK RRKRKNSTSSTSNSSAGNNANSTGSKKKTPAANLSLSSQDVMVVGEPTLMGGEFGDEDERLITR LENTQYDAANGVDDEEDFNSPPALGNSSPWSSKPPAAQETKSESAPPQAPQ hide sequence

RefSeq Acc Id:	XP_005618602 ⟸ XM_005618545
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0YV12 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSTPHDPFYSSPFGPFYRRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLWWDAFATEFFEDDAT LTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQCAMVTQ HGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMHAQDPQVLDQLSKNIT RMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPEPTRQPTTKR RKRKNSTSSTSNSSAGNNANSTGSKKKTPAANLSLSSQVPDVMVVGEPTLMGGEFGDEDERLIT RLENTQYDAANGVDDEEDFNSPPALGNSSPWSSKPPAAQETKSESAPPQAPQ hide sequence

RefSeq Acc Id:	XP_005618605 ⟸ XM_005618548
- Peptide Label:	isoform X5
- UniProtKB:	A0A8C0YV09 (UniProtKB/TrEMBL), A0A8I3MII0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSTPHDPFYSSPFGPFYRRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLWWDAFATEFFEDDAT LTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQCAMVTQ HGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMHAQDPQVLDQLSKNIT RMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPAEPTRQPTTK RRKRKNSTSSTSNSSAGNNANSTGSKKKTPAANLSLSSQVPGLGAIPNCSLNPGRDGDLCHSTA VTPSGQFKEKH hide sequence

RefSeq Acc Id:	XP_005618608 ⟸ XM_005618551
- Peptide Label:	isoform X8
- UniProtKB:	A0A8C0S860 (UniProtKB/TrEMBL), A0A8I3MWU4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSTPHDPFYSSPFGPFYRRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLWWDAFATEFFEDDAT LTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQCAMVTQ HGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMHAQDPQVLDQLSKNIT RMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPAEPTRQPTTK RRKRKNSTSSTSNSSAGNNANSTGSKKKTPAANLSLSSQVPIASIARSPVSGCAVRT hide sequence

RefSeq Acc Id:

XP_013968068 ⟸ XM_014112593

- Peptide Label:

isoform X7

- Sequence:

show sequence

MSSTPHDPFYSSPFGPFYRRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLWWDAFATEFFEDDAT
LTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQCAMVTQ
HGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMHAQDPQVLDQLSKNIT
RMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPAEPTRQPTTK
RRKRKNSTSSTSNSSAGNNANSTGSKKKTPAANLSLSSQGLGAIPNCSLNPGRDGDLCHSTAVT
PSGQFKEKH

hide sequence

RefSeq Acc Id:

XP_005618609 ⟸ XM_005618552

- Peptide Label:

isoform X9

- Sequence:

show sequence

MSSTPHDPFYSSPFGPFYRRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLWWDAFATEFFEDDAT
LTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQCAMVTQ
HGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMHAQDPQVLDQLSKNIT
RMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPAEPTRQPTTK
RRKRKNSTSSTSNSSAGNNANSTGSKKKTPAANLSLSSQIASIARSPVSGCAVRT

hide sequence

RefSeq Acc Id:	XP_536231 ⟸ XM_536231
- Peptide Label:	isoform X5
- UniProtKB:	A0A8C0YV09 (UniProtKB/TrEMBL), A0A8I3MII0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSTPHDPFYSSPFGPFYRRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLWWDAFATEFFEDDAT LTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQCAMVTQ HGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMHAQDPQVLDQLSKNIT RMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPAEPTRQPTTK RRKRKNSTSSTSNSSAGNNANSTGSKKKTPAANLSLSSQVPGLGAIPNCSLNPGRDGDLCHSTA VTPSGQFKEKH hide sequence

RefSeq Acc Id:	XP_022272858 ⟸ XM_022417150
- Peptide Label:	isoform X6
- UniProtKB:	A0A8C0KGX0 (UniProtKB/TrEMBL), A0A8C0M874 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSTPHDPFYSSPFGPFYRRHTPYMVQPEYRIYEMNKRLQSRTEDSDNLWWDAFATEFFEDDAT LTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQCAMVTQ HGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMHAQDPQVLDQLSKNIT RMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPEPTRQPTTKR RKRKNSTSSTSNSSAGNNANSTGSKKKTPAANLSLSSQVPGLGAIPNCSLNPGRDGDLCHSTAV TPSGQFKEKH hide sequence

RefSeq Acc Id:	XP_022272856 ⟸ XM_022417148
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0YV12 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIFLPRCHQKISSSLTLRHNAYVICLTSCHHVGILSSHVIPRRRDSDNLWWDAFATEFFEDDAT LTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQCAMVTQ HGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMHAQDPQVLDQLSKNIT RMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPAEPTRQPTTK RRKRKNSTSSTSNSSAGNNANSTGSKKKTPAANLSLSSQVPDVMVVGEPTLMGGEFGDEDERLI TRLENTQYDAANGVDDEEDFNSPPALGNSSPWSSKPPAAQETKSESAPPQAPQ hide sequence

RefSeq Acc Id:

ENSCAFP00000022316 ⟸ ENSCAFT00000024036

RefSeq Acc Id:

ENSCAFP00000046020 ⟸ ENSCAFT00000093701

RefSeq Acc Id:

ENSCAFP00000052907 ⟸ ENSCAFT00000082696

RefSeq Acc Id:

ENSCAFP00000048663 ⟸ ENSCAFT00000082639

RefSeq Acc Id:	XP_038328267 ⟸ XM_038472339
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038328265 ⟸ XM_038472337
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038328268 ⟸ XM_038472340
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038328269 ⟸ XM_038472341
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038328273 ⟸ XM_038472345
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038328272 ⟸ XM_038472344
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038328274 ⟸ XM_038472346
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_038328270 ⟸ XM_038472342
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038328271 ⟸ XM_038472343
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038328266 ⟸ XM_038472338
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038453571 ⟸ XM_038597643
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038453569 ⟸ XM_038597641
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038453572 ⟸ XM_038597644
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038453573 ⟸ XM_038597645
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038453577 ⟸ XM_038597649
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038453576 ⟸ XM_038597648
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038453578 ⟸ XM_038597650
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_038453574 ⟸ XM_038597646
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038453575 ⟸ XM_038597647
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038453570 ⟸ XM_038597642
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038517752 ⟸ XM_038661824
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0YV12 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038517750 ⟸ XM_038661822
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0M2G7 (UniProtKB/TrEMBL), A0A8C0KI35 (UniProtKB/TrEMBL), A0A8C0YV12 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038517753 ⟸ XM_038661825
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0YV12 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038517754 ⟸ XM_038661826
- Peptide Label:	isoform X5
- UniProtKB:	A0A8C0YV09 (UniProtKB/TrEMBL), A0A8I3MII0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038517758 ⟸ XM_038661830
- Peptide Label:	isoform X8
- UniProtKB:	A0A8C0S860 (UniProtKB/TrEMBL), A0A8I3MWU4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038517757 ⟸ XM_038661829
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038517759 ⟸ XM_038661831
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_038517755 ⟸ XM_038661827
- Peptide Label:	isoform X5
- UniProtKB:	A0A8C0YV09 (UniProtKB/TrEMBL), A0A8I3MII0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038517756 ⟸ XM_038661828
- Peptide Label:	isoform X6
- UniProtKB:	A0A8C0KGX0 (UniProtKB/TrEMBL), A0A8C0M874 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038517751 ⟸ XM_038661823
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0YV12 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038389243 ⟸ XM_038533315
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0YV12 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038389241 ⟸ XM_038533313
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KI35 (UniProtKB/TrEMBL), A0A8C0M2G7 (UniProtKB/TrEMBL), A0A8C0YV12 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038389244 ⟸ XM_038533316
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0YV12 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038389245 ⟸ XM_038533317
- Peptide Label:	isoform X5
- UniProtKB:	A0A8C0YV09 (UniProtKB/TrEMBL), A0A8I3MII0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038389249 ⟸ XM_038533321
- Peptide Label:	isoform X8
- UniProtKB:	A0A8C0S860 (UniProtKB/TrEMBL), A0A8I3MWU4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038389248 ⟸ XM_038533320
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038389250 ⟸ XM_038533322
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_038389246 ⟸ XM_038533318
- Peptide Label:	isoform X5
- UniProtKB:	A0A8C0YV09 (UniProtKB/TrEMBL), A0A8I3MII0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038389247 ⟸ XM_038533319
- Peptide Label:	isoform X6
- UniProtKB:	A0A8C0KGX0 (UniProtKB/TrEMBL), A0A8C0M874 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038389242 ⟸ XM_038533314
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0YV12 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845000898 ⟸ ENSCAFT00845001176

RefSeq Acc Id:

ENSCAFP00845000907 ⟸ ENSCAFT00845001188

Protein Domains

LIM interaction

Promoters

RGD ID:

13682814

Promoter ID:

EPDNEW_C881

Type:

initiation region

Name:

LDB2_1

Description:

LIM domain binding 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	3	63,508,782 - 63,508,842	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000015135	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030003166	UniProtKB/TrEMBL
	ENSCAFG00040010359	UniProtKB/TrEMBL
	ENSCAFG00845000708	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000082696.2	UniProtKB/TrEMBL
	ENSCAFT00000093701.2	UniProtKB/TrEMBL
	ENSCAFT00030006019.1	UniProtKB/TrEMBL
	ENSCAFT00030006036.1	UniProtKB/TrEMBL
	ENSCAFT00030006052.1	UniProtKB/TrEMBL
	ENSCAFT00040019767.1	UniProtKB/TrEMBL
	ENSCAFT00040019869.1	UniProtKB/TrEMBL
	ENSCAFT00040020024.1	UniProtKB/TrEMBL
	ENSCAFT00845001176	ENTREZGENE
	ENSCAFT00845001176.1	UniProtKB/TrEMBL
	ENSCAFT00845001188	ENTREZGENE
	ENSCAFT00845001188.1	UniProtKB/TrEMBL
Gene3D-CATH	Cysteine Rich Protein	UniProtKB/TrEMBL
InterPro	LID	UniProtKB/TrEMBL
	LIM-bd/SEUSS	UniProtKB/TrEMBL
KEGG Report	cfa:479084	UniProtKB/TrEMBL
NCBI Gene	LDB2	ENTREZGENE
PANTHER	PTHR10378	UniProtKB/TrEMBL
	PTHR10378:SF8	UniProtKB/TrEMBL
Pfam	LID	UniProtKB/TrEMBL
	LIM_bind	UniProtKB/TrEMBL
PROSITE	LID	UniProtKB/TrEMBL
UniProt	A0A8C0KGX0	ENTREZGENE
	A0A8C0KI35	ENTREZGENE
	A0A8C0M2G7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0M874	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0S860	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0YV09	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0YV12	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MII0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MWU4	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:42619	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar